Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold315G48373 Striga asiatica HOM05D032627 ORTHO05D051391 5.4e-69 264.2 137 100.0
SGA_v2.0_scaffold315G48368 Striga asiatica HOM05D032627 ORTHO05D051391 3.3e-50 201.8 121 85.1
FAN22G2204 Fragaria x ananassa HOM05D001377 ORTHO05D001221 8.3e-17 90.9 157 40.8
SGA_v2.0_scaffold315G48372 Striga asiatica HOM05D032627 ORTHO05D001221 1.6e-15 86.7 51 86.3
MSTRG.810 Avicennia marina HOM05D001377 ORTHO05D001221 7.5e-10 67.8 75 52.0
SGA_v2.0_scaffold36G14511 Striga asiatica HOM05D001377 ORTHO05D001221 9.8e-10 67.4 127 39.4
TWI79G1631 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 3.1e-08 62.4 78 46.2
Potri.008G114800 Populus trichocarpa HOM05D001377 ORTHO05D001221 9.1e-08 60.8 76 48.7
Actinidia16605 Actinidia chinensis HOM05D001377 ORTHO05D001221 1.2e-07 60.5 75 45.3
SalBow8G4999 Salvia bowleyana HOM05D001377 ORTHO05D001221 1.2e-07 60.5 49 61.2
Peaxi162Scf00004g10118 Petunia axillaris HOM05D001377 ORTHO05D001221 1.6e-07 60.1 73 43.8
AUR62007744 Chenopodium quinoa HOM05D001377 ORTHO05D001221 2.0e-07 59.7 94 38.3
Hma1.2p1_0605F.1_g187860 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 2.0e-07 59.7 75 45.3
Sabra08G0087000 Salix brachista HOM05D001377 ORTHO05D001221 2.7e-07 59.3 76 47.4
Migut.L01107 Erythranthe guttata HOM05D001377 ORTHO05D001221 5.9e-07 58.2 49 61.2
Oeu041875.1 Olea europaea HOM05D001377 ORTHO05D001221 5.9e-07 58.2 79 44.3
Dinv05807 Davidia involucrata HOM05D001377 ORTHO05D001221 7.7e-07 57.8 75 44.0
Ah.03g138000 Amaranthus hybridus HOM05D001377 ORTHO05D001221 1.0e-06 57.4 119 33.6
Cc11_g10760 Coffea canephora HOM05D001377 ORTHO05D001221 1.0e-06 57.4 51 56.9
AUR62002935 Chenopodium quinoa HOM05D001377 ORTHO05D001221 1.7e-06 56.6 134 30.6
Ciclev10030538m.g Citrus clementina HOM05D001377 ORTHO05D001221 1.7e-06 56.6 73 42.5
Manes.06G074000 Manihot esculenta HOM05D001377 ORTHO05D001221 1.7e-06 56.6 78 43.6
RcHm_v2.0_Chr7g0226101 Rosa chinensis HOM05D001377 ORTHO05D001221 1.7e-06 56.6 145 31.7
TWI31G1272 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 1.7e-06 56.6 49 57.1
CSS0008376 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 2.3e-06 56.2 75 42.7
Hund05774 Selenicereus undatus HOM05D001377 ORTHO05D001221 2.3e-06 56.2 59 50.8
Lj6C767T7 Lonicera japonica HOM05D001377 ORTHO05D001221 2.9e-06 55.8 49 53.1
CsaV3_5G028920 Cucumis sativus L. HOM05D001377 ORTHO05D001221 5.0e-06 55.1 126 32.5
FAN17G1780 Fragaria x ananassa HOM05D001377 ORTHO05D001221 6.6e-06 54.7 78 42.3
THA.LOC104825719 Tarenaya hassleriana HOM05D001377 ORTHO05D001221 6.6e-06 54.7 49 55.1
Dinv16523 Davidia involucrata HOM05D001377 ORTHO05D001221 8.6e-06 54.3 75 42.7


User provided reference genes

Program Settings