Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold315G48369 Striga asiatica HOM05D000014 ORTHO05D000093 4.6e-68 261.2 137 100.0
SGA_v2.0_scaffold449G51799 Striga asiatica HOM05D000014 ORTHO05D000093 8.7e-67 256.9 137 98.5
SGA_v2.0_scaffold107G30783 Striga asiatica HOM05D000014 ORTHO05D000016 2.6e-47 192.2 141 73.0
SGA_v2.0_scaffold55G19891 Striga asiatica HOM05D000014 ORTHO05D000093 3.4e-47 191.8 141 75.2
SGA_v2.0_scaffold53G19372 Striga asiatica HOM05D000014 ORTHO05D000093 5.0e-46 188.0 141 71.6
SGA_v2.0_scaffold336G49156 Striga asiatica HOM05D000014 ORTHO05D000093 1.1e-45 186.8 141 70.9
SGA_v2.0_scaffold41G15734 Striga asiatica HOM05D000014 ORTHO05D000093 3.9e-43 178.3 141 69.5
SGA_v2.0_scaffold174G39228 Striga asiatica HOM05D000014 ORTHO05D000016 5.1e-43 177.9 141 70.2
SGA_v2.0_scaffold742G53548 Striga asiatica HOM05D000014 ORTHO05D000093 1.1e-40 170.2 141 66.7
SGA_v2.0_scaffold129G34168 Striga asiatica HOM05D000014 ORTHO05D000093 1.2e-39 166.8 129 72.1
SGA_v2.0_scaffold36G14531 Striga asiatica HOM05D000014 ORTHO05D000016 2.0e-39 166.0 141 64.5
SGA_v2.0_scaffold220G42600 Striga asiatica HOM05D000014 ORTHO05D000016 5.5e-37 157.9 141 61.7
SGA_v2.0_scaffold125G33721 Striga asiatica HOM05D000014 ORTHO05D000093 6.1e-36 154.5 141 61.7
SGA_v2.0_scaffold112G31687 Striga asiatica HOM05D000014 ORTHO05D000093 5.1e-35 151.4 128 67.2
SGA_v2.0_scaffold164G38159 Striga asiatica HOM05D000014 ORTHO05D000016 4.4e-34 148.3 142 59.9
SGA_v2.0_scaffold368G50086 Striga asiatica HOM05D000014 ORTHO05D000093 6.3e-33 144.4 141 60.3
SGA_v2.0_scaffold16G07603 Striga asiatica HOM05D000014 ORTHO05D000016 1.8e-32 142.9 141 63.8
SGA_v2.0_scaffold174G39237 Striga asiatica HOM05D000014 ORTHO05D000016 4.1e-32 141.7 120 66.7
SGA_v2.0_scaffold284G47025 Striga asiatica HOM05D000014 ORTHO05D000093 2.0e-31 139.4 141 58.2
SGA_v2.0_scaffold59G20760 Striga asiatica HOM05D000014 ORTHO05D000093 3.5e-31 138.7 115 66.1
SGA_v2.0_scaffold63G21782 Striga asiatica HOM05D000014 ORTHO05D000016 1.3e-25 120.2 107 66.4
SGA_v2.0_scaffold86G26864 Striga asiatica HOM05D000014 ORTHO05D000016 7.0e-24 114.4 141 51.1
SGA_v2.0_scaffold38G15141 Striga asiatica HOM05D000014 ORTHO05D000093 8.5e-14 80.9 56 75.0
TWI32G0335 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 3.2e-13 79.0 168 37.5
TWI77G0341 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 4.2e-13 78.6 168 37.5
TWI09G0144 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.6e-12 76.6 168 36.3
TWI36G0746 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.6e-12 76.6 168 36.3
TWI53G0344 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 2.7e-12 75.9 168 34.5
TWI63G1826 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.4e-11 73.6 168 35.7
ECA240G0290 Erigeron canadensis HOM05D000014 ORTHO05D000016 6.3e-09 64.7 137 36.5
ECA236G1234 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.3e-09 64.3 146 35.6
ECA233G2604 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.4e-08 63.5 93 46.2
FvH4_7g22571 Fragaria vesca HOM05D000014 ORTHO05D000016 2.4e-08 62.8 149 30.9
TWI27G0002 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 2.4e-08 62.8 173 33.5
arahy.Tifrunner.gnm1.ann1.54GGN4 Arachis hypogaea HOM05D000014 ORTHO05D000093 4.1e-08 62.0 73 45.2
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 4.1e-08 62.0 164 33.5
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 4.1e-08 62.0 164 33.5
PGR044G0742 Punica granatum HOM05D000014 ORTHO05D000093 4.1e-08 62.0 164 33.5
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 4.1e-08 62.0 164 33.5
arahy.Tifrunner.gnm1.ann1.HZP7J5 Arachis hypogaea HOM05D000014 ORTHO05D000093 5.4e-08 61.6 49 59.2
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 5.4e-08 61.6 164 32.9
TWI81G0801 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.0e-08 61.2 170 32.9
CANSAT25G1400 Cannabis sativa HOM05D000014 ORTHO05D000016 9.1e-08 60.8 172 32.6
FvH4_4g15807 Fragaria vesca HOM05D000014 ORTHO05D000093 1.2e-07 60.5 49 61.2
CANSAT78G0807 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-07 60.1 137 34.3
Ca_05339_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.7e-07 59.3 146 34.9
CANSAT25G0697 Cannabis sativa HOM05D000014 ORTHO05D000093 3.5e-07 58.9 137 34.3
SGA_v2.0_scaffold268G46218 Striga asiatica HOM05D000014 ORTHO05D402221 3.5e-07 58.9 55 52.7
PGR042G1222 Punica granatum HOM05D000014 ORTHO05D000093 4.5e-07 58.5 164 32.9
CANSAT25G1170 Cannabis sativa HOM05D000014 ORTHO05D000093 5.9e-07 58.2 172 32.0
ECA248G1978 Erigeron canadensis HOM05D000014 ORTHO05D000093 5.9e-07 58.2 147 28.6
TPR.G33107 Trifolium pratense HOM05D000014 ORTHO05D000016 5.9e-07 58.2 46 58.7
arahy.Tifrunner.gnm1.ann1.41XP9B Arachis hypogaea HOM05D000014 ORTHO05D000093 7.7e-07 57.8 147 32.0
ECA247G0101 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.7e-07 57.8 105 37.1
Ca_01956_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.0e-06 57.4 65 49.2
Ca_03809_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.0e-06 57.4 89 38.2
ECA048G0001 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 52 55.8
ECA232G2166 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA232G4102 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA232G4103 Erigeron canadensis HOM05D000508 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA233G0126 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.6
ECA233G1610 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 52 55.8
ECA233G2865 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA233G3560 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 52 55.8
ECA238G1422 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA238G1743 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 52 55.8
ECA240G1231 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA240G3545 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA247G3828 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA247G4111 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA289G0002 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
ECA294G0001 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.0e-06 57.4 171 31.0
CANSAT89G0007 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-06 57.0 172 30.2
ECA111G0002 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 171 30.4
ECA232G3605 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 171 31.0
ECA236G1890 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 171 31.0
ECA246G0041 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 171 30.4
ECA246G4324 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 156 27.6
FvH4_4g05352 Fragaria vesca HOM05D000014 ORTHO05D000016 1.3e-06 57.0 107 36.4
VMungo1127G0225 Vigna mungo HOM05D000014 ORTHO05D000093 1.3e-06 57.0 49 55.1
ECA233G6256 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.7e-06 56.6 150 30.0
ECA236G3794 Erigeron canadensis HOM05D000004 ORTHO05D000093 1.7e-06 56.6 103 33.0
ECA232G3687 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.3e-06 56.2 171 31.0
ECA233G0374 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.3e-06 56.2 52 55.8
Oeu012541.1 Olea europaea HOM05D000014 ORTHO05D000016 2.3e-06 56.2 61 45.9
Oeu057590.2 Olea europaea HOM05D000014 ORTHO05D000093 2.3e-06 56.2 49 57.1
RcHm_v2.0_Chr3g0495801 Rosa chinensis HOM05D000014 ORTHO05D000093 2.3e-06 56.2 158 32.3
VMungo0647G1147 Vigna mungo HOM05D000014 ORTHO05D000093 2.3e-06 56.2 97 41.2
ECA233G0046 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.9e-06 55.8 103 32.0
ECA234G3272 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.9e-06 55.8 109 33.9
ECA238G0285 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.9e-06 55.8 171 31.0
ECA246G2918 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.9e-06 55.8 171 31.0
Manes.07G008991 Manihot esculenta HOM05D000014 ORTHO05D000016 2.9e-06 55.8 51 54.9
Ca_04882_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.8e-06 55.5 172 26.7
Ca_26650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 3.8e-06 55.5 89 38.2
ECA236G2702 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.8e-06 55.5 103 33.0
arahy.Tifrunner.gnm1.ann1.WTDW08 Arachis hypogaea HOM05D000014 ORTHO05D000093 5.0e-06 55.1 149 29.5
CANSAT25G0190 Cannabis sativa HOM05D000014 ORTHO05D000016 5.0e-06 55.1 172 31.4
ECA246G4603 Erigeron canadensis HOM05D000014 ORTHO05D000093 5.0e-06 55.1 103 32.0
ECA247G3973 Erigeron canadensis HOM05D000014 ORTHO05D000093 5.0e-06 55.1 87 36.8
FvH4_4g08761 Fragaria vesca HOM05D000014 ORTHO05D000093 5.0e-06 55.1 44 59.1
PSO170G5704 Papaver somniferum HOM05D000014 ORTHO05D000016 5.0e-06 55.1 145 31.0
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 5.0e-06 55.1 49 55.1
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 5.0e-06 55.1 49 55.1
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 5.0e-06 55.1 49 55.1
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 5.0e-06 55.1 49 55.1
Sopen09g012870 Solanum pennellii HOM05D000014 ORTHO05D000016 5.0e-06 55.1 74 44.6
arahy.Tifrunner.gnm1.ann1.HPUT0C Arachis hypogaea HOM05D000014 ORTHO05D000093 6.6e-06 54.7 144 33.3
CANSAT01G0796 Cannabis sativa HOM05D000014 ORTHO05D000093 6.6e-06 54.7 136 35.3
Ca_26711_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.6e-06 54.7 88 37.5
ClCG01G011220 Citrullus lanatus HOM05D000014 ORTHO05D000016 6.6e-06 54.7 122 36.9
ECA233G3079 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.6e-06 54.7 114 31.6
ECA233G3573 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.6e-06 54.7 82 36.6
ECA234G0264 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.6e-06 54.7 98 35.7
ECA236G0248 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.6e-06 54.7 86 37.2
ECA247G2016 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.6e-06 54.7 171 30.4
FvH4_7g12351 Fragaria vesca HOM05D000014 ORTHO05D000016 6.6e-06 54.7 49 51.0
arahy.Tifrunner.gnm1.ann1.AX29LC Arachis hypogaea HOM05D000014 ORTHO05D000093 8.6e-06 54.3 48 58.3
ECA232G1448 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.6e-06 54.3 171 30.4
ECA236G3420 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.6e-06 54.3 171 29.2
ECA238G1304 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.6e-06 54.3 171 30.4
ECA240G1719 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.6e-06 54.3 86 38.4
ECA248G2006 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.6e-06 54.3 103 33.0
FvH4_1g09710 Fragaria vesca HOM05D000014 ORTHO05D000093 8.6e-06 54.3 49 51.0
FvH4_3g26051 Fragaria vesca HOM05D000014 ORTHO05D000093 8.6e-06 54.3 49 51.0
HanXRQChr09g0269561 Helianthus annuus HOM05D000014 ORTHO05D000093 8.6e-06 54.3 79 46.8


User provided reference genes

Program Settings