Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 9.6e-124 446.8 223 100.0
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 4.2e-79 298.5 246 67.9
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 2.1e-70 269.6 232 62.9
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 3.6e-62 242.3 213 59.6
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 8.9e-61 237.7 246 57.3
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.3e-59 233.8 246 56.5
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 1.3e-59 233.8 246 56.5
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 2.4e-58 229.6 243 55.1
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 7.0e-58 228.0 251 53.8
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.6e-57 226.9 220 59.1
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 2.0e-57 226.5 236 54.7
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 3.5e-57 225.7 211 55.9
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 3.0e-56 222.6 249 55.4
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 3.9e-56 222.2 217 55.3
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.1e-55 220.7 215 56.7
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 1.1e-55 220.7 221 54.8
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 5.6e-55 218.4 223 58.3
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.6e-54 216.9 203 55.7
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 3.6e-54 215.7 204 56.4
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 4.7e-54 215.3 220 54.1
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 4.7e-54 215.3 234 54.7
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 6.2e-54 214.9 215 55.3
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 6.2e-54 214.9 221 53.4
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 6.2e-54 214.9 232 53.9
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 1.1e-53 214.2 218 55.5
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.4e-53 213.8 207 57.5
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.4e-53 213.8 231 52.8
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 3.1e-53 212.6 184 62.0
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 5.2e-53 211.8 240 52.5
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 6.8e-53 211.5 197 56.9
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.2e-52 210.7 210 54.8
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.5e-52 210.3 217 52.5
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 3.4e-52 209.1 211 53.6
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 5.8e-52 208.4 210 53.8
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 9.8e-52 207.6 202 54.0
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 1.3e-51 207.2 187 58.8
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 1.7e-51 206.8 178 58.4
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 2.2e-51 206.5 170 61.2
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 3.7e-51 205.7 233 51.5
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 4.9e-51 205.3 220 51.8
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 4.9e-51 205.3 209 53.6
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 4.9e-51 205.3 245 49.8
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 6.4e-51 204.9 186 55.4
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 8.3e-51 204.5 166 62.0
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 8.3e-51 204.5 171 61.4
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.1e-50 204.1 178 61.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.4e-50 203.8 228 51.3
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.9e-50 203.4 287 46.0
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.4e-50 203.0 226 53.5
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 3.2e-50 202.6 225 53.3
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 4.1e-50 202.2 198 56.1
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 4.1e-50 202.2 243 51.0
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 5.4e-50 201.8 233 49.8
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 7.1e-50 201.4 236 50.0
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.6e-49 200.3 194 53.1
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.6e-49 200.3 224 52.2
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.5e-49 199.1 186 57.5
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.6e-49 198.7 191 57.1
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 4.6e-49 198.7 224 53.1
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.3e-48 197.2 261 47.1
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 3.0e-48 196.1 156 63.5
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 3.9e-48 195.7 247 47.8
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 5.1e-48 195.3 225 49.3
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 5.1e-48 195.3 173 59.0
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.6e-48 194.9 245 48.6
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.9e-47 193.4 194 53.6
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 4.3e-47 192.2 201 52.2
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 4.3e-47 192.2 239 48.1
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.6e-47 191.8 159 61.6
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 5.6e-47 191.8 239 47.7
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 7.3e-47 191.4 188 54.8
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 7.3e-47 191.4 209 50.2
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.6e-46 190.3 177 52.5
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.1e-46 189.9 157 61.8
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.1e-46 189.9 159 61.0
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 2.8e-46 189.5 177 57.6
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 2.8e-46 189.5 162 59.9
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 2.8e-46 189.5 162 59.9
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.6e-46 189.1 163 60.7
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 6.2e-46 188.3 158 60.1
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 8.1e-46 188.0 128 68.0
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 8.1e-46 188.0 128 68.0
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.1e-45 187.6 244 47.1
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.4e-45 187.2 170 57.1
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 2.3e-45 186.4 173 59.0
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 5.2e-45 185.3 248 47.6
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.6e-44 183.0 205 50.2
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 3.4e-44 182.6 156 61.5
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.4e-44 182.6 237 46.8
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 5.8e-44 181.8 163 57.7
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 7.6e-44 181.4 128 70.3
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 1.3e-43 180.6 180 56.1
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.7e-43 180.3 159 59.7
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 1.7e-43 180.3 128 70.3
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 3.8e-43 179.1 180 54.4
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 8.4e-43 177.9 177 52.0
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.2e-42 176.0 227 46.7
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 5.4e-42 175.3 195 50.8
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 7.1e-42 174.9 219 44.3
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 9.2e-42 174.5 182 54.4
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 9.2e-42 174.5 151 55.6
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.2e-41 174.1 207 50.7
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 3.5e-41 172.6 193 53.9
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.0e-40 171.0 218 48.6
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 4.3e-39 165.6 142 59.2
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 3.6e-38 162.5 134 56.0
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 6.2e-38 161.8 161 53.4
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 5.8e-36 155.2 124 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 9.3e-34 147.9 132 52.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.2e-33 147.5 86 75.6
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.6e-33 145.6 172 48.3
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 5.1e-32 142.1 115 53.9
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 1.5e-31 140.6 187 46.0
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.9e-31 140.2 217 46.1
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 2.4e-29 133.3 103 60.2
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 1.4e-26 124.0 154 42.2
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 2.4e-26 123.2 86 66.3
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.4e-26 122.1 82 68.3
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 1.8e-24 117.1 137 48.9
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.6e-20 103.2 216 36.1
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 6.0e-17 92.0 215 35.8
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 3.8e-11 72.8 76 53.9
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 6.5e-11 72.0 67 56.7


User provided reference genes

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