Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold313G48342 Striga asiatica HOM05D004701 ORTHO05D005220 3.7e-60 235.0 145 100.0
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 3.3e-32 142.1 127 59.1
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 1.1e-24 117.1 128 63.3
Oeu052446.1 Olea europaea HOM05D004701 ORTHO05D005220 3.3e-24 115.5 131 51.9
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 1.1e-19 100.5 144 48.6
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 4.2e-19 98.6 126 47.6
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 4.2e-19 98.6 135 51.9
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 5.5e-19 98.2 129 48.1
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 7.1e-19 97.8 132 45.5
Lj5A108T60 Lonicera japonica HOM05D004701 ORTHO05D005220 7.1e-19 97.8 129 46.5
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 9.3e-19 97.4 129 48.1
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.2e-18 97.1 129 48.1
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla HOM05D004701 ORTHO05D005220 1.6e-18 96.7 125 46.4
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 4.6e-18 95.1 126 50.8
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 1.3e-17 93.6 125 44.8
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.3e-17 93.6 128 44.5
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.3e-17 93.6 128 44.5
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.8e-17 93.2 129 45.0
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 3.0e-17 92.4 125 44.8
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 3.0e-17 92.4 125 44.0
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 3.9e-17 92.0 143 42.0
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 8.7e-17 90.9 143 39.9
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 1.1e-16 90.5 129 43.4
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 1.5e-16 90.1 131 45.8
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 1.5e-16 90.1 144 41.0
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 1.5e-16 90.1 132 42.4
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.9e-16 89.7 130 47.7
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 1.9e-16 89.7 126 44.4
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 2.5e-16 89.4 126 42.9
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 2.5e-16 89.4 137 40.1
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 3.3e-16 89.0 128 45.3
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 4.3e-16 88.6 134 42.5
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 4.3e-16 88.6 137 42.3
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 4.3e-16 88.6 129 45.0
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 5.7e-16 88.2 128 45.3
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 1.3e-15 87.0 144 39.6
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.3e-15 87.0 128 41.4
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.3e-15 87.0 144 47.2
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 1.6e-15 86.7 144 39.6
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.6e-15 86.7 144 43.1
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 2.2e-15 86.3 119 44.5
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 2.8e-15 85.9 128 46.1
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.8e-15 85.9 128 45.3
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 2.8e-15 85.9 130 39.2
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 1.4e-14 83.6 141 51.1
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 1.8e-14 83.2 129 41.9
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.8e-14 83.2 130 41.5
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 2.4e-14 82.8 129 41.9
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 3.1e-14 82.4 127 47.2
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 3.1e-14 82.4 129 47.3
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 4.1e-14 82.0 132 47.7
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 4.1e-14 82.0 130 40.0
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 4.1e-14 82.0 131 38.9
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 4.1e-14 82.0 132 41.7
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.1e-14 82.0 127 39.4
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 5.3e-14 81.6 142 40.8
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 6.9e-14 81.3 139 40.3
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.2e-13 80.5 127 40.2
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 1.2e-13 80.5 133 40.6
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 2.0e-13 79.7 126 41.3
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 7.7e-13 77.8 130 45.4
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 1.0e-12 77.4 133 42.1
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.3e-12 77.0 129 41.1
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 2.2e-12 76.3 79 49.4
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 2.2e-12 76.3 133 37.6
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 2.9e-12 75.9 135 35.6
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 3.8e-12 75.5 139 43.9
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 5.0e-12 75.1 129 41.1
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 6.5e-12 74.7 127 37.0
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 1.4e-11 73.6 140 43.6
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.4e-11 73.6 79 49.4
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.9e-11 73.2 82 50.0
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 3.2e-11 72.4 129 51.9
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 5.5e-11 71.6 133 37.6
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 5.5e-11 71.6 138 44.9
CSS0009827 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 7.2e-11 71.2 77 49.4
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 7.2e-11 71.2 128 39.8
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 9.4e-11 70.9 146 45.9
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 2.7e-10 69.3 138 44.9
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 2.7e-10 69.3 133 51.1
CSS0048671 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.6e-10 68.9 77 49.4
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 4.6e-10 68.6 145 47.6
arahy.Tifrunner.gnm1.ann1.4DD1B6 Arachis hypogaea HOM05D004701 ORTHO05D005220 7.9e-10 67.8 136 49.3
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.0e-09 67.4 83 47.0
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 1.0e-09 67.4 132 50.0
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 1.0e-09 67.4 132 50.0
CSS0002973 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.4e-09 67.0 77 48.1
CSS0034852 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.4e-09 67.0 81 48.1
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 1.4e-09 67.0 132 50.8
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.4e-09 67.0 137 46.0
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 3.0e-09 65.9 136 47.8
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 3.9e-09 65.5 138 47.8
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 5.1e-09 65.1 144 38.9
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.5e-08 63.5 125 35.2
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 2.5e-08 62.8 141 47.5
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 2.5e-08 62.8 142 47.9
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 4.3e-08 62.0 139 44.6
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 4.3e-08 62.0 135 33.3
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 1.3e-07 60.5 143 46.2
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 1.3e-07 60.5 139 41.7
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 2.2e-07 59.7 130 49.2
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 2.2e-07 59.7 83 48.2
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 4.8e-07 58.5 130 46.9


User provided reference genes

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