Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold313G48329 Striga asiatica HOM05D012087 ORTHO05D005932 1.6e-119 433.0 251 100.0
Migut.D01759 Erythranthe guttata HOM05D012087 ORTHO05D005932 3.2e-35 152.9 242 42.1
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 6.8e-33 145.2 227 44.5
SalBow5G3698 Salvia bowleyana HOM05D012087 ORTHO05D005932 1.0e-25 121.3 227 44.9
Oeu052457.1 Olea europaea HOM05D012087 ORTHO05D005932 1.5e-24 117.5 206 49.5
Oeu047275.1 Olea europaea HOM05D012087 ORTHO05D005932 9.5e-19 98.2 234 38.9
Solyc03g115730.3 Solanum lycopersicum HOM05D012087 ORTHO05D005932 2.1e-10 70.5 239 28.5
Sopen03g034710 Solanum pennellii HOM05D012087 ORTHO05D005932 2.1e-10 70.5 241 29.5
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 3.6e-10 69.7 250 30.0
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 3.6e-10 69.7 227 30.4
PGSC0003DMG400024562 Solanum tuberosum HOM05D012087 ORTHO05D005932 6.2e-10 68.9 224 29.9
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 1.4e-09 67.8 203 37.9
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 1.4e-09 67.8 219 31.1
HanXRQChr05g0155031 Helianthus annuus HOM05D008369 ORTHO05D011941 1.2e-08 64.7 208 26.4
Lsat_1_v5_gn_1_14361 Lactuca sativa HOM05D008369 ORTHO05D005932 2.6e-08 63.5 186 29.0
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 3.4e-08 63.2 186 30.1
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 4.4e-08 62.8 254 28.7
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 4.4e-08 62.8 237 31.6
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 5.8e-08 62.4 211 30.8
Nitab4.5_0005900g0030 Nicotiana tabacum HOM05D012087 ORTHO05D005932 3.7e-07 59.7 183 33.9
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 4.9e-07 59.3 220 30.9
Peaxi162Scf00274g00335 Petunia axillaris HOM05D012087 ORTHO05D005932 1.1e-06 58.2 187 31.0
CAN.G479.59 Capsicum annuum HOM05D012087 ORTHO05D005932 5.4e-06 55.8 211 27.5
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 7.0e-06 55.5 179 32.4


User provided reference genes

Program Settings