Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold313G48304 Striga asiatica HOM05D006054 ORTHO05D007951 2.2e-61 238.8 125 100.0
Nitab4.5_0004028g0050 Nicotiana tabacum HOM05D000239 ORTHO05D000484 3.2e-23 112.1 130 54.6
Aqoxy3G04019 Aquilegia oxysepala HOM05D006054 ORTHO05D007951 7.0e-23 110.9 127 55.1
Migut.I00447 Erythranthe guttata HOM05D006054 ORTHO05D007951 7.0e-23 110.9 138 52.2
MSTRG.4570 Avicennia marina HOM05D006054 ORTHO05D007951 2.0e-22 109.4 130 57.7
Manes.14G170200 Manihot esculenta HOM05D006054 ORTHO05D007951 3.5e-22 108.6 131 54.2
FAN04G0820 Fragaria x ananassa HOM05D006054 ORTHO05D007951 6.0e-22 107.8 132 53.0
DCAR_014010 Daucus carota HOM05D006054 ORTHO05D007951 7.8e-22 107.5 128 54.7
Nitab4.5_0008639g0010 Nicotiana tabacum HOM05D006054 ORTHO05D007951 7.8e-22 107.5 135 57.0
Lj5A155T99 Lonicera japonica HOM05D006054 ORTHO05D007951 8.6e-21 104.0 127 52.8
Potri.012G048300 Populus trichocarpa HOM05D006054 ORTHO05D007951 8.6e-21 104.0 138 48.6
Eucgr.K02266 Eucalyptus grandis HOM05D006054 ORTHO05D007951 1.1e-20 103.6 125 52.8
PSO478G4576 Papaver somniferum HOM05D006054 ORTHO05D007951 1.1e-20 103.6 134 52.2
Dinv18255 Davidia involucrata HOM05D006054 ORTHO05D007951 1.9e-20 102.8 126 55.6
CAN.G1129.15 Capsicum annuum HOM05D006054 ORTHO05D007951 2.5e-20 102.4 128 53.9
Lj5A156T88 Lonicera japonica HOM05D006054 ORTHO05D007951 4.3e-20 101.7 127 52.0
GSVIVG01008414001 Vitis vinifera HOM05D006054 ORTHO05D007951 4.3e-20 101.7 131 53.4
AUR62043302 Chenopodium quinoa HOM05D006054 ORTHO05D007951 7.3e-20 100.9 126 50.8
PGSC0003DMG400005734 Solanum tuberosum HOM05D006054 ORTHO05D007951 9.5e-20 100.5 128 51.6
Sopen03g038040 Solanum pennellii HOM05D006054 ORTHO05D007951 1.2e-19 100.1 127 54.3
PSO017G1288 Papaver somniferum HOM05D006054 ORTHO05D007951 1.6e-19 99.8 133 51.1
Peaxi162Scf00683g00146 Petunia axillaris HOM05D006054 ORTHO05D007951 1.6e-19 99.8 132 50.8
Thecc.03G053300 Theobroma cacao HOM05D006054 ORTHO05D007951 1.6e-19 99.8 136 47.8
CiPaw.15G140700 Carya illinoinensis HOM05D006054 ORTHO05D007951 2.8e-19 99.0 130 47.7
MBI12_g30399_MAGBIO Magnolia biondii HOM05D006054 ORTHO05D007951 2.8e-19 99.0 124 53.2
RcHm_v2.0_Chr7g0178601 Rosa chinensis HOM05D006054 ORTHO05D007951 2.8e-19 99.0 124 50.8
Nitab4.5_0001986g0060 Nicotiana tabacum HOM05D000239 ORTHO05D000484 3.6e-19 98.6 133 50.4
QL10p028192 Quercus lobata HOM05D006054 ORTHO05D007951 3.6e-19 98.6 129 48.8
Glyma.05G245200 Glycine max HOM05D006054 ORTHO05D007951 4.7e-19 98.2 128 50.0
Medtr8g107010 Medicago truncatula HOM05D006054 ORTHO05D007951 6.2e-19 97.8 126 50.8
ECA233G1701 Erigeron canadensis HOM05D006054 ORTHO05D007951 8.0e-19 97.4 125 48.8
Sabra12G0033800 Salix brachista HOM05D006054 ORTHO05D007951 8.0e-19 97.4 125 50.4
Sed0027930 Sechium edule HOM05D006054 ORTHO05D007951 8.0e-19 97.4 124 52.4
Cc04_g06390 Coffea canephora HOM05D006054 ORTHO05D007951 1.1e-18 97.1 125 50.4
CsaV3_1G007080 Cucumis sativus L. HOM05D006054 ORTHO05D007951 1.1e-18 97.1 128 50.0
A09p60070 Brassica napus HOM05D006054 ORTHO05D007951 1.4e-18 96.7 122 49.2
Cpa.g.sc3.410 Carica papaya HOM05D006054 ORTHO05D007951 1.4e-18 96.7 139 44.6
Lj4g0021104 Lotus japonicus HOM05D006054 ORTHO05D007951 1.4e-18 96.7 124 50.0
TWI60G0269 Tripterygium wilfordii HOM05D006054 ORTHO05D007951 1.4e-18 96.7 133 47.4
BraA09t41376Z Brassica rapa HOM05D006054 ORTHO05D007951 1.8e-18 96.3 121 47.9
Phvul.002G328804 Phaseolus vulgaris HOM05D006054 ORTHO05D007951 1.8e-18 96.3 131 48.9
MD14G1235200 Malus domestica HOM05D006054 ORTHO05D007951 2.3e-18 95.9 127 50.4
CSS0009173 Camellia sinensis var. sinensis HOM05D006054 ORTHO05D007951 3.1e-18 95.5 132 47.7
Lalb_Chr16g0387101 Lupinus albus HOM05D006054 ORTHO05D007951 4.0e-18 95.1 127 51.2
MD06G1230600 Malus domestica HOM05D006054 ORTHO05D007951 6.8e-18 94.4 131 48.9
Aa31LG7G2900 Aethionema arabicum HOM05D006054 ORTHO05D007951 8.9e-18 94.0 55 81.8
ClCG04G010700 Citrullus lanatus HOM05D006054 ORTHO05D007951 8.9e-18 94.0 130 47.7
Oeu026288.1 Olea europaea HOM05D006054 ORTHO05D007951 8.9e-18 94.0 130 53.1
QL10p028307 Quercus lobata HOM05D006054 ORTHO05D007951 8.9e-18 94.0 63 73.0
VMungo0251G3760 Vigna mungo HOM05D006054 ORTHO05D007951 8.9e-18 94.0 124 50.0
Solyc03g119150.4 Solanum lycopersicum HOM05D006054 ORTHO05D007951 1.2e-17 93.6 130 50.0
AUR62041524 Chenopodium quinoa HOM05D006054 ORTHO05D007951 1.5e-17 93.2 54 79.6
Lsat_1_v5_gn_8_144020 Lactuca sativa HOM05D006054 ORTHO05D007951 1.5e-17 93.2 52 84.6
CSS0029176 Camellia sinensis var. sinensis HOM05D006054 ORTHO05D007951 2.0e-17 92.8 129 48.8
FAN18G0499 Fragaria x ananassa HOM05D006054 ORTHO05D007951 2.0e-17 92.8 129 50.4
Psat7g002000 Pisum sativum HOM05D006054 ORTHO05D007951 2.0e-17 92.8 126 50.0
MELO3C002126.2 Cucumis melo HOM05D006054 ORTHO05D007951 3.4e-17 92.0 124 48.4
FAN08G1083 Fragaria x ananassa HOM05D006054 ORTHO05D007951 3.4e-17 92.0 127 49.6
Nn4g24192 Nelumbo nucifera HOM05D006054 ORTHO05D007951 3.4e-17 92.0 124 49.2
arahy.Tifrunner.gnm1.ann1.FT2DSH Arachis hypogaea HOM05D006054 ORTHO05D007951 4.4e-17 91.7 75 62.7
arahy.Tifrunner.gnm1.ann1.LZ1976 Arachis hypogaea HOM05D006054 ORTHO05D007951 4.4e-17 91.7 75 62.7
BcaC07g41342 Brassica carinata HOM05D006054 ORTHO05D007951 4.4e-17 91.7 65 69.2
C08p43510 Brassica napus HOM05D006054 ORTHO05D007951 4.4e-17 91.7 121 46.3
Hma1.2p1_0669F.1_g200190 Hydrangea macrophylla HOM05D006054 ORTHO05D007951 4.4e-17 91.7 138 48.6
Ca_17203_v3 Cicer arietinum L. HOM05D006054 ORTHO05D007951 5.8e-17 91.3 128 46.9
PGR044G0876 Punica granatum HOM05D006054 ORTHO05D007951 5.8e-17 91.3 133 46.6
Hund02327 Selenicereus undatus HOM05D006054 ORTHO05D007951 7.5e-17 90.9 126 49.2
BolC8t51897H Brassica oleracea HOM05D006054 ORTHO05D007951 1.3e-16 90.1 65 67.7
Gohir.A08G174100 Gossypium hirsutum HOM05D006054 ORTHO05D007951 1.3e-16 90.1 55 76.4
Gohir.D08G192800 Gossypium hirsutum HOM05D006054 ORTHO05D007951 1.3e-16 90.1 55 76.4
Gorai.004G202900 Gossypium raimondii HOM05D006054 ORTHO05D007951 1.3e-16 90.1 55 76.4
Rhsim12G0139100 Rhododendron simsii HOM05D006054 ORTHO05D007951 1.3e-16 90.1 50 86.0
Glyma.08G052800 Glycine max HOM05D006054 ORTHO05D007951 1.7e-16 89.7 124 47.6
Prupe.5G231900 Prunus persica HOM05D006054 ORTHO05D007951 1.7e-16 89.7 143 45.5
Carub.0001s1781 Capsella rubella HOM05D006054 ORTHO05D007951 2.2e-16 89.4 55 74.5
Thhalv10008547m.g Eutrema salsugineum HOM05D006054 ORTHO05D007951 2.2e-16 89.4 55 72.7
Actinidia35123 Actinidia chinensis HOM05D006054 ORTHO05D007951 2.9e-16 89.0 128 49.2
THA.LOC104812166 Tarenaya hassleriana HOM05D006054 ORTHO05D007951 3.7e-16 88.6 73 60.3
HanXRQChr08g0227401 Helianthus annuus HOM05D006054 ORTHO05D007951 4.9e-16 88.2 72 66.7
Ciclev10009243m.g Citrus clementina HOM05D006054 ORTHO05D007951 6.4e-16 87.8 129 48.1
CDE06G1309 Ceratophyllum demersum HOM05D006054 ORTHO05D007951 1.4e-15 86.7 124 46.8
THA.LOC104813923 Tarenaya hassleriana HOM05D006054 ORTHO05D007951 2.4e-15 85.9 127 44.9
AL1G30540 Arabidopsis lyrata HOM05D006054 ORTHO05D007951 4.1e-15 85.1 51 76.5
Cfa019678 Carpinus fangiana HOM05D006054 ORTHO05D007951 4.1e-15 85.1 124 46.0
TPR.G1413 Trifolium pratense HOM05D006054 ORTHO05D007951 4.1e-15 85.1 126 45.2
AUR62042074 Chenopodium quinoa HOM05D006054 ORTHO05D007951 5.4e-15 84.7 123 43.1
vmacro16417 Vaccinium macrocarpon HOM05D006054 ORTHO05D007951 1.2e-14 83.6 128 42.2
AT1G18170 Arabidopsis thaliana HOM05D006054 ORTHO05D007951 1.6e-14 83.2 49 77.6
Duzib084G0786 Durio zibethinus HOM05D006054 ORTHO05D007951 4.6e-14 81.6 125 44.0
Pp3c16_12630 Physcomitrium patens HOM05D006054 ORTHO05D007951 4.6e-14 81.6 50 76.0
ATR1102G034 Amborella trichopoda HOM05D006054 ORTHO05D007951 7.8e-14 80.9 48 75.0
COL.COLO4_16137 Corchorus olitorius HOM05D006054 ORTHO05D007951 7.8e-14 80.9 124 43.5
Mapoly0139s0002 Marchantia polymorpha HOM05D006054 ORTHO05D007951 7.8e-14 80.9 59 66.1
Os03g0708500 Oryza sativa ssp. japonica HOM05D006054 ORTHO05D007951 1.3e-13 80.1 132 40.2
Zm00001eb235380 Zea mays HOM05D006054 ORTHO05D007951 1.7e-13 79.7 93 47.3
CDE07G1103 Ceratophyllum demersum HOM05D006054 ORTHO05D007597 2.3e-13 79.3 51 76.5
Ah.11g043570 Amaranthus hybridus HOM05D006054 ORTHO05D007951 3.9e-13 78.6 120 45.8
Zm00001eb216540 Zea mays HOM05D006054 ORTHO05D007951 3.9e-13 78.6 125 43.2
TAR371G0894 Trochodendron aralioides HOM05D006054 ORTHO05D007951 8.6e-13 77.4 128 44.5
AagrBONN_evm.TU.Sc2ySwM_228.1432 Anthoceros agrestis HOM05D006054 ORTHO05D007951 1.9e-12 76.3 127 43.3
SMO200G0018 Selaginella moellendorffii HOM05D006054 ORTHO05D007951 5.6e-12 74.7 48 75.0
Sp5g28830 Schrenkiella parvula HOM05D006054 ORTHO05D007951 1.1e-10 70.5 47 66.0
TAR629G2659 Trochodendron aralioides HOM05D006054 ORTHO05D007951 1.2e-09 67.0 109 45.0
AT1G73655 Arabidopsis thaliana HOM05D006054 ORTHO05D007951 2.6e-09 65.9 48 66.7
A07p29740 Brassica napus HOM05D006054 ORTHO05D007951 3.4e-09 65.5 47 59.6
BraA07t30613Z Brassica rapa HOM05D006054 ORTHO05D007951 3.4e-09 65.5 47 59.6
Cre02.g095097 Chlamydomonas reinhardtii HOM05D006054 ORTHO05D007951 3.4e-09 65.5 100 41.0
Carub.0002s2040 Capsella rubella HOM05D006054 ORTHO05D007951 7.5e-09 64.3 48 66.7
BcaB03g15721 Brassica carinata HOM05D006054 ORTHO05D007951 9.9e-09 63.9 47 57.4
BcaC08g45629 Brassica carinata HOM05D006054 ORTHO05D007951 2.2e-08 62.8 111 40.5
MCO04G385 Micromonas commoda HOM05D006054 ORTHO05D007951 2.2e-08 62.8 50 60.0
Thhalv10019056m.g Eutrema salsugineum HOM05D006054 ORTHO05D007951 3.7e-08 62.0 109 39.4
PRCOL_00004995 Prasinoderma coloniale HOM05D006054 ORTHO05D007951 1.4e-07 60.1 55 52.7
AL2G33440 Arabidopsis lyrata HOM05D006054 ORTHO05D007951 5.4e-07 58.2 48 62.5
C06p33920 Brassica napus HOM05D006054 ORTHO05D007951 7.8e-06 54.3 111 38.7
BolC6t38505H Brassica oleracea HOM05D006054 ORTHO05D007951 7.8e-06 54.3 111 38.7


User provided reference genes

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