Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold311G48250 Striga asiatica HOM05D008494 ORTHO05D010021 9.1e-56 219.9 106 100.0
Oeu033225.1 Olea europaea HOM05D008494 ORTHO05D010021 5.4e-24 114.4 96 52.1
Oeu000174.1 Olea europaea HOM05D008494 ORTHO05D010021 8.6e-22 107.1 95 54.7
Migut.B00913 Erythranthe guttata HOM05D008494 ORTHO05D010021 1.1e-19 100.1 93 58.1
Peaxi162Scf00194g00512 Petunia axillaris HOM05D008494 ORTHO05D010021 1.8e-19 99.4 95 51.6
Solyc01g102430.2 Solanum lycopersicum HOM05D008494 ORTHO05D010021 3.4e-18 95.1 99 47.5
Manes.08G105911 Manihot esculenta HOM05D008494 ORTHO05D010021 7.5e-18 94.0 98 49.0
DCAR_029308 Daucus carota HOM05D008494 ORTHO05D010021 1.3e-17 93.2 105 45.7
Rhsim11G0107000 Rhododendron simsii HOM05D000136 ORTHO05D000080 1.3e-17 93.2 95 46.3
RcHm_v2.0_Chr3g0459041 Rosa chinensis HOM05D008494 ORTHO05D010021 3.7e-17 91.7 96 47.9
Prupe.6G302200 Prunus persica HOM05D008494 ORTHO05D010021 4.9e-17 91.3 92 51.1
MD04G1183700 Malus domestica HOM05D008494 ORTHO05D010021 2.4e-16 89.0 78 53.8
FAN14G1748 Fragaria x ananassa HOM05D008494 ORTHO05D010021 7.1e-16 87.4 97 46.4
QL03p011411 Quercus lobata HOM05D008494 ORTHO05D010021 1.6e-15 86.3 90 48.9
Peaxi162Scf00071g00117 Petunia axillaris HOM05D008494 ORTHO05D010021 2.1e-15 85.9 91 47.3
DCAR_003254 Daucus carota HOM05D008494 ORTHO05D010021 7.8e-15 84.0 98 46.9
Atru.chr12.1506 Acer truncatum HOM05D008494 ORTHO05D010021 1.1e-13 80.1 100 41.0
Haze_15004 Corylus avellana HOM05D008494 ORTHO05D010021 1.1e-13 80.1 93 48.4
Ciclev10030055m.g Citrus clementina HOM05D008494 ORTHO05D010021 4.3e-13 78.2 105 41.0
Lalb_Chr02g0147351 Lupinus albus HOM05D008494 ORTHO05D010021 4.3e-13 78.2 89 46.1
Manes.09G182700 Manihot esculenta HOM05D008494 ORTHO05D010021 5.6e-13 77.8 97 41.2
Hma1.2p1_0157F.1_g069490 Hydrangea macrophylla HOM05D008494 ORTHO05D010021 9.5e-13 77.0 68 54.4
ECA234G2754 Erigeron canadensis HOM05D008494 ORTHO05D010021 1.2e-12 76.6 87 43.7
Potri.005G000800 Populus trichocarpa HOM05D008494 ORTHO05D010021 1.2e-12 76.6 105 41.9
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 3.6e-12 75.1 94 44.7
Phvul.001G220800 Phaseolus vulgaris HOM05D008494 ORTHO05D010021 3.6e-12 75.1 89 46.1
VMungo1383G1264 Vigna mungo HOM05D008494 ORTHO05D010021 6.2e-12 74.3 89 44.9
Atru.chr12.1501 Acer truncatum HOM05D008494 ORTHO05D010021 8.1e-12 73.9 100 38.0
CiPaw.02G000600 Carya illinoinensis HOM05D008494 ORTHO05D010021 1.1e-11 73.6 94 42.6
Actinidia17727 Actinidia chinensis HOM05D008494 ORTHO05D010021 4.0e-11 71.6 60 51.7
Lj1g0018830 Lotus japonicus HOM05D008494 ORTHO05D010021 1.5e-10 69.7 98 42.9
Potri.013G000100 Populus trichocarpa HOM05D008494 ORTHO05D010021 5.8e-10 67.8 103 40.8
Oeu025675.1 Olea europaea HOM05D008494 ORTHO05D010021 9.9e-10 67.0 88 42.0
Glyma.03G227000 Glycine max HOM05D008494 ORTHO05D010021 1.7e-09 66.2 90 45.6
Medtr7g111200 Medicago truncatula HOM05D008494 ORTHO05D010021 2.9e-09 65.5 99 40.4
Lalb_Chr21g0309951 Lupinus albus HOM05D008494 ORTHO05D010021 8.4e-09 63.9 66 45.5
Glyma.19G223900 Glycine max HOM05D008494 ORTHO05D010021 1.1e-08 63.5 95 42.1
Thecc.05G331500 Theobroma cacao HOM05D008494 ORTHO05D010021 1.4e-08 63.2 91 41.8
Sed0011896 Sechium edule HOM05D008494 ORTHO05D010021 5.4e-08 61.2 96 38.5
TPR.G1638 Trifolium pratense HOM05D008494 ORTHO05D010021 1.6e-07 59.7 93 40.9
Nitab4.5_0004090g0020 Nicotiana tabacum HOM05D008494 ORTHO05D010021 2.1e-07 59.3 80 43.8
Lalb_Chr04g0260271 Lupinus albus HOM05D008494 ORTHO05D010021 1.0e-06 57.0 98 35.7
arahy.Tifrunner.gnm1.ann1.J2KNI4 Arachis hypogaea HOM05D008494 ORTHO05D010021 5.1e-06 54.7 73 38.4


User provided reference genes

Program Settings