Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold311G48246 Striga asiatica HOM05D002090 ORTHO05D001923 5.5e-71 270.8 130 100.0
SGA_v2.0_scaffold3G01649 Striga asiatica HOM05D002090 ORTHO05D001923 1.0e-45 186.8 89 97.8
SGA_v2.0_scaffold142G35618 Striga asiatica HOM05D002090 ORTHO05D001923 2.4e-42 175.6 89 91.0
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 2.4e-42 175.6 89 91.0
SGA_v2.0_scaffold29G12295 Striga asiatica HOM05D002090 ORTHO05D001923 1.2e-41 173.3 89 89.9
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 6.0e-25 117.9 122 48.4
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 5.2e-21 104.8 90 57.8
SGA_v2.0_scaffold58G20511 Striga asiatica HOM05D002090 ORTHO05D001923 8.4e-11 70.9 58 53.4
Glyma.14G139850 Glycine max HOM05D002090 ORTHO05D001923 2.1e-09 66.2 78 37.2
EL10Ac1g00284 Beta vulgaris HOM05D000353 ORTHO05D000174 6.0e-09 64.7 81 39.5
Lalb_Chr09g0332511 Lupinus albus HOM05D002090 ORTHO05D001923 1.3e-08 63.5 100 32.0
Lalb_Chr21g0319461 Lupinus albus HOM05D002090 ORTHO05D001923 1.7e-08 63.2 81 35.8
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 5.1e-08 61.6 78 34.6
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.7e-08 60.8 85 34.1
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 4.3e-07 58.5 122 30.3
SGA_v2.0_scaffold353G49709 Striga asiatica HOM05D000353 ORTHO05D001923 7.3e-07 57.8 76 43.4
arahy.Tifrunner.gnm1.ann1.7R55CH Arachis hypogaea HOM05D008664 ORTHO05D000174 4.8e-06 55.1 129 27.9
arahy.Tifrunner.gnm1.ann1.64IA1E Arachis hypogaea HOM05D008664 ORTHO05D000174 8.1e-06 54.3 78 34.6


User provided reference genes

Program Settings