Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold310G48220 Striga asiatica HOM05D014772 ORTHO05D019381 1.7e-118 429.5 233 100.0
SGA_v2.0_scaffold158G37437 Striga asiatica HOM05D014772 ORTHO05D019381 1.4e-32 144.1 135 63.7
SGA_v2.0_scaffold2707G54187 Striga asiatica HOM05D014772 ORTHO05D019381 4.1e-32 142.5 135 63.7
SGA_v2.0_scaffold155G37248 Striga asiatica HOM05D014772 ORTHO05D019381 6.9e-32 141.7 135 63.0
SGA_v2.0_scaffold142G35662 Striga asiatica HOM05D014772 ORTHO05D019381 5.9e-31 138.7 135 63.0
SGA_v2.0_scaffold6G03457 Striga asiatica HOM05D014772 ORTHO05D019381 2.9e-30 136.3 135 60.7
SGA_v2.0_scaffold186G40124 Striga asiatica HOM05D014772 ORTHO05D019381 2.6e-26 123.2 134 56.7
Oeu032569.1 Olea europaea HOM05D002917 ORTHO05D002431 3.1e-08 63.2 55 58.2
Nitab4.5_0006764g0020 Nicotiana tabacum HOM05D012161 ORTHO05D002431 2.0e-07 60.5 60 56.7
Nitab4.5_0009266g0010 Nicotiana tabacum HOM05D012161 ORTHO05D002431 2.0e-07 60.5 57 61.4
Potri.001G273300 Populus trichocarpa HOM05D002917 ORTHO05D002431 2.0e-07 60.5 70 55.7
Potri.009G067600 Populus trichocarpa HOM05D002917 ORTHO05D002431 2.0e-07 60.5 51 64.7
CSS0010926 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 2.7e-07 60.1 53 58.5
CAN.G468.5 Capsicum annuum HOM05D012161 ORTHO05D002431 3.5e-07 59.7 57 59.6
SGA_v2.0_scaffold149G36533 Striga asiatica HOM05D014772 ORTHO05D019381 3.5e-07 59.7 67 46.3
Sopen11g024730 Solanum pennellii HOM05D012161 ORTHO05D002431 5.9e-07 58.9 57 57.9
CSS0017424 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 7.7e-07 58.5 53 56.6
CSS0039673 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 7.7e-07 58.5 53 56.6
Sabra09G0050600 Salix brachista HOM05D002917 ORTHO05D002431 7.7e-07 58.5 51 62.7
COL.COLO4_24485 Corchorus olitorius HOM05D009394 ORTHO05D002431 1.0e-06 58.2 48 64.6
MD03G1164700 Malus domestica HOM05D012161 ORTHO05D002431 1.7e-06 57.4 52 59.6
Prupe.4G264200 Prunus persica HOM05D002917 ORTHO05D002431 1.7e-06 57.4 53 58.5
Haze_23253 Corylus avellana HOM05D002917 ORTHO05D002431 2.2e-06 57.0 50 62.0
Dinv15024 Davidia involucrata HOM05D002917 ORTHO05D002431 2.2e-06 57.0 53 56.6
Migut.N02378 Erythranthe guttata HOM05D009394 ORTHO05D002431 2.2e-06 57.0 65 50.8
MBI19_g20793_MAGBIO Magnolia biondii HOM05D002917 ORTHO05D002431 2.9e-06 56.6 49 61.2
PGR119G1093 Punica granatum HOM05D002917 ORTHO05D002431 2.9e-06 56.6 50 60.0
AL6G30970 Arabidopsis lyrata HOM05D002917 ORTHO05D002431 3.8e-06 56.2 65 52.3
Rhsim13G0207800 Rhododendron simsii HOM05D002917 ORTHO05D002431 3.8e-06 56.2 49 59.2
GSVIVG01037326001 Vitis vinifera HOM05D002917 ORTHO05D002431 3.8e-06 56.2 55 58.2
THA.LOC104799140 Tarenaya hassleriana HOM05D012161 ORTHO05D002431 5.0e-06 55.8 61 60.7
CAN.G575.96 Capsicum annuum HOM05D023424 ORTHO05D002431 6.5e-06 55.5 60 53.3
Eucgr.J00684 Eucalyptus grandis HOM05D002917 ORTHO05D002431 6.5e-06 55.5 50 56.0
Manes.02G136400 Manihot esculenta HOM05D002917 ORTHO05D002431 6.5e-06 55.5 57 52.6
Peaxi162Scf00272g00824 Petunia axillaris HOM05D023424 ORTHO05D002431 6.5e-06 55.5 61 52.5


User provided reference genes

Program Settings