Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 1.4e-254 882.5 467 100.0
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 3.5e-136 489.2 443 62.3
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 7.9e-136 488.0 449 60.6
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 2.5e-113 413.3 482 52.5
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 4.7e-104 382.5 440 49.5
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 6.1e-104 382.1 433 52.0
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 2.3e-103 380.2 444 48.6
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 3.1e-100 369.8 431 47.6
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 3.1e-100 369.8 431 47.6
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 5.9e-99 365.5 440 49.1
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.0e-98 364.8 422 49.5
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 6.5e-98 362.1 437 46.0
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 8.5e-98 361.7 425 48.7
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.1e-97 361.3 430 47.2
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 1.1e-97 361.3 436 46.8
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 5.5e-97 359.0 425 47.3
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 5.5e-97 359.0 404 49.8
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 1.6e-96 357.5 426 47.2
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 1.6e-96 357.5 425 47.1
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 2.1e-96 357.1 418 46.9
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 2.7e-96 356.7 425 48.0
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 2.7e-96 356.7 426 48.6
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.4e-95 354.4 440 45.2
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.2e-94 351.3 433 47.8
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 2.0e-94 350.5 448 47.8
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 2.0e-94 350.5 422 45.7
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 9.8e-94 348.2 425 48.0
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 2.2e-93 347.1 426 48.1
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 4.9e-93 345.9 452 44.9
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 8.3e-93 345.1 421 44.7
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 3.1e-92 343.2 419 45.3
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 4.1e-92 342.8 381 48.6
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 4.1e-92 342.8 421 46.1
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 7.0e-92 342.0 444 45.3
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 1.2e-91 341.3 448 44.0
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 1.2e-91 341.3 420 45.5
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 2.0e-91 340.5 453 42.2
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 3.5e-91 339.7 418 47.1
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 3.5e-91 339.7 428 47.0
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 3.5e-91 339.7 426 45.8
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 3.5e-91 339.7 419 45.3
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 5.9e-91 339.0 447 43.2
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 1.3e-90 337.8 381 48.6
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 8.6e-90 335.1 422 45.5
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 1.5e-89 334.3 419 45.1
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 4.7e-88 329.3 438 46.1
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 6.1e-88 328.9 420 44.3
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 8.0e-88 328.6 417 42.9
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 1.4e-87 327.8 435 42.8
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 2.3e-87 327.0 430 44.7
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.0e-87 326.6 436 42.2
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 2.0e-86 323.9 432 43.1
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.3e-85 321.2 400 46.5
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 1.7e-85 320.9 439 41.2
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 2.9e-85 320.1 420 43.3
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 1.8e-84 317.4 424 43.4
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 1.8e-84 317.4 432 42.6
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 7.0e-84 315.5 429 42.4
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 1.2e-83 314.7 387 45.0
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.6e-83 314.3 365 46.8
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 4.6e-83 312.8 427 41.5
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 1.3e-82 311.2 441 40.8
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.7e-82 310.8 413 42.1
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 2.9e-82 310.1 425 42.6
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 3.9e-82 309.7 438 40.6
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 5.0e-82 309.3 424 42.9
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.0e-82 309.3 436 41.3
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 8.6e-82 308.5 405 41.2
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 1.1e-81 308.1 413 41.9
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.1e-81 308.1 439 40.5
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.9e-81 307.4 427 41.2
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 3.3e-81 306.6 387 43.2
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.3e-81 306.6 447 40.5
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 4.3e-81 306.2 413 41.9
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 5.6e-81 305.8 413 41.9
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 9.5e-81 305.1 407 41.8
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 3.6e-80 303.1 407 41.8
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 3.6e-80 303.1 446 39.9
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 1.2e-78 298.1 450 40.9
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 2.9e-77 293.5 444 39.6
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.2e-75 288.1 385 43.1
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 8.6e-74 282.0 332 46.4
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 1.5e-73 281.2 420 39.5
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 7.3e-73 278.9 413 40.0
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 1.6e-72 277.7 299 48.5
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.7e-69 267.7 266 53.0
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 1.1e-68 265.0 367 43.9
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 3.3e-65 253.4 285 51.6
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 4.0e-63 246.5 351 39.0
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.2e-59 235.0 426 35.4
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 1.6e-59 234.6 351 41.9
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.6e-56 223.4 309 42.7
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 1.8e-55 221.1 412 34.5
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.8e-55 221.1 362 39.0
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 1.8e-55 221.1 405 36.5
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 3.1e-55 220.3 421 35.9
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 9.9e-54 215.3 390 35.6
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 8.1e-48 195.7 253 44.3
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 3.4e-46 190.3 199 51.3
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 7.9e-43 179.1 205 44.4
SGA_v2.0_scaffold81G26073 Striga asiatica HOM05D006834 ORTHO05D008623 7.6e-38 162.5 131 68.7
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 5.5e-36 156.4 234 44.9
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 1.6e-24 118.2 199 39.7
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 3.7e-24 117.1 94 58.5
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 5.1e-18 96.7 227 32.2
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.9e-15 86.3 124 41.9
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.4e-12 78.6 62 53.2
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.2e-12 77.0 56 57.1
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.6e-11 73.6 62 51.6


User provided reference genes

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