Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 0.0e+00 1528.5 817 100.0
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 5.8e-251 871.3 863 60.1
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 1.1e-177 627.9 790 51.0
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 5.3e-79 300.1 715 36.2
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 1.0e-69 269.2 665 36.1
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 4.7e-67 260.4 803 32.6
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 2.9e-61 241.1 828 31.8
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 6.1e-59 233.4 818 31.4
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 8.3e-56 223.0 801 30.1
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 7.0e-55 219.9 819 30.3
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 5.9e-54 216.9 814 29.9
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 8.6e-53 213.0 870 29.1
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 8.6e-53 213.0 818 29.7
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 4.0e-50 204.1 830 29.2
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 1.5e-49 202.2 821 29.4
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 3.4e-49 201.1 851 28.7
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 7.5e-49 199.9 872 29.0
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 9.8e-49 199.5 833 28.6
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.4e-47 195.7 827 29.1
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 5.4e-47 193.7 827 28.4
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 1.6e-46 192.2 816 28.2
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 5.6e-44 183.7 880 28.0
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 7.3e-44 183.3 831 26.6
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 7.3e-44 183.3 827 27.6
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 1.2e-43 182.6 837 28.3
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 1.2e-43 182.6 824 28.5
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 6.2e-43 180.3 814 29.1
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 6.2e-43 180.3 822 29.6
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 3.1e-42 177.9 880 27.8
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 3.1e-42 177.9 841 27.9
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 3.4e-41 174.5 832 25.1
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.8e-41 172.9 856 28.2
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 2.9e-40 171.4 834 27.6
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 8.3e-40 169.9 804 27.6
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 1.4e-39 169.1 802 28.9
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 5.4e-39 167.2 811 27.7
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 3.5e-38 164.5 614 29.8
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 4.6e-38 164.1 820 26.1
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 6.0e-38 163.7 838 27.3
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 7.8e-38 163.3 816 27.9
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 1.7e-37 162.2 796 27.1
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 3.0e-37 161.4 810 24.9
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 3.9e-37 161.0 812 26.8
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 6.6e-37 160.2 807 27.4
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 3.3e-36 157.9 779 28.0
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 4.3e-36 157.5 961 25.4
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 4.3e-36 157.5 853 26.6
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 4.3e-36 157.5 809 29.0
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 7.3e-36 156.8 791 27.4
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 3.6e-35 154.5 787 25.2
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 4.7e-35 154.1 818 25.7
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 4.7e-35 154.1 271 42.1
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 6.2e-35 153.7 851 26.6
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 1.1e-34 152.9 834 25.8
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.4e-34 152.5 889 26.8
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.8e-34 152.1 809 28.2
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 3.1e-34 151.4 819 25.6
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 1.2e-33 149.4 803 25.8
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 2.0e-33 148.7 251 39.8
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 3.4e-33 147.9 812 25.5
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.4e-33 147.9 876 26.7
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 3.4e-33 147.9 182 47.8
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 3.4e-33 147.9 819 26.6
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 4.4e-33 147.5 803 26.2
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 5.8e-33 147.1 824 27.3
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 7.6e-33 146.7 831 27.3
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 7.6e-33 146.7 781 26.5
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 9.9e-33 146.4 707 26.6
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 1.7e-32 145.6 804 24.5
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 2.2e-32 145.2 161 49.7
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 2.9e-32 144.8 819 24.9
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.8e-32 144.4 881 26.3
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 8.4e-32 143.3 881 24.7
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 2.4e-31 141.7 811 24.4
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 3.2e-31 141.4 883 25.1
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 3.5e-30 137.9 805 25.5
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 7.8e-30 136.7 869 25.5
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 1.3e-29 136.0 169 45.6
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 1.7e-29 135.6 566 31.8
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 1.7e-29 135.6 880 26.8
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 5.1e-29 134.0 829 24.8
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 6.6e-29 133.7 627 26.8
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.6e-27 129.0 916 25.9
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 2.8e-27 128.3 822 25.3
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 3.6e-27 127.9 797 26.5
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 4.0e-26 124.4 814 25.1
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.2e-25 122.9 770 26.5
SGA_v2.0_scaffold80G25674 Striga asiatica HOM05D005434 ORTHO05D006412 1.7e-24 119.0 116 59.5
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 2.9e-24 118.2 572 26.0
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 3.8e-24 117.9 137 47.4
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 8.4e-24 116.7 773 24.6
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 8.4e-24 116.7 163 44.2
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 2.7e-22 111.7 766 24.3
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 4.6e-22 110.9 809 25.7
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 6.6e-21 107.1 823 25.3
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 8.7e-21 106.7 843 25.0
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 8.7e-21 106.7 188 36.2
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 1.1e-20 106.3 656 24.7
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 7.3e-20 103.6 779 25.7
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.6e-19 102.4 121 47.1
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 1.4e-18 99.4 106 52.8
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 4.0e-18 97.8 839 25.9
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 1.5e-17 95.9 173 36.4
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 5.8e-17 94.0 146 38.4
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 7.6e-17 93.6 303 33.3
unitig_52.g16899 Utricularia gibba HOM05D005434 ORTHO05D006412 1.2e-14 86.3 211 32.2
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 1.0e-13 83.2 493 26.2
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.3e-13 82.8 95 48.4
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 7.4e-12 77.0 427 27.9
unitig_62.g23900 Utricularia gibba HOM05D002367 ORTHO05D006412 1.3e-11 76.3 313 30.4
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 2.1e-11 75.5 615 26.5
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 2.8e-11 75.1 371 29.9
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 2.0e-09 68.9 333 31.2
unitig_52.g16898 Utricularia gibba HOM05D002367 ORTHO05D002566 1.9e-07 62.4 144 37.5
SEGI_30180 Sequoiadendron giganteum HOM05D005434 ORTHO05D006412 4.2e-07 61.2 164 28.0
PGSC0003DMG400023095 Solanum tuberosum HOM05D005434 ORTHO05D007977 3.5e-06 58.2 81 40.7
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 4.6e-06 57.8 347 25.1
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 6.0e-06 57.4 330 27.0


User provided reference genes

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