Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12523 Striga asiatica HOM05D001960 ORTHO05D007725 3.6e-285 984.2 484 100.0
Migut.K01335 Erythranthe guttata HOM05D001960 ORTHO05D007725 7.5e-230 800.4 485 81.2
MSTRG.15488 Avicennia marina HOM05D001960 ORTHO05D007725 7.7e-227 790.4 485 79.0
SalBow1G8169 Salvia bowleyana HOM05D001960 ORTHO05D007725 2.1e-224 782.3 487 78.2
QL02p080348 Quercus lobata HOM05D001960 ORTHO05D007725 1.8e-220 769.2 488 77.3
Oeu060916.1 Olea europaea HOM05D001960 ORTHO05D007725 7.0e-220 767.3 488 77.9
Atru.chr8.1915 Acer truncatum HOM05D001960 ORTHO05D007725 4.0e-215 751.5 485 75.3
Nitab4.5_0000564g0320 Nicotiana tabacum HOM05D001960 ORTHO05D007725 1.3e-213 746.5 487 74.7
PGSC0003DMG400001411 Solanum tuberosum HOM05D001960 ORTHO05D007725 4.9e-213 744.6 487 74.5
Solyc02g087640.3 Solanum lycopersicum HOM05D001960 ORTHO05D007725 6.3e-213 744.2 487 74.3
Nitab4.5_0002265g0270 Nicotiana tabacum HOM05D001960 ORTHO05D007725 8.3e-213 743.8 487 74.7
Sopen02g032390 Solanum pennellii HOM05D001960 ORTHO05D007725 3.1e-212 741.9 487 73.9
Hma1.2p1_1232F.1_g268880 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 1.2e-211 740.0 429 81.6
Actinidia06068 Actinidia chinensis HOM05D001960 ORTHO05D007725 1.6e-211 739.6 488 74.8
Cfa007507 Carpinus fangiana HOM05D001960 ORTHO05D007725 5.9e-211 737.6 499 73.5
CSS0036057 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 7.8e-211 737.3 492 74.8
DCAR_006720 Daucus carota HOM05D001960 ORTHO05D007725 1.3e-210 736.5 530 70.2
CiPaw.03G030400 Carya illinoinensis HOM05D001960 ORTHO05D007725 2.9e-210 735.3 500 71.8
TAR371G1229 Trochodendron aralioides HOM05D001960 ORTHO05D007725 2.9e-210 735.3 487 73.3
Sabra17G0069200 Salix brachista HOM05D001960 ORTHO05D007725 3.8e-210 734.9 491 74.1
Oeu033340.1 Olea europaea HOM05D001960 ORTHO05D007725 1.5e-209 733.0 465 75.3
RhsimUnG0055000 Rhododendron simsii HOM05D001960 ORTHO05D007725 1.5e-209 733.0 491 75.2
Manes.17G020800 Manihot esculenta HOM05D001960 ORTHO05D007725 1.9e-209 732.6 494 75.1
Thecc.04G074100 Theobroma cacao HOM05D001960 ORTHO05D007725 3.3e-209 731.9 488 74.2
CAN.G206.108 Capsicum annuum HOM05D001960 ORTHO05D007725 4.3e-209 731.5 488 73.6
Gohir.D04G050500 Gossypium hirsutum HOM05D001960 ORTHO05D007725 4.3e-209 731.5 488 74.0
Ciclev10011611m.g Citrus clementina HOM05D001960 ORTHO05D007725 9.5e-209 730.3 488 73.8
GSVIVG01032604001 Vitis vinifera HOM05D001960 ORTHO05D007725 9.5e-209 730.3 489 73.6
CANSAT64G2224 Cannabis sativa HOM05D001960 ORTHO05D007725 2.1e-208 729.2 490 73.9
THA.LOC104823928 Tarenaya hassleriana HOM05D001960 ORTHO05D007725 2.1e-208 729.2 484 74.2
Gorai.012G056000 Gossypium raimondii HOM05D001960 ORTHO05D007725 2.8e-208 728.8 488 73.6
MD09G1045900 Malus domestica HOM05D001960 ORTHO05D007725 3.6e-208 728.4 494 74.5
MD17G1046800 Malus domestica HOM05D001960 ORTHO05D007725 1.4e-207 726.5 493 74.4
Cc01_g00810 Coffea canephora HOM05D001960 ORTHO05D007725 6.8e-207 724.2 494 72.7
Prupe.3G272300 Prunus persica HOM05D001960 ORTHO05D007725 1.2e-206 723.4 498 73.1
FAN05G4054 Fragaria x ananassa HOM05D001960 ORTHO05D007725 2.0e-206 722.6 493 72.4
Potri.017G077000 Populus trichocarpa HOM05D001960 ORTHO05D007725 9.8e-206 720.3 492 72.2
arahy.Tifrunner.gnm1.ann1.9ZMQ3R Arachis hypogaea HOM05D001960 ORTHO05D007725 2.2e-205 719.2 465 74.0
TWI34G1416 Tripterygium wilfordii HOM05D001960 ORTHO05D007725 2.2e-205 719.2 489 71.6
Haze_14586 Corylus avellana HOM05D001960 ORTHO05D007725 3.7e-205 718.4 537 67.8
arahy.Tifrunner.gnm1.ann1.57V2RC Arachis hypogaea HOM05D001960 ORTHO05D007725 2.4e-204 715.7 462 74.0
Nn3g17123 Nelumbo nucifera HOM05D001960 ORTHO05D007725 2.4e-204 715.7 452 75.9
RcHm_v2.0_Chr2g0169211 Rosa chinensis HOM05D001960 ORTHO05D007725 3.2e-204 715.3 489 72.4
MELO3C021973.2 Cucumis melo HOM05D001960 ORTHO05D007725 2.7e-203 712.2 500 69.8
Thhalv10004119m.g Eutrema salsugineum HOM05D001960 ORTHO05D007725 3.5e-203 711.8 487 70.0
Medtr4g075200 Medicago truncatula HOM05D001960 ORTHO05D007725 1.7e-202 709.5 429 77.9
Phvul.011G027550 Phaseolus vulgaris HOM05D001960 ORTHO05D007725 3.0e-202 708.8 435 76.8
BcaC06g30901 Brassica carinata HOM05D001960 ORTHO05D007725 3.9e-202 708.4 490 69.0
CARHR286600 Cardamine hirsuta HOM05D001960 ORTHO05D007725 3.9e-202 708.4 487 70.2
Eucgr.J02136 Eucalyptus grandis HOM05D001960 ORTHO05D007725 1.9e-201 706.1 476 71.8
Lj3g0011182 Lotus japonicus HOM05D001960 ORTHO05D007725 2.5e-201 705.7 430 77.4
BcaC06g33634 Brassica carinata HOM05D001960 ORTHO05D007725 1.2e-200 703.4 486 69.5
Glyma.11G099200 Glycine max HOM05D001960 ORTHO05D007725 1.2e-200 703.4 487 71.9
C07p37650 Brassica napus HOM05D001960 ORTHO05D004348 2.1e-200 702.6 485 69.7
BolC7t44281H Brassica oleracea HOM05D001960 ORTHO05D007725 2.1e-200 702.6 485 69.7
VMungo1127G2029 Vigna mungo HOM05D001960 ORTHO05D007725 2.1e-200 702.6 435 75.4
CsaV3_5G037870 Cucumis sativus L. HOM05D001960 ORTHO05D007725 2.8e-200 702.2 447 74.5
Carub.0005s0723 Capsella rubella HOM05D001960 ORTHO05D007725 3.6e-200 701.8 485 69.7
AT3G28700 Arabidopsis thaliana HOM05D001960 ORTHO05D007725 4.7e-200 701.4 489 70.1
Sp2g17340 Schrenkiella parvula HOM05D001960 ORTHO05D007725 4.7e-200 701.4 490 69.8
TPR.G17186 Trifolium pratense HOM05D001960 ORTHO05D007725 8.0e-200 700.7 442 74.7
Psat7g177520 Pisum sativum HOM05D001960 ORTHO05D007725 2.3e-199 699.1 428 75.7
AL5G18340 Arabidopsis lyrata HOM05D001960 ORTHO05D007725 6.8e-199 697.6 488 69.5
PGR083G0481 Punica granatum HOM05D001960 ORTHO05D007725 6.8e-199 697.6 503 70.8
PSO832G0234 Papaver somniferum HOM05D001960 ORTHO05D007725 8.9e-199 697.2 442 75.8
FvH4_6g49351 Fragaria vesca HOM05D001960 ORTHO05D007725 1.5e-198 696.4 429 76.7
Ca_20945_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 2.0e-198 696.0 429 77.4
Lalb_Chr19g0139461 Lupinus albus HOM05D001960 ORTHO05D007725 5.8e-198 694.5 428 76.2
Sed0013706 Sechium edule HOM05D001960 ORTHO05D007725 5.8e-198 694.5 499 69.5
A06p40400 Brassica napus HOM05D001960 ORTHO05D004348 9.8e-198 693.7 485 69.1
BraA06t26958Z Brassica rapa HOM05D001960 ORTHO05D004348 9.8e-198 693.7 485 69.1
EL10Ac2g03435 Beta vulgaris HOM05D001960 ORTHO05D007725 1.3e-197 693.3 492 69.9
Sed0024340 Sechium edule HOM05D001960 ORTHO05D007725 3.7e-197 691.8 491 69.7
HanXRQChr09g0265611 Helianthus annuus HOM05D001960 ORTHO05D007725 4.9e-197 691.4 488 70.3
Ca_19010_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 1.1e-196 690.3 429 76.5
ClCG09G018410 Citrullus lanatus HOM05D001960 ORTHO05D007725 1.1e-196 690.3 526 66.9
AUR62031644 Chenopodium quinoa HOM05D001960 ORTHO05D007725 1.4e-196 689.9 445 73.3
Sc10g0003830 Simmondsia chinensis HOM05D001960 ORTHO05D007725 7.0e-196 687.6 487 70.4
Hund13245 Selenicereus undatus HOM05D001960 ORTHO05D007725 1.6e-195 686.4 462 72.7
Os01g0588800 Oryza sativa ssp. japonica HOM05D001960 ORTHO05D007725 2.0e-195 686.0 437 75.3
Lsat_1_v5_gn_4_179920 Lactuca sativa HOM05D001960 ORTHO05D007725 3.5e-195 685.3 492 69.1
AUR62038879 Chenopodium quinoa HOM05D001960 ORTHO05D007725 3.0e-194 682.2 458 71.4
Lj7A401T79 Lonicera japonica HOM05D001960 ORTHO05D007725 3.0e-194 682.2 445 73.9
MBI15_g37231_MAGBIO Magnolia biondii HOM05D001960 ORTHO05D007725 8.6e-194 680.6 471 72.2
Aa31LG2G4510 Aethionema arabicum HOM05D001960 ORTHO05D007725 7.3e-193 677.6 437 73.5
FAN14G4702 Fragaria x ananassa HOM05D001960 ORTHO05D007725 4.0e-191 671.8 427 74.9
Aqoxy3G03264 Aquilegia oxysepala HOM05D001960 ORTHO05D007725 1.4e-188 663.3 401 77.3
HPP92_022934 Vanilla planifolia HOM05D001960 ORTHO05D007725 2.5e-185 652.5 474 66.9
Gohir.A05G364200 Gossypium hirsutum HOM05D001960 ORTHO05D007725 7.3e-185 651.0 405 76.8
ATR1120G150 Amborella trichopoda HOM05D001960 ORTHO05D007725 4.7e-184 648.3 464 68.1
FAN02G2179 Fragaria x ananassa HOM05D001960 ORTHO05D007725 6.2e-184 647.9 542 62.2
CSS0006137 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 1.8e-183 646.4 378 81.0
Zm00001eb357440 Zea mays HOM05D001960 ORTHO05D007725 1.2e-182 643.7 428 72.7
vmacro05739 Vaccinium macrocarpon HOM05D001960 ORTHO05D007725 2.0e-182 642.9 464 71.3
unitig_747.g21836 Utricularia gibba HOM05D001960 ORTHO05D007725 6.4e-181 637.9 494 66.8
ECA232G3528 Erigeron canadensis HOM05D001960 ORTHO05D007725 1.9e-177 626.3 378 78.3
HPP92_022922 Vanilla planifolia HOM05D001960 ORTHO05D007725 5.2e-175 618.2 413 70.7
COL.COLO4_25201 Corchorus olitorius HOM05D001960 ORTHO05D007725 6.9e-175 617.8 490 66.1
PSO591G0496 Papaver somniferum HOM05D001960 ORTHO05D007725 3.4e-174 615.5 440 69.8
C09p03940 Brassica napus HOM05D001960 ORTHO05D007725 1.3e-170 603.6 440 65.5
BolC9t53325H Brassica oleracea HOM05D001960 ORTHO05D007725 3.3e-169 599.0 474 62.7
SEGI_03019 Sequoiadendron giganteum HOM05D001960 ORTHO05D007725 2.0e-166 589.7 485 60.8
Ah.12g065370 Amaranthus hybridus HOM05D001960 ORTHO05D007725 2.6e-166 589.3 394 70.6
Dinv33716 Davidia involucrata HOM05D001960 ORTHO05D007725 5.4e-164 581.6 341 80.6
Peaxi162Scf00129g00533 Petunia axillaris HOM05D001960 ORTHO05D007725 4.6e-163 578.6 390 70.8
ECA232G0063 Erigeron canadensis HOM05D001960 ORTHO05D007725 7.9e-163 577.8 378 74.1
Pp3c8_16780 Physcomitrium patens HOM05D001960 ORTHO05D007725 4.5e-158 562.0 479 58.0
BcaC04g23865 Brassica carinata HOM05D001960 ORTHO05D004348 7.4e-153 544.7 408 65.0
CDE05G2812 Ceratophyllum demersum HOM05D001960 ORTHO05D007725 5.5e-148 528.5 346 74.0
Mapoly0027s0012 Marchantia polymorpha HOM05D001960 ORTHO05D007725 1.9e-145 520.0 450 58.2
AagrBONN_evm.TU.Sc2ySwM_368.2217 Anthoceros agrestis HOM05D001960 ORTHO05D007725 3.7e-144 515.8 467 55.2
Dinv34989 Davidia involucrata HOM05D001960 ORTHO05D007725 1.3e-141 507.3 326 76.4
Hma1.2p1_1232F.1_g268890 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 1.9e-124 450.3 256 83.2
C04p40510 Brassica napus HOM05D001960 ORTHO05D007725 1.7e-117 427.2 297 68.4
BolC4t25631H Brassica oleracea HOM05D001960 ORTHO05D007725 1.7e-117 427.2 297 68.4
Ca_19017_v3 Cicer arietinum L. HOM05D000077 ORTHO05D002511 2.6e-113 413.3 348 60.6
SMO200G0063 Selaginella moellendorffii HOM05D001960 ORTHO05D007725 6.3e-112 408.7 391 52.9
C05p44890 Brassica napus HOM05D001960 ORTHO05D007725 3.0e-106 389.8 295 64.1
C08p31240 Brassica napus HOM05D001960 ORTHO05D007725 4.5e-102 375.9 285 63.5
BolC8t50105H Brassica oleracea HOM05D001960 ORTHO05D007725 3.8e-101 372.9 272 66.9
BcaC02g09250 Brassica carinata HOM05D001960 ORTHO05D007725 1.2e-99 367.9 264 67.0
C08p24890 Brassica napus HOM05D001960 ORTHO05D007725 3.6e-99 366.3 296 62.2
Migut.K01334 Erythranthe guttata HOM05D001960 ORTHO05D007725 3.5e-94 349.7 236 76.3
MCO09G443 Micromonas commoda HOM05D001960 ORTHO05D007725 3.1e-90 336.7 384 46.4
HPP92_022944 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.1e-82 311.6 208 71.6
CBR_g40650 Chara braunii HOM05D001960 ORTHO05D007725 3.2e-79 300.1 331 47.1
Cre02.g096400 Chlamydomonas reinhardtii HOM05D001960 ORTHO05D007725 3.9e-69 266.5 580 31.9
SHI22231 Sapria himalayana HOM05D001960 ORTHO05D007725 6.6e-69 265.8 250 54.8
Cfa026330 Carpinus fangiana HOM05D001960 ORTHO05D007725 7.6e-49 199.1 462 31.2
Dinv34987 Davidia involucrata HOM05D001960 ORTHO05D007725 6.7e-45 186.0 110 80.0
Actinidia23575 Actinidia chinensis HOM05D001960 ORTHO05D007725 2.7e-38 164.1 112 69.6
Hma1.2p1_1232F.1_g268870 Hydrangea macrophylla HOM05D001960 ORTHO05D014729 2.5e-36 157.5 114 71.1
AUR62031616 Chenopodium quinoa HOM05D000372 ORTHO05D002769 2.1e-30 137.9 111 57.7
Dinv06509 Davidia involucrata HOM05D001960 ORTHO05D014729 8.2e-27 125.9 112 61.6
CDE05G0334 Ceratophyllum demersum HOM05D000115 ORTHO05D000645 1.8e-21 108.2 60 75.0
A05p31150 Brassica napus HOM05D001960 ORTHO05D033473 8.8e-21 105.9 71 71.8
C04p14730 Brassica napus HOM05D001960 ORTHO05D014930 2.8e-19 100.9 69 65.2
BcaC02g11495 Brassica carinata HOM05D001960 ORTHO05D014930 3.7e-19 100.5 68 66.2
A01p26160 Brassica napus HOM05D001960 ORTHO05D014930 3.7e-19 100.5 69 65.2
C07p16020 Brassica napus HOM05D001960 ORTHO05D014930 3.7e-19 100.5 96 52.1
BraA02t06070Z Brassica rapa HOM05D001960 ORTHO05D014930 3.7e-19 100.5 69 65.2
A05p31140 Brassica napus HOM05D001960 ORTHO05D042754 8.2e-19 99.4 95 52.6
BolC3t20150H Brassica oleracea HOM05D001960 ORTHO05D014930 1.1e-18 99.0 69 63.8
BraA05t21956Z Brassica rapa HOM05D001960 ORTHO05D042754 1.1e-18 99.0 92 52.2
BolC5t33816H Brassica oleracea HOM05D001960 ORTHO05D014930 1.8e-18 98.2 69 63.8
BcaC05g28941 Brassica carinata HOM05D001960 ORTHO05D014930 2.4e-18 97.8 68 64.7
C07p16060 Brassica napus HOM05D001960 ORTHO05D021151 3.1e-18 97.4 69 63.8
HPP92_017638 Vanilla planifolia HOM05D003031 ORTHO05D003371 2.6e-17 94.4 53 77.4
HPP92_003669 Vanilla planifolia HOM05D001960 ORTHO05D007725 3.6e-14 84.0 69 62.3
Medtr5g075800 Medicago truncatula HOM05D001960 ORTHO05D258834 9.7e-12 75.9 85 49.4
Oeu056605.1 Olea europaea HOM05D001875 ORTHO05D002019 4.1e-10 70.5 61 63.9
GSVIVG01021633001 Vitis vinifera HOM05D001960 ORTHO05D439898 1.3e-08 65.5 48 64.6
Dinv25076 Davidia involucrata HOM05D001960 ORTHO05D033473 1.7e-08 65.1 45 71.1
Actinidia27488 Actinidia chinensis HOM05D001960 ORTHO05D058277 5.5e-07 60.1 67 59.7


User provided reference genes

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