Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12516 Striga asiatica HOM05D050296 ORTHO05D401533 1.5e-153 546.2 294 100.0
SGA_v2.0_scaffold642G53317 Striga asiatica HOM05D050296 ORTHO05D399403 1.1e-55 221.1 130 83.8
SGA_v2.0_scaffold34G13853 Striga asiatica HOM05D000292 ORTHO05D000172 6.5e-27 125.6 70 78.6
SGA_v2.0_scaffold34G13856 Striga asiatica HOM05D000292 ORTHO05D000172 3.6e-25 119.8 70 74.3
SGA_v2.0_scaffold70G23405 Striga asiatica HOM05D000292 ORTHO05D000172 3.1e-21 106.7 72 66.7
MSTRG.6575 Avicennia marina HOM05D000292 ORTHO05D000172 1.5e-15 87.8 68 55.9
Migut.M00205 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.7e-09 67.0 63 47.6
Migut.M00204 Erythranthe guttata HOM05D000292 ORTHO05D000172 8.0e-09 65.5 63 46.0
SalBow7G2263 Salvia bowleyana HOM05D000292 ORTHO05D000172 2.3e-08 63.9 70 44.3
Migut.M00455 Erythranthe guttata HOM05D000292 ORTHO05D000172 1.5e-07 61.2 67 35.8
Lalb_Chr03g0042911 Lupinus albus HOM05D000292 ORTHO05D000172 1.5e-07 61.2 73 37.0
SGA_v2.0_scaffold8G04584 Striga asiatica HOM05D000292 ORTHO05D000172 2.0e-07 60.8 70 38.6
Glyma.18G195000 Glycine max HOM05D000292 ORTHO05D000172 2.6e-07 60.5 63 39.7
TPR.G34879 Trifolium pratense HOM05D000292 ORTHO05D000172 4.4e-07 59.7 67 38.8
Medtr7g058710 Medicago truncatula HOM05D000292 ORTHO05D000172 5.7e-07 59.3 66 37.9
BcaNung05567 Brassica carinata HOM05D000292 ORTHO05D000172 7.5e-07 58.9 65 38.5
C07p58610 Brassica napus HOM05D000292 ORTHO05D000172 7.5e-07 58.9 65 38.5
Migut.C00012 Erythranthe guttata HOM05D000292 ORTHO05D000172 7.5e-07 58.9 67 40.3
SGA_v2.0_scaffold70G23406 Striga asiatica HOM05D000292 ORTHO05D000172 7.5e-07 58.9 73 39.7
VMungo0647G0748 Vigna mungo HOM05D000292 ORTHO05D000172 7.5e-07 58.9 65 40.0
Glyma.18G194700 Glycine max HOM05D000292 ORTHO05D000172 9.7e-07 58.5 72 36.1
Ca_20095_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 1.7e-06 57.8 69 42.0
TPR.G11727 Trifolium pratense HOM05D000292 ORTHO05D000172 1.7e-06 57.8 67 43.3
TPR.G18528 Trifolium pratense HOM05D000292 ORTHO05D000172 1.7e-06 57.8 67 37.3
Medtr7g058700 Medicago truncatula HOM05D000834 ORTHO05D000909 2.2e-06 57.4 65 35.4
Migut.F01309 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.8e-06 57.0 68 41.2
Migut.M00458 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.8e-06 57.0 67 37.3
Migut.M00575 Erythranthe guttata HOM05D000292 ORTHO05D000172 3.7e-06 56.6 69 37.7
Medtr7g062280 Medicago truncatula HOM05D000292 ORTHO05D000172 3.7e-06 56.6 81 35.8
TPR.G29509 Trifolium pratense HOM05D000292 ORTHO05D000172 3.7e-06 56.6 71 38.0
DCAR_015466 Daucus carota HOM05D000292 ORTHO05D000172 4.8e-06 56.2 69 37.7
arahy.Tifrunner.gnm1.ann1.PF7WV9 Arachis hypogaea HOM05D000292 ORTHO05D000172 6.3e-06 55.8 69 42.0
MSTRG.6572 Avicennia marina HOM05D000292 ORTHO05D000172 6.3e-06 55.8 69 34.8
DCAR_015469 Daucus carota HOM05D000292 ORTHO05D000172 8.2e-06 55.5 67 37.3


User provided reference genes

Program Settings