Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 5.7e-161 570.9 288 100.0
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 3.3e-116 422.2 288 77.4
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.1e-111 407.1 287 73.5
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 7.3e-108 394.4 293 69.6
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 6.0e-102 374.8 292 65.8
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 3.9e-101 372.1 292 66.1
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 3.9e-101 372.1 235 77.0
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 4.3e-100 368.6 226 79.6
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.1e-99 366.3 282 67.0
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 3.6e-99 365.5 255 72.2
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 4.8e-99 365.2 292 64.4
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 6.2e-99 364.8 256 71.9
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 8.1e-99 364.4 231 74.9
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 1.8e-98 363.2 256 71.5
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 5.3e-98 361.7 282 64.9
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 6.9e-98 361.3 288 63.9
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 4.5e-97 358.6 246 71.1
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 4.5e-97 358.6 274 66.4
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 5.8e-97 358.2 267 67.8
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.4e-95 353.6 225 76.0
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.4e-95 353.6 225 76.0
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.4e-95 353.6 287 63.4
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.9e-95 353.2 231 75.3
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.9e-95 353.2 231 75.3
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 2.4e-95 352.8 273 65.6
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 7.1e-95 351.3 230 73.5
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.2e-94 350.5 282 63.1
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.2e-94 350.5 234 72.6
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.6e-94 350.1 231 74.5
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.1e-94 349.7 256 68.8
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.1e-94 349.7 226 74.3
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 4.6e-94 348.6 273 64.8
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 4.6e-94 348.6 266 65.0
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 4.6e-94 348.6 273 64.1
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 7.9e-94 347.8 246 69.9
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 2.3e-93 346.3 277 63.9
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 5.1e-93 345.1 247 70.0
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 5.1e-93 345.1 247 70.0
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.1e-92 344.0 234 69.7
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 1.1e-92 344.0 246 68.7
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.9e-92 343.2 293 62.8
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 2.5e-92 342.8 270 65.6
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 4.3e-92 342.0 230 71.3
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 7.4e-92 341.3 231 71.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 1.6e-91 340.1 280 63.2
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 2.1e-91 339.7 240 71.2
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 6.2e-91 338.2 248 66.9
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 8.1e-91 337.8 231 69.7
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 8.1e-91 337.8 233 71.7
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 1.1e-90 337.4 236 69.1
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.4e-90 337.0 268 63.4
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 2.4e-90 336.3 288 59.7
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 2.4e-90 336.3 288 59.7
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 2.4e-90 336.3 288 59.7
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 2.4e-90 336.3 281 63.0
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 5.3e-90 335.1 266 63.2
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 6.9e-90 334.7 230 69.6
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 6.9e-90 334.7 234 68.8
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 9.0e-90 334.3 234 68.8
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 1.2e-89 334.0 253 66.0
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.2e-89 334.0 230 69.6
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.5e-89 333.6 274 61.3
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.0e-89 333.2 230 69.6
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 3.4e-89 332.4 270 63.0
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 4.5e-89 332.0 286 60.8
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 4.5e-89 332.0 236 68.2
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 4.5e-89 332.0 236 68.2
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.7e-88 330.1 249 66.3
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 1.7e-88 330.1 254 64.6
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.7e-88 330.1 230 68.7
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 2.2e-88 329.7 270 62.6
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.2e-88 329.7 271 62.7
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 3.8e-88 328.9 271 62.7
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 3.8e-88 328.9 230 68.7
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 4.9e-88 328.6 246 66.7
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 4.9e-88 328.6 270 62.2
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 4.9e-88 328.6 286 62.2
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.9e-87 326.6 236 67.4
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 2.5e-87 326.2 286 61.9
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 3.2e-87 325.9 230 67.8
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 7.1e-87 324.7 236 67.4
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 1.2e-86 323.9 222 71.6
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.2e-86 323.9 235 67.2
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 3.5e-86 322.4 236 66.9
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 1.0e-85 320.9 236 66.5
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 2.3e-85 319.7 233 66.5
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 3.9e-85 318.9 233 67.0
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 5.1e-85 318.5 264 61.0
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 5.7e-84 315.1 314 53.8
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 3.7e-83 312.4 219 67.6
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 3.7e-83 312.4 229 67.2
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 8.2e-83 311.2 230 65.2
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 4.1e-82 308.9 235 63.0
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 9.0e-82 307.8 251 62.5
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.0e-80 304.3 237 62.9
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 3.6e-78 295.8 226 63.7
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 4.6e-78 295.4 274 59.1
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 8.5e-72 274.6 231 61.9
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 2.5e-71 273.1 183 69.9
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.2e-65 254.2 243 53.9
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.4e-63 247.3 274 50.0
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 7.9e-62 241.5 265 50.9
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 3.3e-60 236.1 131 86.3
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 4.1e-50 202.6 168 61.9
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 4.5e-49 199.1 203 49.3
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 8.5e-48 194.9 156 62.2
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 2.1e-46 190.3 195 48.2
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 6.1e-46 188.7 205 51.2
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.8e-45 187.2 193 47.7
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 2.3e-45 186.8 188 53.7
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 2.4e-42 176.8 192 47.9
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.1e-39 167.9 140 62.9
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.9e-39 167.2 204 45.6
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 7.2e-39 165.2 143 56.6
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 2.3e-32 143.7 87 71.3
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 6.8e-29 132.1 91 70.3
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 9.2e-26 121.7 91 65.9
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.1e-23 114.8 84 69.0
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 2.3e-21 107.1 124 49.2
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.6e-17 94.4 52 80.8
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 5.6e-15 85.9 190 28.9
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 4.0e-13 79.7 51 68.6
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 3.9e-08 63.2 134 34.3
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 8.6e-08 62.0 34 85.3
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.5e-07 61.2 39 69.2


User provided reference genes

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