Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 7.4e-90 334.0 180 100.0
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.0e-35 154.1 150 68.7
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 6.8e-35 151.4 173 54.9
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 8.3e-33 144.4 152 58.6
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 3.5e-31 139.0 152 56.6
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 2.5e-29 132.9 174 48.9
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.6e-28 130.2 151 50.3
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 4.7e-28 128.6 169 47.9
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 3.0e-27 125.9 145 51.0
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 3.0e-27 125.9 183 44.8
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 4.0e-27 125.6 180 47.2
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 8.8e-27 124.4 169 47.3
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 1.5e-26 123.6 148 50.0
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.4e-26 122.5 167 46.7
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 5.7e-26 121.7 152 44.7
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 5.7e-26 121.7 202 45.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 7.5e-26 121.3 151 45.7
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.7e-25 120.2 188 41.5
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.2e-25 119.8 207 43.5
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 2.2e-25 119.8 208 43.3
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 6.3e-25 118.2 176 40.3
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 6.3e-25 118.2 150 46.0
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 1.1e-24 117.5 167 43.7
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.4e-24 117.1 170 45.3
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 5.4e-24 115.2 144 46.5
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 5.4e-24 115.2 162 46.3
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 9.2e-24 114.4 169 44.4
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.0e-22 110.9 167 44.3
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.0e-22 110.9 169 43.2
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.3e-22 110.5 153 47.1
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 1.7e-22 110.2 168 45.2
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.3e-22 109.8 136 45.6
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 2.3e-22 109.8 148 46.6
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.5e-21 107.1 139 44.6
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.5e-21 107.1 161 42.2
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.5e-21 107.1 145 48.3
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.9e-21 106.7 161 44.7
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 2.5e-21 106.3 137 47.4
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 2.5e-21 106.3 175 42.9
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 2.5e-21 106.3 175 39.4
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.3e-21 105.9 175 41.7
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 3.3e-21 105.9 157 45.2
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 4.3e-21 105.5 132 43.9
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 4.3e-21 105.5 153 48.4
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 5.6e-21 105.1 158 42.4
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.6e-21 105.1 159 42.1
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 5.6e-21 105.1 159 42.1
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 7.3e-21 104.8 160 44.4
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 7.3e-21 104.8 159 42.1
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 1.2e-20 104.0 161 41.0
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 1.6e-20 103.6 158 41.1
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.1e-20 103.2 159 45.3
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 2.1e-20 103.2 176 37.5
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 2.8e-20 102.8 156 42.3
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.6e-20 102.4 176 41.5
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 3.6e-20 102.4 148 44.6
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 4.7e-20 102.1 138 46.4
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 6.1e-20 101.7 169 43.2
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 6.1e-20 101.7 153 47.1
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 8.0e-20 101.3 185 35.1
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 1.0e-19 100.9 175 37.1
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 1.0e-19 100.9 135 42.2
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.4e-19 100.5 176 39.8
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 2.3e-19 99.8 178 33.7
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 5.2e-19 98.6 158 43.0
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 6.8e-19 98.2 175 39.4
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 6.8e-19 98.2 150 42.0
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 6.8e-19 98.2 176 38.1
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 6.8e-19 98.2 190 38.4
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 8.9e-19 97.8 163 41.1
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 8.9e-19 97.8 191 36.1
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 8.9e-19 97.8 168 35.7
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 8.9e-19 97.8 152 44.7
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.2e-18 97.4 128 44.5
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 2.0e-18 96.7 148 48.0
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 4.4e-18 95.5 164 39.0
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 4.4e-18 95.5 160 38.8
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 5.7e-18 95.1 177 37.3
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 7.5e-18 94.7 150 43.3
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 7.5e-18 94.7 172 43.6
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 9.8e-18 94.4 144 36.1
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.3e-17 94.0 160 38.1
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.3e-17 94.0 190 35.3
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.7e-17 93.6 162 40.7
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.7e-17 93.6 156 41.7
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.7e-17 93.6 156 41.7
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 2.9e-17 92.8 189 33.3
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 3.7e-17 92.4 158 39.9
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 3.7e-17 92.4 144 34.0
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 4.9e-17 92.0 156 41.0
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 6.4e-17 91.7 173 39.9
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 6.4e-17 91.7 194 36.1
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 1.4e-16 90.5 192 34.9
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 2.4e-16 89.7 158 38.6
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 2.4e-16 89.7 158 38.6
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.4e-16 89.7 168 42.3
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 4.1e-16 89.0 142 45.1
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 4.1e-16 89.0 200 33.0
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 9.2e-16 87.8 169 35.5
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 1.2e-15 87.4 165 31.5
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 2.0e-15 86.7 210 36.2
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 3.5e-15 85.9 225 37.3
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 3.5e-15 85.9 206 33.5
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 3.5e-15 85.9 136 39.7
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 3.5e-15 85.9 127 43.3
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 5.9e-15 85.1 140 39.3
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 3.0e-14 82.8 52 69.2
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 5.0e-14 82.0 136 37.5
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 8.6e-14 81.3 139 38.8
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.1e-13 80.9 188 35.1
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.5e-13 80.5 152 36.2
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 4.3e-13 79.0 187 38.5
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 9.5e-13 77.8 212 34.0
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 9.5e-13 77.8 124 37.1
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.2e-12 77.4 203 35.5
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 1.2e-12 77.4 124 37.9
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 3.6e-12 75.9 207 33.3
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 5.2e-11 72.0 50 58.0
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 2.0e-10 70.1 209 34.0
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 2.6e-10 69.7 191 35.1
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 5.8e-10 68.6 95 35.8
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 7.5e-10 68.2 165 35.8
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 9.8e-10 67.8 68 52.9
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 9.8e-10 67.8 75 46.7
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 3.7e-09 65.9 145 32.4
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.7e-09 65.9 133 33.8
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 8.3e-09 64.7 130 33.8
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 2.4e-08 63.2 85 44.7
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 2.4e-08 63.2 85 44.7
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 3.2e-08 62.8 47 57.4
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 3.2e-08 62.8 146 34.9


User provided reference genes

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