Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-273 946.0 467 100.0
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-129 467.2 479 55.9
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 6.1e-88 328.9 415 48.4
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-86 324.7 253 66.4
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 1.5e-62 244.6 514 30.2
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-61 239.2 433 33.3
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-58 231.5 500 31.6
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-57 227.6 419 33.7
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-56 223.0 506 30.0
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-53 212.2 497 27.6
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-51 208.4 402 38.6
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-48 196.8 360 34.4
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-47 194.9 390 31.3
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-45 185.7 499 29.3
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.9e-44 184.5 427 28.1
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-43 181.8 484 26.0
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 1.2e-43 181.8 224 44.2
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 3.5e-43 180.3 224 43.8
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 4.6e-43 179.9 224 43.8
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-43 179.5 337 35.0
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-43 179.5 434 29.3
SGA_v2.0_scaffold1G00564 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-42 178.7 139 66.2
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-42 177.9 455 27.5
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 6.6e-42 176.0 503 28.6
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-41 172.9 281 36.3
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-39 166.8 461 26.5
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 9.0e-39 165.6 451 28.4
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.9e-36 157.9 268 34.7
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-36 157.1 451 27.9
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-35 154.1 474 25.1
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-34 150.6 291 32.3
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 3.0e-34 150.6 227 40.5
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 8.7e-34 149.1 441 25.2
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 8.7e-34 149.1 443 26.6
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 1.5e-33 148.3 345 27.8
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-33 148.3 264 34.1
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 4.3e-33 146.7 304 30.6
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-29 134.4 467 24.4
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-28 130.6 322 30.1
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-26 124.8 368 26.1
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-26 123.6 325 28.9
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-25 122.1 280 32.9
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-25 120.9 121 48.8
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 3.3e-25 120.6 157 39.5
SGA_v2.0_scaffold87G27151 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-25 120.2 205 40.5
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 6.3e-24 116.3 450 26.2
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-23 115.5 412 24.5
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-23 114.0 108 50.9
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-23 114.0 367 26.4
SGA_v2.0_scaffold6G03342 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-23 113.6 93 65.6
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-21 107.5 318 26.4
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 3.8e-21 107.1 185 35.7
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-20 105.5 134 38.1
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 1.9e-20 104.8 143 35.7
SGA_v2.0_scaffold1575G53988 Striga asiatica HOM05D006612 ORTHO05D404833 2.5e-20 104.4 160 41.9
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.5e-19 100.5 367 22.9
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 7.9e-19 99.4 375 23.5
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-19 99.4 123 39.8
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 1.8e-18 98.2 233 24.9
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-18 97.1 386 22.3
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-17 92.8 435 23.7
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 9.7e-17 92.4 420 21.7
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-17 92.4 121 40.5
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 4.8e-16 90.1 105 42.9
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-15 89.0 128 38.3
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 2.4e-15 87.8 412 21.4
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 3.1e-15 87.4 121 35.5
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-15 87.4 123 37.4
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-14 85.5 81 46.9
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 2.6e-14 84.3 464 22.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 3.4e-14 84.0 355 22.0
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 3.4e-14 84.0 211 28.4
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 5.9e-14 83.2 463 22.2
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 7.7e-14 82.8 458 22.1
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 1.0e-13 82.4 104 40.4
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-13 81.3 295 26.1
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 3.8e-13 80.5 385 25.2
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.1e-12 79.0 193 26.4
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 1.9e-12 78.2 297 22.9
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 2.5e-12 77.8 190 28.9
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-12 77.8 124 31.5
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-12 77.4 245 23.7
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 5.5e-12 76.6 280 25.7
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 5.5e-12 76.6 435 21.6
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-11 75.1 201 26.9
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-11 74.3 362 23.2
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-11 74.3 292 24.7
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-11 73.9 122 32.0
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-10 71.6 82 41.5
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 2.3e-10 71.2 386 20.7
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-10 70.5 70 41.4
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 5.1e-10 70.1 524 21.4
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 1.5e-09 68.6 185 24.9
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-09 68.2 83 37.3
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 2.5e-09 67.8 239 23.4
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-09 67.4 280 24.6
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 5.7e-09 66.6 353 22.7
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 7.4e-09 66.2 433 21.7
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 9.7e-09 65.9 198 22.2
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.7e-09 65.9 279 24.7
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 1.3e-08 65.5 187 22.5
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-08 65.1 200 26.0
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-08 64.3 204 24.5
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 4.8e-08 63.5 278 23.0
CANSAT35G0072 Cannabis sativa HOM05D006612 ORTHO05D010384 4.8e-08 63.5 196 24.5
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 6.3e-08 63.2 345 20.3
Cc09_g07530 Coffea canephora HOM05D006612 ORTHO05D009014 8.2e-08 62.8 144 24.3
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.1e-07 62.4 240 22.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-07 62.4 321 20.2
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-07 62.4 122 29.5
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 1.4e-07 62.0 111 31.5
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.4e-07 62.0 342 23.1
SGA_v2.0_scaffold116G32264 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-07 61.6 102 36.3
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-07 61.2 273 25.6
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 4.1e-07 60.5 116 33.6
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 5.3e-07 60.1 273 25.6
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 6.9e-07 59.7 155 28.4
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 9.1e-07 59.3 319 21.3
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.1e-07 59.3 185 22.7
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 9.1e-07 59.3 66 40.9
Cc07_g03400 Coffea canephora HOM05D006612 ORTHO05D009014 1.5e-06 58.5 230 23.5
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-06 57.8 273 20.9
Cc10_g00450 Coffea canephora HOM05D004506 ORTHO05D005894 3.4e-06 57.4 224 24.1
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 3.4e-06 57.4 115 33.0
SEGI_23554 Sequoiadendron giganteum HOM05D000824 ORTHO05D003555 3.4e-06 57.4 246 24.4
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 57.4 115 28.7
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 4.5e-06 57.0 115 33.9
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.5e-06 57.0 115 33.0
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 4.5e-06 57.0 312 24.4
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-06 57.0 424 21.0
SGA_v2.0_scaffold330G48902 Striga asiatica HOM05D015626 ORTHO05D019382 5.9e-06 56.6 64 46.9
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 7.7e-06 56.2 115 33.0


User provided reference genes

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