Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 1.3e-81 306.6 193 100.0
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.5e-51 206.8 186 61.8
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 4.8e-47 191.8 192 64.1
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 7.2e-43 177.9 189 56.1
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.8e-41 173.3 191 54.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.6e-37 160.2 185 56.2
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.8e-33 144.8 180 60.0
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 8.6e-28 127.9 182 53.8
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.9e-27 126.7 188 42.0
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 9.5e-27 124.4 193 39.9
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.2e-26 124.0 190 40.5
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 3.6e-26 122.5 191 40.8
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.6e-26 122.5 179 47.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.8e-25 120.2 190 38.9
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 2.3e-25 119.8 181 56.4
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.3e-25 119.8 183 48.6
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 3.1e-25 119.4 180 45.6
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.0e-25 119.0 183 49.7
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 5.2e-25 118.6 182 43.4
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 6.8e-25 118.2 183 45.4
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 6.8e-25 118.2 179 43.6
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 8.9e-25 117.9 185 49.2
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.5e-24 117.1 182 55.5
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 2.0e-24 116.7 186 46.8
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 4.4e-24 115.5 179 50.3
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 4.4e-24 115.5 184 39.7
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 9.8e-24 114.4 179 41.9
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-23 114.0 179 43.6
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.3e-23 114.0 180 52.8
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 1.7e-23 113.6 183 41.0
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.7e-23 113.6 186 38.7
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 1.7e-23 113.6 182 37.9
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.2e-23 113.2 182 45.6
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.9e-23 112.8 182 42.3
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 3.7e-23 112.5 179 40.2
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 3.7e-23 112.5 183 38.3
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 6.4e-23 111.7 183 37.2
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.4e-22 110.5 180 41.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.9e-22 110.2 179 41.3
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 2.4e-22 109.8 182 37.4
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 3.2e-22 109.4 184 38.6
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 3.2e-22 109.4 179 40.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 7.0e-22 108.2 192 38.0
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 7.0e-22 108.2 183 36.1
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 9.2e-22 107.8 196 42.9
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.2e-21 107.5 180 50.6
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.6e-21 107.1 187 39.6
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.0e-21 106.7 179 39.1
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.7e-21 106.3 178 39.9
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 2.7e-21 106.3 180 40.6
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 7.8e-21 104.8 179 39.7
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 7.8e-21 104.8 180 38.9
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.3e-20 104.0 199 35.7
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.7e-20 103.6 185 37.3
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 3.0e-20 102.8 187 35.8
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.0e-20 102.8 179 39.7
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 3.9e-20 102.4 180 38.9
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 5.0e-20 102.1 189 37.0
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 5.0e-20 102.1 189 37.0
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 5.0e-20 102.1 179 54.2
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.6e-20 101.7 182 37.4
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 6.6e-20 101.7 179 40.2
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 6.6e-20 101.7 179 36.3
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.1e-19 100.9 182 35.2
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.1e-19 100.9 189 46.0
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.5e-19 100.5 191 44.5
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.9e-19 100.1 190 50.0
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.5e-19 99.8 213 45.1
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.3e-19 99.4 191 45.5
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.3e-19 99.4 191 44.5
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 3.3e-19 99.4 181 52.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 3.3e-19 99.4 185 37.3
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.3e-19 99.0 191 44.5
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 5.6e-19 98.6 179 36.9
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 9.5e-19 97.8 179 39.1
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-18 97.4 182 35.2
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 2.1e-18 96.7 183 33.3
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 3.6e-18 95.9 126 49.2
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 4.7e-18 95.5 188 35.1
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 4.7e-18 95.5 178 52.8
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 8.1e-18 94.7 181 40.3
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.1e-17 94.4 181 40.3
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.8e-17 93.6 180 47.8
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.8e-17 93.6 181 48.6
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 1.8e-17 93.6 181 48.6
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.8e-17 93.6 183 52.5
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.3e-17 93.2 179 44.7
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 5.2e-17 92.0 181 34.8
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 5.2e-17 92.0 179 48.0
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.5e-16 90.5 179 45.8
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.5e-16 90.5 182 34.6
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 2.0e-16 90.1 178 34.3
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 3.4e-16 89.4 180 50.6
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 5.8e-16 88.6 182 34.6
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 7.5e-16 88.2 126 45.2
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 9.8e-16 87.8 180 31.7
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 9.8e-16 87.8 180 31.7
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 1.7e-15 87.0 180 32.2
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 2.2e-15 86.7 180 32.2
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.2e-15 86.7 219 37.9
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 2.9e-15 86.3 180 31.1
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.9e-15 86.3 185 37.3
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 8.3e-15 84.7 179 32.4
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.1e-14 84.3 185 37.3
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.4e-14 84.0 184 50.5
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 5.4e-14 82.0 180 31.1
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-13 80.9 179 31.8
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.2e-13 80.9 179 31.8
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 2.1e-13 80.1 65 56.9
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 2.7e-13 79.7 179 33.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 3.5e-13 79.3 181 36.5
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.0e-12 77.8 183 32.2
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 1.0e-12 77.8 182 31.3
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 1.0e-12 77.8 182 31.3
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.3e-12 77.4 179 31.3
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 3.0e-12 76.3 205 39.5
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.9e-12 75.9 179 29.6
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 6.6e-12 75.1 131 51.9
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.1e-11 74.3 165 30.9
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 4.3e-11 72.4 182 35.7
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 4.3e-11 72.4 172 30.2
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 7.3e-11 71.6 170 29.4
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 6.8e-09 65.1 110 39.1
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 8.9e-09 64.7 182 41.8
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-08 64.3 50 58.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.5e-08 63.9 54 63.0
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 5.8e-08 62.0 83 67.5
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 9.9e-08 61.2 54 53.7
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 1.7e-07 60.5 135 45.2


User provided reference genes

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