Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 8.3e-64 246.9 127 100.0
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 2.9e-32 142.1 127 70.1
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 3.8e-16 88.6 137 51.8
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 1.8e-13 79.7 136 43.4
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 7.4e-12 74.3 143 39.2
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 3.7e-11 72.0 125 47.2
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 3.1e-10 68.9 132 42.4
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 5.3e-10 68.2 126 42.9
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 5.3e-10 68.2 143 37.8
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.2e-09 67.0 127 42.5
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 2.6e-09 65.9 141 42.6
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.4e-09 65.5 127 41.7
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.4e-09 65.5 127 42.5
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 7.7e-09 64.3 113 43.4
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 1.0e-08 63.9 130 42.3
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.0e-08 63.9 133 42.1
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.3e-08 63.5 127 39.4
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.3e-08 63.5 141 41.1
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 2.2e-08 62.8 135 40.7
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.9e-08 62.4 127 40.9
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 5.0e-08 61.6 127 42.5
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 1.4e-07 60.1 83 47.0
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 3.2e-07 58.9 163 38.7
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 3.2e-07 58.9 127 35.4
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 5.5e-07 58.2 128 41.4
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 5.5e-07 58.2 131 37.4
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 5.5e-07 58.2 135 42.2
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 5.5e-07 58.2 136 41.2
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 7.2e-07 57.8 128 40.6
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 7.2e-07 57.8 68 51.5
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 9.4e-07 57.4 113 39.8
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 9.4e-07 57.4 68 54.4
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 1.2e-06 57.0 93 44.1
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 1.2e-06 57.0 67 58.2
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.2e-06 57.0 69 53.6
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.6e-06 56.6 72 55.6
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 1.6e-06 56.6 131 39.7
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 2.1e-06 56.2 133 39.8
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 2.1e-06 56.2 68 57.4
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 3.6e-06 55.5 67 52.2
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 7.9e-06 54.3 128 36.7
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 7.9e-06 54.3 68 50.0


User provided reference genes

Program Settings