Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-72 276.2 139 100.0
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 1.8e-67 259.2 139 93.5
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 1.5e-66 256.1 139 93.5
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 1.5e-66 256.1 139 93.5
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 3.4e-66 255.0 139 92.8
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 8.3e-65 250.4 139 91.4
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 8.3e-65 250.4 139 91.4
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 7.5e-58 227.3 126 89.7
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 7.5e-58 227.3 125 91.2
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-50 202.6 111 87.4
SGA_v2.0_scaffold30G12563 Striga asiatica HOM05D011630 ORTHO05D002863 3.6e-20 102.1 69 76.8
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 1.5e-13 80.1 98 45.9
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 9.6e-13 77.4 63 54.0
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 1.3e-12 77.0 66 54.5
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 5.8e-10 68.2 119 34.5
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 1.3e-09 67.0 66 48.5
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 3.2e-08 62.4 103 37.9
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-08 62.0 45 53.3
CANSAT54G0644 Cannabis sativa HOM05D015495 ORTHO05D024749 2.7e-07 59.3 91 35.2
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 6.0e-07 58.2 45 48.9
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 7.9e-07 57.8 54 48.1
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 1.3e-06 57.0 60 48.3
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-06 57.0 112 31.2
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 1.3e-06 57.0 47 57.4
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 56.6 60 41.7
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 56.6 60 41.7
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-06 56.2 119 32.8
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 2.3e-06 56.2 125 32.8
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 3.0e-06 55.8 141 30.5
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 3.0e-06 55.8 125 32.8
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 3.9e-06 55.5 44 50.0
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 3.9e-06 55.5 59 42.4
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.9e-06 55.5 60 41.7
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 3.9e-06 55.5 54 46.3
AUR62042426 Chenopodium quinoa HOM05D005931 ORTHO05D005553 5.1e-06 55.1 94 30.9
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-06 55.1 81 35.8
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.1e-06 55.1 103 34.0
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 6.6e-06 54.7 106 31.1
AUR62026894 Chenopodium quinoa HOM05D005931 ORTHO05D005553 6.6e-06 54.7 94 30.9
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 6.6e-06 54.7 60 40.0
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 6.6e-06 54.7 45 48.9
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 6.6e-06 54.7 135 32.6
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 6.6e-06 54.7 52 51.9
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 6.6e-06 54.7 48 50.0
AUR62020745 Chenopodium quinoa HOM05D005931 ORTHO05D005553 8.7e-06 54.3 99 29.3
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 8.7e-06 54.3 136 28.7
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-06 54.3 60 40.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 8.7e-06 54.3 45 46.7
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 8.7e-06 54.3 136 33.8


User provided reference genes

Program Settings