Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.1e-65 253.1 125 100.0
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.2e-48 195.7 122 82.0
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 8.8e-42 173.7 119 73.1
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 3.0e-34 148.7 127 64.6
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 9.8e-33 143.7 122 64.8
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 2.4e-31 139.0 115 67.0
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 2.0e-30 136.0 127 59.8
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 2.0e-30 136.0 127 59.8
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.7e-30 135.6 120 64.2
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 7.8e-30 134.0 111 59.5
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 2.3e-29 132.5 119 60.5
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 2.3e-29 132.5 109 63.3
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 2.9e-29 132.1 113 60.2
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.9e-29 132.1 96 72.9
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 3.8e-29 131.7 112 63.4
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 6.6e-29 131.0 110 62.7
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 6.6e-29 131.0 96 72.9
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 6.6e-29 131.0 96 72.9
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 8.6e-29 130.6 88 69.3
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 2.5e-28 129.0 90 68.9
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.6e-28 127.9 118 60.2
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 9.5e-28 127.1 87 65.5
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 3.6e-27 125.2 86 68.6
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 3.6e-27 125.2 123 58.5
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 3.6e-27 125.2 79 72.2
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 4.7e-27 124.8 97 67.0
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 4.7e-27 124.8 96 66.7
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 4.7e-27 124.8 104 63.5
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 1.0e-26 123.6 71 77.5
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 1.8e-26 122.9 110 62.7
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 2.3e-26 122.5 67 79.1
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 4.0e-26 121.7 105 61.0
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 4.0e-26 121.7 74 75.7
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 6.8e-26 120.9 107 60.7
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 8.9e-26 120.6 110 59.1
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.2e-25 120.2 100 63.0
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.6e-25 119.0 92 65.2
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 3.4e-25 118.6 120 55.0
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.4e-25 118.6 105 62.9
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 3.4e-25 118.6 105 62.9
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 4.4e-25 118.2 98 61.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 7.5e-25 117.5 102 63.7
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 9.8e-25 117.1 99 62.6
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 9.8e-25 117.1 111 56.8
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 9.8e-25 117.1 122 54.9
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.7e-24 116.3 112 59.8
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 2.2e-24 115.9 71 73.2
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 2.9e-24 115.5 80 70.0
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 3.7e-24 115.2 112 57.1
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 4.9e-24 114.8 67 79.1
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 6.4e-24 114.4 65 78.5
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 6.4e-24 114.4 97 61.9
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 8.3e-24 114.0 125 53.6
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 8.3e-24 114.0 73 68.5
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.1e-23 113.6 108 56.5
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.1e-23 113.6 96 58.3
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 1.4e-23 113.2 123 51.2
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.4e-23 113.2 110 57.3
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.9e-23 112.8 71 71.8
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.9e-23 112.8 100 62.0
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 2.4e-23 112.5 87 63.2
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 2.4e-23 112.5 90 62.2
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 3.2e-23 112.1 95 65.3
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.2e-23 112.1 83 66.3
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 3.2e-23 112.1 86 66.3
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 4.1e-23 111.7 79 70.9
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 4.1e-23 111.7 112 58.0
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 5.4e-23 111.3 94 62.8
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 5.4e-23 111.3 100 61.0
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 5.4e-23 111.3 72 68.1
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.0e-23 110.9 96 61.5
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 9.2e-23 110.5 102 56.9
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 9.2e-23 110.5 85 64.7
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.2e-22 110.2 112 57.1
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 2.0e-22 109.4 95 63.2
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 2.0e-22 109.4 94 60.6
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.0e-22 109.4 105 57.1
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.7e-22 109.0 112 57.1
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 2.7e-22 109.0 120 55.0
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 3.5e-22 108.6 95 62.1
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.5e-22 108.6 91 57.1
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 3.5e-22 108.6 100 60.0
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 3.5e-22 108.6 109 56.0
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 4.6e-22 108.2 107 57.0
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 6.0e-22 107.8 94 61.7
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 6.0e-22 107.8 98 60.2
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.0e-21 107.1 108 56.5
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.0e-21 107.1 92 60.9
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.7e-21 106.3 111 53.2
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 2.3e-21 105.9 89 57.3
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 6.6e-21 104.4 100 56.0
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 8.6e-21 104.0 59 74.6
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.9e-20 102.8 112 52.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.5e-20 102.4 81 64.2
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 4.3e-20 101.7 112 56.2
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 4.7e-19 98.2 151 41.7
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 8.0e-19 97.4 92 56.5
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.6e-17 92.4 86 58.1
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.7e-16 89.7 92 52.2
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.2e-14 83.6 55 63.6
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.0e-13 80.5 101 44.6
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 3.0e-13 79.0 80 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.4e-10 70.1 78 48.7
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 7.5e-09 64.3 65 52.3


User provided reference genes

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