Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 2.2e-123 445.7 224 100.0
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 3.0e-101 372.1 222 87.4
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 6.4e-75 284.6 231 68.8
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 4.1e-74 282.0 234 65.8
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 6.0e-65 251.5 220 64.1
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 7.8e-65 251.1 232 62.1
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.0e-61 238.8 172 72.1
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 3.4e-60 235.7 180 68.3
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 5.8e-60 235.0 172 70.3
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 7.6e-60 234.6 180 68.9
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 9.9e-60 234.2 182 68.1
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 1.3e-59 233.8 185 68.6
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 1.3e-59 233.8 172 72.1
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 1.3e-59 233.8 172 72.1
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 1.7e-59 233.4 185 66.5
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.9e-59 232.6 189 66.1
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.9e-59 232.6 189 66.1
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 2.9e-59 232.6 189 66.1
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 2.9e-59 232.6 179 68.2
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 3.7e-59 232.3 186 65.6
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.9e-59 231.9 172 70.9
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 4.9e-59 231.9 172 71.5
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 8.4e-59 231.1 179 67.6
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 8.4e-59 231.1 215 60.0
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 2.4e-58 229.6 204 59.8
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 2.4e-58 229.6 189 65.6
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 2.4e-58 229.6 182 68.7
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 3.2e-58 229.2 209 61.2
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 3.2e-58 229.2 213 59.2
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 9.2e-58 227.6 180 66.1
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.6e-57 226.9 192 63.0
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 2.1e-57 226.5 186 65.6
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.7e-57 226.1 171 69.0
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 2.7e-57 226.1 180 66.1
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 3.5e-57 225.7 205 62.0
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 4.6e-57 225.3 173 67.6
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 4.6e-57 225.3 196 63.3
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 6.0e-57 224.9 227 56.4
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 6.0e-57 224.9 173 68.8
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 6.0e-57 224.9 179 65.4
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 7.8e-57 224.6 183 64.5
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 7.8e-57 224.6 179 65.9
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.0e-56 224.2 172 68.0
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 1.3e-56 223.8 217 59.0
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 1.7e-56 223.4 216 56.5
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.7e-56 223.4 195 61.0
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.7e-56 223.4 221 57.5
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 2.3e-56 223.0 226 56.2
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 3.9e-56 222.2 172 66.9
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 3.9e-56 222.2 179 64.2
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 3.9e-56 222.2 182 64.3
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 3.9e-56 222.2 189 66.1
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 3.9e-56 222.2 194 60.8
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 6.6e-56 221.5 227 55.5
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 6.6e-56 221.5 227 55.5
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.1e-55 220.7 180 65.0
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.3e-55 219.2 179 65.4
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 4.3e-55 218.8 179 64.8
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 4.3e-55 218.8 176 67.6
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 4.3e-55 218.8 179 65.9
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 7.3e-55 218.0 186 62.4
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.2e-54 217.2 167 67.7
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.2e-54 217.2 177 65.0
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 1.2e-54 217.2 167 68.3
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 1.6e-54 216.9 175 65.1
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 2.1e-54 216.5 140 77.1
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 4.7e-54 215.3 180 62.8
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 6.2e-54 214.9 210 59.5
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 2.4e-53 213.0 183 63.4
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 5.2e-53 211.8 183 61.7
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.2e-52 210.7 186 61.3
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 4.4e-52 208.8 159 69.8
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 5.8e-52 208.4 168 64.9
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 7.6e-52 208.0 174 63.8
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 2.2e-51 206.5 245 52.2
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.8e-51 205.7 158 69.0
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.8e-51 205.7 158 69.0
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 4.9e-51 205.3 171 61.4
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 4.9e-51 205.3 180 62.2
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 8.4e-51 204.5 187 60.4
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 4.2e-50 202.2 171 61.4
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 7.1e-50 201.4 178 60.1
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 1.0e-48 197.6 194 56.2
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.6e-46 190.3 159 62.3
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.6e-46 190.3 131 72.5
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.1e-45 187.6 166 64.5
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 2.4e-45 186.4 158 62.0
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 4.0e-45 185.7 149 65.1
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 4.0e-45 185.7 171 57.9
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.5e-44 183.7 175 54.9
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 3.4e-44 182.6 180 55.0
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 3.4e-44 182.6 162 58.0
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.9e-43 179.5 178 57.3
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 2.7e-41 172.9 180 52.8
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 3.4e-36 156.0 116 64.7
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 4.2e-34 149.1 195 49.7
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 5.5e-34 148.7 167 52.1
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.2e-33 147.5 115 67.0
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 2.1e-33 146.7 130 60.0
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 7.9e-33 144.8 217 43.8
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 8.7e-32 141.4 161 50.9
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 9.6e-31 137.9 89 73.0
SGA_v2.0_scaffold440G51651 Striga asiatica HOM05D007006 ORTHO05D008925 1.8e-29 133.7 224 44.2
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 5.8e-28 128.6 168 44.0
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 4.9e-27 125.6 181 45.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 8.4e-27 124.8 182 42.9
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 3.5e-25 119.4 104 59.6
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 7.9e-25 118.2 102 61.8
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 4.8e-22 109.0 79 65.8
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 6.3e-22 108.6 166 37.3
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 8.2e-22 108.2 168 42.9
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 3.9e-16 89.4 79 60.8
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-15 86.7 94 50.0
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 2.5e-10 70.1 41 82.9


User provided reference genes

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