Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 1.3e-208 729.6 380 100.0
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 1.3e-22 111.7 373 30.6
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 3.6e-22 110.2 204 41.7
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 1.3e-16 91.7 286 31.5
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 8.7e-16 89.0 183 39.9
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.8e-13 81.3 143 43.4
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 3.1e-13 80.5 329 30.4
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 5.3e-13 79.7 255 33.3
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 1.5e-12 78.2 255 32.9
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 4.9e-11 73.2 137 38.7
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 8.4e-11 72.4 240 30.4
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 8.4e-11 72.4 256 29.7
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 2.5e-10 70.9 170 31.2
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 9.3e-10 68.9 407 28.7
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 2.7e-09 67.4 320 27.5
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 2.7e-09 67.4 160 35.0
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 3.5e-09 67.0 244 29.1
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.8e-08 64.7 279 31.2
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 2.3e-08 64.3 210 31.4
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 3.9e-08 63.5 370 27.8
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 8.7e-08 62.4 153 32.7
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 8.7e-08 62.4 213 32.4
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 8.7e-08 62.4 228 30.7
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 1.5e-07 61.6 354 24.3
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.9e-07 61.2 392 29.3
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.9e-07 61.2 277 27.8
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.9e-07 61.2 277 27.8
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 2.5e-07 60.8 210 26.2
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 5.7e-07 59.7 220 32.7
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 7.4e-07 59.3 249 30.1
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.8e-06 56.6 277 27.8
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 4.8e-06 56.6 242 29.8
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 6.2e-06 56.2 277 27.1
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 8.2e-06 55.8 365 25.2


User provided reference genes

Program Settings