Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold308G48118 Striga asiatica HOM05D012404 ORTHO05D002765 1.6e-70 269.2 130 100.0
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 2.4e-34 149.1 89 83.1
SGA_v2.0_scaffold103G30032 Striga asiatica HOM05D000017 ORTHO05D000013 8.1e-30 134.0 74 85.1
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.4e-10 70.1 85 37.6
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-09 65.5 89 29.2
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 1.0e-08 63.9 85 31.8
SGA_v2.0_scaffold16G07749 Striga asiatica HOM05D015252 ORTHO05D002765 1.3e-08 63.5 85 36.5
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-08 62.4 81 35.8
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 3.0e-08 62.4 83 33.7
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-08 62.4 83 32.5
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 3.0e-08 62.4 85 31.8
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 3.9e-08 62.0 85 31.8
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 5.1e-08 61.6 83 33.7
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 5.1e-08 61.6 83 32.5
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 8.7e-08 60.8 83 33.7
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 8.7e-08 60.8 83 33.7
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 8.7e-08 60.8 83 33.7
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 1.1e-07 60.5 83 33.7
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 1.1e-07 60.5 82 30.5
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 1.1e-07 60.5 82 30.5
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 1.9e-07 59.7 83 33.7
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 2.5e-07 59.3 83 32.5
Oeu044344.1 Olea europaea HOM05D012404 ORTHO05D002765 4.3e-07 58.5 83 33.7
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 5.6e-07 58.2 83 32.5
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 5.6e-07 58.2 80 30.0
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 7.3e-07 57.8 121 25.6
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-07 57.4 103 27.2
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 1.3e-06 57.0 83 32.5
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 56.2 91 30.8
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 56.2 91 30.8
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 56.2 91 30.8
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 56.2 91 30.8
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 2.1e-06 56.2 91 30.8
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-06 55.8 91 30.8
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 6.2e-06 54.7 82 29.3


User provided reference genes

Program Settings