Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 3.0e-69 265.0 127 100.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 2.2e-64 248.8 127 92.9
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 6.0e-62 240.7 127 89.0
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 8.6e-61 236.9 127 85.8
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.9e-60 235.7 127 85.0
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 2.5e-60 235.3 127 85.8
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 2.5e-60 235.3 127 86.6
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 85.0
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 87.4
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 5.6e-60 234.2 126 85.7
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.2e-59 233.0 127 84.3
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 84.3
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.1e-59 232.3 125 84.8
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.1e-59 232.3 123 87.0
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.8e-59 231.9 125 84.0
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 2.8e-59 231.9 127 85.0
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 4.7e-59 231.1 127 83.5
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.7e-59 231.1 127 84.3
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 4.7e-59 231.1 127 82.7
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 6.2e-59 230.7 127 82.7
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 6.2e-59 230.7 126 83.3
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 6.2e-59 230.7 123 85.4
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 6.2e-59 230.7 127 83.5
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 83.2
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 1.1e-58 229.9 127 82.7
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 1.1e-58 229.9 127 82.7
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 1.4e-58 229.6 125 84.0
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 1.4e-58 229.6 123 87.8
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 1.4e-58 229.6 126 83.3
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 1.4e-58 229.6 127 84.3
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.8e-58 229.2 125 81.6
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.8e-58 229.2 127 81.9
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 83.7
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.8e-58 229.2 125 81.6
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 2.4e-58 228.8 127 84.3
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 2.4e-58 228.8 127 81.9
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 2.4e-58 228.8 127 81.9
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 3.1e-58 228.4 125 82.4
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 4.0e-58 228.0 126 82.5
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 4.0e-58 228.0 127 81.9
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.2e-58 227.6 125 82.4
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 8.9e-58 226.9 127 82.7
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 8.9e-58 226.9 127 81.1
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 1.2e-57 226.5 125 82.4
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 83.2
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.0e-57 225.7 127 81.9
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 2.0e-57 225.7 128 82.8
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 2.0e-57 225.7 125 83.2
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 2.0e-57 225.7 127 82.7
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 2.0e-57 225.7 125 84.0
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 80.8
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 3.4e-57 224.9 123 81.3
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 4.4e-57 224.6 126 81.7
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.4e-57 224.6 127 81.1
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 5.8e-57 224.2 125 80.8
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 7.6e-57 223.8 127 81.9
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 127 81.9
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 127 81.9
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 127 81.9
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 127 81.9
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 82.1
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 9.9e-57 223.4 127 80.3
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 9.9e-57 223.4 127 81.1
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 81.6
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 81.6
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 81.0
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 81.0
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 81.0
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 80.2
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 81.1
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 81.0
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 1.7e-56 222.6 125 80.8
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.7e-56 222.6 125 81.6
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 81.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 2.2e-56 222.2 121 84.3
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 2.2e-56 222.2 121 84.3
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 4.9e-56 221.1 122 80.3
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 6.4e-56 220.7 125 80.0
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 6.4e-56 220.7 127 79.5
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 81.3
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 82.1
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 8.4e-56 220.3 126 79.4
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 81.3
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 8.4e-56 220.3 125 81.6
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 8.4e-56 220.3 127 81.9
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 8.4e-56 220.3 127 78.7
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.4e-55 219.5 127 79.5
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 1.4e-55 219.5 122 80.3
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 1.9e-55 219.2 123 81.3
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 77.8
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 3.2e-55 218.4 126 77.8
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 4.1e-55 218.0 125 80.8
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 77.2
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 9.2e-55 216.9 121 82.6
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 78.0
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 78.9
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 9.2e-55 216.9 121 79.3
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 79.7
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 1.2e-54 216.5 124 79.0
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.6e-54 216.1 123 78.9
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 2.7e-54 215.3 123 78.9
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 4.6e-54 214.5 123 78.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 4.6e-54 214.5 123 81.3
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 4.6e-54 214.5 123 79.7
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.6e-54 214.5 115 83.5
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 6.0e-54 214.2 123 79.7
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.0e-53 213.4 123 79.7
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 1.0e-53 213.4 123 78.0
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.0e-53 213.4 126 77.8
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.0e-53 213.4 126 76.2
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 1.3e-53 213.0 123 78.9
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 3.0e-53 211.8 118 78.8
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 3.0e-53 211.8 121 77.7
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 3.9e-53 211.5 123 78.0
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 5.1e-53 211.1 128 78.1
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 5.1e-53 211.1 127 75.6
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.5e-52 209.5 115 79.1
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.9e-52 209.1 126 76.2
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 2.5e-52 208.8 123 77.2
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.2e-51 206.5 123 76.4
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 6.9e-50 200.7 110 82.7
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 9.0e-50 200.3 118 78.0
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.2e-49 199.9 125 75.2
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 1.2e-49 199.9 112 80.4
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.2e-49 199.9 125 73.6
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.6e-49 198.7 112 79.5
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.6e-49 198.7 107 83.2
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 5.8e-49 197.6 112 79.5
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 7.6e-49 197.2 107 84.1
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 8.4e-48 193.7 115 77.4
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.9e-47 192.6 134 73.9
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.4e-47 192.2 111 81.1
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 7.8e-46 187.2 126 69.0
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 7.8e-46 187.2 103 82.5
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.3e-45 186.4 101 85.1
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 1.3e-45 186.4 124 66.1
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 3.0e-45 185.3 124 70.2
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.3e-44 181.8 100 82.0
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.3e-43 179.9 100 80.0
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.3e-43 179.9 99 85.9
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 2.2e-40 169.1 120 64.2
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 3.8e-40 168.3 102 78.4
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.4e-39 164.5 98 78.6
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 9.3e-39 163.7 88 84.1
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.1e-38 162.5 124 58.9
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.5e-38 161.8 127 57.5
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 5.1e-37 157.9 102 71.6
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.1e-36 156.8 131 61.1
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.4e-33 145.2 69 94.2
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.4e-31 139.8 119 53.8
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.9e-31 139.4 126 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 6.0e-30 134.4 120 52.5
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.8e-27 125.6 114 58.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.1e-26 123.6 107 59.8
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.4e-26 123.2 57 93.0
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 9.3e-23 110.5 121 43.8
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.1e-22 109.4 129 46.5
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.3e-21 106.7 113 46.9
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 3.3e-20 102.1 62 74.2
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 4.3e-20 101.7 79 54.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.8e-16 88.6 47 87.2
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 3.3e-12 75.5 35 97.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.0e-09 66.2 32 87.5
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 2.2e-08 62.8 35 77.1
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 3.8e-08 62.0 33 78.8


User provided reference genes

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