Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 2.6e-160 568.5 268 100.0
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 2.8e-69 266.2 132 88.6
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 3.7e-69 265.8 128 90.6
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 3.4e-67 259.2 132 85.6
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 3.4e-67 259.2 124 88.7
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 4.9e-66 255.4 132 84.8
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 4.2e-65 252.3 132 84.8
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 7.1e-65 251.5 132 84.1
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.2e-64 250.8 132 84.8
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.6e-64 250.4 132 84.8
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 4.6e-64 248.8 132 81.1
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 1.0e-63 247.7 132 83.3
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 1.3e-63 247.3 128 82.0
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 3.0e-63 246.1 132 81.1
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 6.7e-63 245.0 132 80.3
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 8.7e-63 244.6 133 79.7
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 1.9e-62 243.4 129 80.6
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 3.3e-62 242.7 128 79.7
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 7.4e-62 241.5 126 79.4
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 7.4e-62 241.5 132 79.5
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.3e-61 240.7 125 79.2
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 1.3e-61 240.7 124 82.3
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 1.6e-61 240.4 132 78.8
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.6e-61 240.4 133 78.9
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 2.2e-61 240.0 131 77.9
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 2.8e-61 239.6 125 78.4
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 2.8e-61 239.6 123 82.1
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 2.8e-61 239.6 124 83.1
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 4.8e-61 238.8 125 78.4
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 4.8e-61 238.8 122 82.8
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 4.8e-61 238.8 132 77.3
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 4.8e-61 238.8 125 79.2
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 6.3e-61 238.4 131 77.9
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 8.2e-61 238.0 128 77.3
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 8.2e-61 238.0 126 78.6
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.2e-61 238.0 129 77.5
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 8.2e-61 238.0 132 78.8
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 1.1e-60 237.7 122 80.3
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 1.4e-60 237.3 126 77.8
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 2.4e-60 236.5 126 77.0
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 2.4e-60 236.5 124 80.6
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 2.4e-60 236.5 124 81.5
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.4e-60 236.5 124 81.5
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 2.4e-60 236.5 131 77.9
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.1e-60 236.1 129 76.7
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 3.1e-60 236.1 124 79.8
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 3.1e-60 236.1 124 79.8
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 4.1e-60 235.7 122 80.3
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 5.3e-60 235.3 129 76.7
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 5.3e-60 235.3 126 77.8
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 5.3e-60 235.3 124 80.6
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 6.9e-60 235.0 124 80.6
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 6.9e-60 235.0 132 76.5
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 1.2e-59 234.2 129 77.5
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 1.2e-59 234.2 126 79.4
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 1.5e-59 233.8 125 77.6
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 2.0e-59 233.4 126 76.2
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 2.6e-59 233.0 126 76.2
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 2.6e-59 233.0 124 79.0
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 4.5e-59 232.3 126 76.2
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 4.5e-59 232.3 131 74.8
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 4.5e-59 232.3 128 76.6
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 7.7e-59 231.5 124 79.8
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 1.0e-58 231.1 126 75.4
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 1.0e-58 231.1 126 75.4
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 1.0e-58 231.1 134 75.4
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 1.3e-58 230.7 122 79.5
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 1.7e-58 230.3 126 74.6
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 2.2e-58 229.9 123 79.7
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 2.2e-58 229.9 129 76.7
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 2.2e-58 229.9 120 81.7
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 2.2e-58 229.9 129 77.5
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 3.8e-58 229.2 122 80.3
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 5.0e-58 228.8 124 78.2
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 8.5e-58 228.0 122 77.9
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 8.5e-58 228.0 129 77.5
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 1.4e-57 227.3 129 73.6
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 1.4e-57 227.3 127 74.8
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 1.9e-57 226.9 131 75.6
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 1.9e-57 226.9 129 73.6
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 2.5e-57 226.5 129 76.0
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 2.5e-57 226.5 129 73.6
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 3.2e-57 226.1 125 75.2
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.2e-57 226.1 122 77.0
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 3.2e-57 226.1 129 72.9
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 4.2e-57 225.7 119 80.7
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 5.5e-57 225.3 129 72.9
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 5.5e-57 225.3 129 74.4
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 7.2e-57 224.9 129 72.9
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 7.2e-57 224.9 124 75.8
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 2.1e-56 223.4 130 70.8
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 3.6e-56 222.6 130 72.3
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 6.1e-56 221.9 129 72.9
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 7.9e-56 221.5 129 74.4
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 1.8e-55 220.3 142 69.0
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.9e-55 219.2 129 72.9
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 3.9e-55 219.2 120 75.0
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 5.1e-55 218.8 128 71.9
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 6.7e-55 218.4 124 75.8
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 8.8e-55 218.0 122 76.2
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.1e-54 217.6 152 62.5
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.1e-54 217.6 124 72.6
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 4.3e-54 215.7 114 78.1
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 4.3e-54 215.7 131 71.0
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.8e-52 210.3 122 70.5
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 6.9e-52 208.4 129 69.0
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 1.2e-51 207.6 117 75.2
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.0e-51 206.8 133 68.4
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.0e-50 204.5 120 72.5
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.2e-50 203.4 114 74.6
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 3.8e-50 202.6 156 61.5
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 6.5e-50 201.8 191 51.8
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.4e-49 200.7 110 78.2
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.5e-49 199.9 132 68.2
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 3.3e-46 189.5 124 67.7
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 5.3e-44 182.2 132 63.6
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 7.0e-44 181.8 130 66.9
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 2.6e-43 179.9 274 37.6
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 6.5e-42 175.3 122 62.3
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 1.2e-40 171.0 123 58.5
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 4.8e-37 159.1 88 73.9
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.1e-36 157.9 128 54.7
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.2e-35 154.5 89 71.9
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.6e-35 153.3 88 73.9
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 5.9e-35 152.1 98 66.3
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 2.9e-34 149.8 87 72.4
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 1.9e-33 147.1 88 67.0
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 4.2e-33 146.0 95 66.3
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 8.0e-32 141.7 116 52.6
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 2.6e-30 136.7 86 69.8
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 1.1e-25 121.3 69 75.4
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 7.2e-25 118.6 124 46.8
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.4e-12 75.9 68 54.4
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 1.6e-11 74.3 40 70.0
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.1e-09 68.2 58 51.7
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 3.3e-09 66.6 41 61.0
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.2e-08 64.7 32 84.4


User provided reference genes

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