Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 1.6e-184 649.4 357 100.0
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 3.0e-143 512.3 379 75.7
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 8.2e-133 477.6 322 80.7
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 2.4e-132 476.1 379 73.4
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 1.3e-127 460.3 361 72.0
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.1e-124 450.7 365 69.6
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 2.6e-123 446.0 318 75.5
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 2.2e-122 443.0 325 73.5
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 2.2e-122 443.0 376 66.2
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 5.5e-121 438.3 377 66.0
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 6.1e-120 434.9 376 64.9
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 1.8e-119 433.3 365 66.3
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 5.1e-119 431.8 318 73.3
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 7.4e-118 427.9 360 70.6
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 1.3e-117 427.2 372 68.3
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 8.2e-117 424.5 374 66.3
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 1.8e-116 423.3 323 72.4
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 4.1e-116 422.2 364 65.7
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 4.1e-116 422.2 364 65.7
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 5.3e-116 421.8 364 65.7
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 1.5e-115 420.2 365 68.8
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 2.6e-115 419.5 317 71.0
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 3.4e-115 419.1 318 72.0
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 1.0e-114 417.5 317 70.0
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 1.7e-114 416.8 363 68.3
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 2.2e-114 416.4 317 71.0
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 2.9e-114 416.0 324 71.9
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 1.9e-113 413.3 313 71.9
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 3.2e-113 412.5 317 69.7
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 3.2e-113 412.5 364 66.8
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 9.4e-113 411.0 359 66.3
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 2.1e-112 409.8 318 73.3
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 2.7e-112 409.5 360 64.4
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 2.7e-112 409.5 360 66.9
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 3.6e-112 409.1 318 70.1
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 3.6e-112 409.1 371 60.9
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 6.1e-112 408.3 369 66.4
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 7.9e-112 407.9 323 70.3
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 7.9e-112 407.9 366 63.9
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 7.9e-112 407.9 364 67.0
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 1.0e-111 407.5 324 71.9
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 1.8e-111 406.8 373 66.2
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 2.3e-111 406.4 311 74.0
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.9e-111 405.6 365 66.0
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 3.9e-111 405.6 326 71.2
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 5.2e-111 405.2 311 70.7
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 5.2e-111 405.2 371 60.1
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 6.7e-111 404.8 360 66.9
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.4e-110 402.1 322 69.6
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 7.4e-110 401.4 315 70.5
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 1.3e-109 400.6 313 71.9
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 3.7e-109 399.1 371 65.2
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 2.4e-108 396.4 324 67.9
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 2.4e-108 396.4 317 67.5
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.1e-108 396.0 368 65.2
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 3.1e-108 396.0 364 61.3
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 2.0e-107 393.3 345 67.8
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.6e-107 392.9 312 68.9
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 2.6e-107 392.9 397 57.9
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 7.7e-107 391.3 318 70.8
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 1.0e-106 391.0 314 72.0
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 1.3e-106 390.6 318 70.8
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.7e-106 390.2 312 68.9
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.7e-106 390.2 312 68.9
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 2.2e-106 389.8 329 66.6
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.9e-106 389.4 318 70.1
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 3.8e-106 389.0 345 64.3
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.1e-105 387.5 324 70.4
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.9e-105 386.7 339 65.2
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 4.2e-105 385.6 328 66.2
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 7.2e-105 384.8 321 70.4
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 1.2e-104 384.0 317 70.7
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 1.0e-103 380.9 318 64.5
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.4e-103 380.6 314 65.9
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 2.3e-103 379.8 317 66.2
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 8.8e-103 377.9 324 67.0
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.3e-102 375.9 312 71.2
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 7.5e-102 374.8 317 65.9
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 1.3e-101 374.0 285 74.7
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 1.7e-101 373.6 317 65.9
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.7e-101 373.6 317 65.6
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 2.2e-101 373.2 317 65.9
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 3.7e-101 372.5 318 68.6
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 4.8e-101 372.1 315 66.0
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 4.8e-101 372.1 317 67.8
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 6.3e-101 371.7 315 65.7
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 6.3e-101 371.7 318 67.3
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 8.2e-101 371.3 314 70.1
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 1.1e-100 370.9 317 67.8
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 1.4e-100 370.5 317 65.3
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 3.1e-100 369.4 317 65.0
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 1.6e-99 367.1 287 73.9
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 3.5e-99 365.9 293 71.0
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.1e-97 360.9 298 72.1
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 1.8e-95 353.6 340 62.9
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 7.5e-94 348.2 322 60.6
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 1.3e-93 347.4 318 65.1
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 4.8e-93 345.5 345 61.7
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 9.1e-92 341.3 302 63.9
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 3.5e-91 339.3 408 55.1
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 1.7e-90 337.0 349 59.3
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 1.7e-90 337.0 365 57.8
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 3.2e-89 332.8 259 71.8
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 3.2e-89 332.8 365 58.9
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 6.1e-88 328.6 240 75.4
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 2.3e-87 326.6 254 68.5
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 2.0e-86 323.6 395 52.4
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 1.3e-85 320.9 227 74.4
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 1.6e-83 313.9 261 70.5
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 2.8e-80 303.1 324 57.7
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 3.6e-80 302.8 399 49.1
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 8.3e-77 291.6 321 53.6
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 1.6e-75 287.3 290 61.0
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 4.3e-73 279.3 192 82.3
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.6e-73 278.9 397 49.1
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 2.0e-70 270.4 220 67.7
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 3.9e-66 256.1 248 60.1
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 4.4e-62 242.7 319 46.4
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 5.8e-62 242.3 255 57.6
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 1.9e-60 237.3 294 46.3
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 8.4e-53 211.8 136 83.8
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.9e-52 210.7 325 41.2
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 4.3e-49 199.5 170 71.8
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 2.1e-48 197.2 196 58.2
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 6.2e-48 195.7 171 61.4
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 4.0e-47 193.0 176 60.2
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 3.2e-44 183.3 210 51.0
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.4e-38 163.3 126 81.0
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 3.3e-33 146.7 113 74.3
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 9.6e-33 145.2 98 81.6
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.8e-31 141.0 167 51.5
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.6e-27 126.3 121 60.3
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 6.0e-27 125.9 328 32.0
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 2.1e-24 117.5 120 52.5
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 3.1e-23 113.6 224 35.3
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 9.0e-23 112.1 102 71.6
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 3.4e-22 110.2 201 41.3
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 3.2e-20 103.6 77 70.1
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 1.8e-18 97.8 50 94.0
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 2.0e-14 84.3 52 82.7
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 7.6e-14 82.4 53 79.2
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 2.5e-12 77.4 52 78.8
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 2.7e-11 73.9 51 74.5
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 2.3e-10 70.9 68 54.4
FvH4_1g08700 Fragaria vesca HOM05D000069 ORTHO05D021424 5.9e-06 56.2 44 61.4


User provided reference genes

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