Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 1.8e-90 335.9 167 100.0
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.3e-61 240.0 155 74.8
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 3.0e-61 238.8 155 73.5
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.9e-61 238.4 154 72.7
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 8.7e-61 237.3 154 73.4
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 2.5e-60 235.7 154 72.7
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.5e-60 235.7 154 71.4
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 8.1e-59 230.7 159 73.0
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 1.1e-58 230.3 151 71.5
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.1e-58 230.3 154 73.4
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.4e-58 229.9 155 69.7
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.4e-58 229.9 151 72.2
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 4.0e-58 228.4 148 71.6
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 2.0e-57 226.1 151 70.9
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 3.4e-57 225.3 157 68.8
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 5.8e-57 224.6 151 71.5
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 7.6e-57 224.2 151 71.5
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 9.9e-57 223.8 151 71.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 2.2e-56 222.6 156 68.6
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 2.2e-56 222.6 151 69.5
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 2.2e-56 222.6 156 70.5
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 6.4e-56 221.1 149 69.1
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 1.1e-55 220.3 156 70.5
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.1e-55 220.3 151 68.2
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 2.4e-55 219.2 141 72.3
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 4.2e-55 218.4 144 70.1
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 5.5e-55 218.0 162 64.8
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 5.5e-55 218.0 150 67.3
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 5.5e-55 218.0 154 65.6
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 5.5e-55 218.0 151 66.9
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 1.2e-54 216.9 149 67.8
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 2.1e-54 216.1 141 71.6
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 2.1e-54 216.1 142 72.5
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 3.5e-54 215.3 141 71.6
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 4.6e-54 214.9 151 68.2
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 6.0e-54 214.5 148 68.2
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 6.0e-54 214.5 146 68.5
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 7.9e-54 214.2 141 70.2
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 1.0e-53 213.8 148 67.6
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 1.0e-53 213.8 151 66.2
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.0e-53 213.8 168 63.1
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.0e-53 213.8 149 66.4
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 1.0e-53 213.8 141 70.9
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 2.3e-53 212.6 158 64.6
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 3.0e-53 212.2 153 66.0
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 3.9e-53 211.8 141 70.9
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 3.9e-53 211.8 155 65.8
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 3.9e-53 211.8 154 64.3
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 8.7e-53 210.7 137 75.9
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.5e-52 209.9 150 66.0
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.5e-52 209.9 147 67.3
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.9e-52 209.5 149 69.1
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 1.9e-52 209.5 147 68.0
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 2.5e-52 209.1 142 71.1
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 2.5e-52 209.1 152 66.4
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 2.5e-52 209.1 152 66.4
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 5.6e-52 208.0 144 69.4
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 7.4e-52 207.6 147 66.7
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 7.4e-52 207.6 144 70.8
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 1.3e-51 206.8 148 64.2
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 1.3e-51 206.8 144 69.4
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.3e-51 206.8 148 66.9
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.8e-51 205.7 155 63.9
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 3.7e-51 205.3 155 63.2
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 3.7e-51 205.3 151 66.2
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 4.8e-51 204.9 143 66.4
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 4.8e-51 204.9 153 65.4
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.4e-50 202.6 150 63.3
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 2.4e-50 202.6 152 63.8
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 3.1e-50 202.2 152 63.8
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 3.1e-50 202.2 152 63.8
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 4.0e-50 201.8 149 65.8
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 4.0e-50 201.8 149 65.1
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 5.3e-50 201.4 156 64.7
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 5.3e-50 201.4 142 69.0
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 5.3e-50 201.4 144 68.1
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.2e-49 200.3 145 66.9
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 2.0e-49 199.5 139 66.9
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 1.0e-48 197.2 144 66.7
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 1.0e-48 197.2 144 66.0
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 1.3e-48 196.8 152 63.8
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 2.2e-48 196.1 139 66.2
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 1.9e-47 193.0 164 57.9
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 2.5e-47 192.6 151 62.9
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 3.2e-47 192.2 151 62.9
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 2.1e-46 189.5 145 63.4
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.7e-46 189.1 151 61.6
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 6.0e-46 188.0 151 62.3
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 1.1e-44 183.7 130 65.4
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 1.5e-44 183.3 149 61.1
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 1.1e-42 177.2 168 54.8
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 1.8e-42 176.4 149 59.7
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 5.3e-42 174.9 152 55.9
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.2e-41 173.7 132 65.2
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 1.2e-41 173.7 149 59.1
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 1.0e-40 170.6 131 64.1
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.6e-38 162.2 165 48.5
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 1.5e-36 156.8 96 77.1
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 1.3e-35 153.7 152 54.6
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 4.8e-35 151.8 162 49.4
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 7.7e-33 144.4 93 75.3
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 2.9e-32 142.5 90 75.6
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 4.7e-30 135.2 101 64.4
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 6.1e-30 134.8 143 51.0
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 2.3e-29 132.9 99 64.6
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.7e-27 126.7 78 74.4
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.4e-20 102.1 75 62.7
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 7.4e-20 101.3 94 54.3
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 7.4e-20 101.3 94 54.3
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 1.7e-19 100.1 110 50.9
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 7.0e-18 94.7 80 57.5
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 2.6e-17 92.8 65 67.7
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 5.0e-16 88.6 97 46.4
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 1.6e-14 83.6 67 53.7
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 2.8e-11 72.8 78 50.0
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 3.7e-11 72.4 53 62.3
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 5.3e-10 68.6 69 44.9
arahy.Tifrunner.gnm1.ann1.KDYD97 Arachis hypogaea HOM05D004023 ORTHO05D004681 3.6e-06 55.8 64 43.8
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 6.1e-06 55.1 74 35.1


User provided reference genes

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