Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 0.0e+00 1094.7 545 100.0
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 9.7e-194 680.6 525 69.5
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 3.5e-183 645.6 491 70.9
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 5.5e-181 638.3 518 67.0
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 8.8e-179 630.9 474 69.8
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 1.7e-177 626.7 521 65.3
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 1.4e-176 623.6 476 68.3
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 9.1e-176 620.9 439 72.7
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 2.0e-175 619.8 456 70.8
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 3.5e-175 619.0 456 70.8
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 1.3e-174 617.1 456 70.4
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 2.9e-174 615.9 498 65.7
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 1.1e-173 614.0 480 66.0
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 3.2e-173 612.5 475 67.8
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 7.2e-173 611.3 486 65.4
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 9.4e-173 610.9 541 62.3
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.2e-172 610.5 452 69.7
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 1.2e-172 610.5 439 72.0
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.6e-172 610.1 449 70.4
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 2.1e-172 609.8 522 62.8
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 6.1e-172 608.2 449 69.9
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 1.0e-171 607.4 520 64.4
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 1.4e-171 607.1 526 64.4
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 1.8e-171 606.7 482 66.2
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 5.2e-171 605.1 489 65.2
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 1.5e-170 603.6 482 66.8
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 2.0e-170 603.2 519 62.8
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 3.4e-170 602.4 469 67.8
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 9.8e-170 600.9 457 70.0
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 2.8e-169 599.4 524 62.4
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 3.7e-169 599.0 446 69.1
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 6.3e-169 598.2 491 66.0
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 6.3e-169 598.2 482 66.4
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 1.1e-168 597.4 447 69.6
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 4.1e-168 595.5 449 69.3
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 5.4e-168 595.1 453 69.8
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 9.1e-168 594.3 444 69.8
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 9.1e-168 594.3 444 69.8
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 3.5e-167 592.4 448 69.0
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 1.0e-166 590.9 448 69.2
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 2.9e-166 589.3 444 69.6
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 5.0e-166 588.6 496 64.1
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 1.9e-165 586.6 482 64.9
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 5.5e-165 585.1 487 64.9
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 5.2e-163 578.6 449 66.6
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 2.6e-162 576.2 481 63.6
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 7.5e-162 574.7 511 62.6
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 9.8e-162 574.3 474 64.3
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 6.3e-161 571.6 469 64.4
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 6.3e-161 571.6 498 62.0
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 1.1e-160 570.9 485 62.9
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 1.8e-160 570.1 477 63.7
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 1.8e-160 570.1 455 67.0
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 4.1e-160 568.9 443 68.8
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 1.6e-159 567.0 427 67.9
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 2.0e-159 566.6 462 65.4
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 3.5e-159 565.8 449 66.1
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 5.9e-159 565.1 514 60.1
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 2.3e-158 563.1 493 62.1
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 5.0e-158 562.0 438 66.7
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 2.5e-157 559.7 500 61.0
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 9.5e-157 557.8 584 55.5
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 2.8e-156 556.2 433 68.4
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 3.6e-156 555.8 472 62.9
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 3.6e-156 555.8 445 66.1
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 9.2e-152 541.2 442 65.6
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 7.8e-151 538.1 413 68.5
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 4.3e-149 532.3 455 62.6
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 4.7e-148 528.9 472 61.7
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 2.9e-145 519.6 477 60.6
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 3.7e-145 519.2 472 61.0
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 3.7e-145 519.2 482 60.0
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 1.1e-144 517.7 466 61.6
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 7.8e-143 511.5 399 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 6.8e-139 498.4 454 59.5
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 8.9e-139 498.0 520 54.2
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 2.4e-136 490.0 470 57.9
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 2.7e-135 486.5 438 60.5
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 2.8e-132 476.5 473 58.1
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 8.1e-132 474.9 449 59.7
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 3.1e-131 473.0 464 56.5
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.6e-130 469.9 410 62.4
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 2.2e-129 466.8 451 58.1
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.9e-129 466.5 473 56.2
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 2.4e-128 463.4 438 55.5
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 7.8e-127 458.4 475 53.9
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.3e-126 457.6 443 57.6
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 2.5e-125 453.4 344 69.8
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.5e-122 444.1 488 53.3
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 2.8e-116 423.3 431 57.5
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 4.0e-115 419.5 406 58.4
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 1.8e-107 394.0 456 47.8
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 1.6e-103 380.9 326 64.4
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 2.3e-102 377.1 299 66.2
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 2.8e-100 370.2 447 48.3
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 1.6e-95 354.4 516 42.8
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 2.5e-93 347.1 308 60.7
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 1.7e-89 334.3 274 68.6
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.1e-83 315.1 285 64.6
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.5e-82 311.2 278 64.4
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 5.9e-82 309.3 212 70.8
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 9.1e-75 285.4 237 68.4
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 4.5e-74 283.1 193 72.0
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 7.2e-72 275.8 194 70.1
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.0e-70 271.9 575 34.6
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 3.5e-66 256.9 214 65.0
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 9.4e-64 248.8 176 73.9
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 3.6e-63 246.9 188 70.7
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 1.4e-62 245.0 177 72.3
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 2.3e-62 244.2 193 64.2
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 3.7e-60 236.9 147 79.6
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 6.3e-60 236.1 258 53.9
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 1.2e-55 221.9 377 40.8
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 3.0e-54 217.2 160 70.6
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 5.7e-53 213.0 238 58.0
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 5.7e-53 213.0 291 48.5
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 5.7e-53 213.0 291 48.5
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 5.7e-53 213.0 291 48.5
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 3.0e-46 190.7 170 54.1
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 3.9e-41 173.7 165 63.0
CSS0031450 Camellia sinensis var. sinensis HOM05D005057 ORTHO05D006570 7.3e-40 169.5 120 66.7
Psat1g199040 Pisum sativum HOM05D005057 ORTHO05D006570 7.3e-40 169.5 137 62.0
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 4.7e-39 166.8 185 54.6
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 6.1e-39 166.4 119 72.3
unitig_22.g6754 Utricularia gibba HOM05D005057 ORTHO05D006570 7.0e-35 152.9 129 59.7
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 2.3e-33 147.9 167 52.1
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 1.4e-27 128.6 89 74.2
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 5.4e-27 126.7 89 73.0
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 5.1e-25 120.2 147 50.3
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 6.6e-25 119.8 84 67.9
RcHm_v2.0_Chr5g0010591 Rosa chinensis HOM05D005057 ORTHO05D006570 8.9e-22 109.4 82 67.1
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 4.1e-19 100.5 96 57.3
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 8.6e-17 92.8 168 35.1
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 3.3e-16 90.9 72 65.3
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 1.8e-14 85.1 216 32.4
Medtr2g015780 Medicago truncatula HOM05D005057 ORTHO05D006570 1.5e-13 82.0 59 69.5
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 2.3e-09 68.2 83 45.8


User provided reference genes

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