Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 4.7e-255 884.0 439 100.0
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 5.3e-182 641.3 440 73.9
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 3.8e-180 635.2 439 73.3
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 5.6e-176 621.3 444 71.2
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 7.1e-171 604.4 440 70.5
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 2.7e-170 602.4 416 72.8
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.6e-170 601.7 407 74.2
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 7.9e-170 600.9 402 73.4
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 2.3e-169 599.4 415 72.5
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 6.7e-169 597.8 424 71.9
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.3e-168 595.1 425 69.9
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 6.2e-167 591.3 435 68.3
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 8.1e-167 590.9 448 67.0
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 3.1e-166 589.0 436 68.1
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 6.9e-166 587.8 422 71.3
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 9.0e-166 587.4 404 72.3
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 2.0e-165 586.3 426 69.0
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.7e-164 583.2 448 67.2
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.9e-164 582.4 450 67.1
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 2.9e-164 582.4 445 67.0
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 1.4e-163 580.1 399 71.7
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 5.5e-163 578.2 396 73.5
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 5.5e-163 578.2 425 68.9
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 9.3e-163 577.4 428 68.0
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 1.6e-162 576.6 393 72.0
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.1e-162 576.2 414 69.6
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 2.7e-162 575.9 374 75.9
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 2.7e-162 575.9 448 66.5
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 3.5e-162 575.5 433 68.1
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 3.5e-162 575.5 393 72.3
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 3.5e-162 575.5 440 67.0
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 6.0e-162 574.7 435 67.6
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 6.0e-162 574.7 448 66.5
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 7.9e-162 574.3 396 73.2
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.0e-161 573.9 448 66.5
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.8e-161 573.2 453 67.5
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 3.9e-161 572.0 400 69.5
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 6.7e-161 571.2 396 70.7
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 8.7e-161 570.9 423 68.3
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 1.5e-160 570.1 401 71.6
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 2.5e-160 569.3 450 64.7
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 2.5e-160 569.3 432 67.4
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 5.6e-160 568.2 428 67.3
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.6e-160 568.2 386 72.8
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 5.6e-160 568.2 403 69.5
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 1.6e-159 566.6 396 69.9
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 2.1e-159 566.2 386 72.5
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 8.2e-159 564.3 427 68.1
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 1.1e-158 563.9 435 66.2
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 1.4e-158 563.5 426 68.3
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 1.8e-158 563.1 381 73.8
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 2.4e-158 562.8 428 66.4
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 3.1e-158 562.4 386 72.0
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 4.0e-158 562.0 378 73.5
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 9.0e-158 560.8 396 69.7
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 3.4e-157 558.9 396 71.0
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 5.8e-157 558.1 434 66.6
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 1.3e-156 557.0 452 66.6
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 3.8e-156 555.4 430 64.9
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 1.4e-155 553.5 393 70.5
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 2.5e-155 552.7 409 68.5
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 3.2e-155 552.4 422 67.3
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 7.1e-155 551.2 402 68.7
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 1.6e-154 550.1 408 67.4
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 2.7e-154 549.3 410 67.3
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 6.1e-154 548.1 429 65.5
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 6.1e-154 548.1 409 68.2
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 7.9e-154 547.7 450 63.8
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 1.0e-153 547.4 433 64.0
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 1.3e-153 547.0 374 71.4
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 1.8e-153 546.6 396 68.2
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 3.0e-153 545.8 426 64.6
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 8.7e-153 544.3 425 64.7
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 1.9e-152 543.1 402 67.4
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 7.4e-152 541.2 393 69.7
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 7.4e-152 541.2 463 61.8
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 2.8e-151 539.3 428 64.5
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 4.8e-151 538.5 432 65.0
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.4e-150 537.0 403 66.0
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 2.4e-150 536.2 432 63.9
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 3.1e-150 535.8 397 67.5
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 5.3e-150 535.0 438 62.6
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 5.3e-150 535.0 446 65.2
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 9.0e-150 534.3 438 62.8
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.7e-148 530.0 433 62.1
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 8.5e-148 527.7 437 62.7
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 8.5e-148 527.7 437 62.7
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 8.5e-148 527.7 437 62.7
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.1e-147 527.3 374 70.1
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 4.2e-147 525.4 433 61.9
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 4.2e-147 525.4 433 61.9
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 1.2e-146 523.9 390 67.7
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 4.6e-146 521.9 422 63.3
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.0e-145 519.2 422 62.8
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 4.8e-143 511.9 344 73.8
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 7.7e-141 504.6 448 59.6
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.8e-137 493.4 397 64.2
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 1.7e-135 486.9 405 60.2
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 1.1e-134 484.2 315 74.6
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 2.6e-133 479.6 434 56.7
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 7.7e-133 478.0 380 61.8
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 6.5e-132 474.9 458 53.7
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.1e-122 443.4 349 65.3
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 9.2e-102 374.8 363 56.2
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 1.1e-99 367.9 401 49.9
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 8.0e-98 361.7 254 71.7
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.6e-96 356.7 366 50.8
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 1.7e-95 354.0 403 49.4
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 1.3e-92 344.4 391 46.5
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 4.4e-88 329.3 370 50.3
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.3e-87 327.8 377 45.9
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 9.6e-75 285.0 325 46.5
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 2.1e-74 283.9 338 44.4
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.1e-73 281.6 385 44.9
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 4.5e-48 196.4 138 67.4
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 3.3e-43 180.3 251 45.8
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 9.3e-38 162.2 104 75.0
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 2.5e-35 154.1 97 72.2
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.5e-27 127.5 82 76.8
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.3e-26 125.2 82 75.6
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.1e-25 122.1 265 34.0
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.5e-24 118.2 284 32.7
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 1.3e-23 115.2 89 65.2
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 1.3e-23 115.2 312 32.4
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 5.0e-23 113.2 87 66.7
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 3.6e-21 107.1 82 67.1
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 1.5e-19 101.7 105 55.2
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.7e-18 98.2 80 61.2
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 5.5e-14 83.2 122 41.8
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.7e-13 80.1 71 54.9
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.7e-12 76.3 87 52.9
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 1.7e-07 61.6 53 52.8


User provided reference genes

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