Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold306G48019 Striga asiatica HOM05D000018 ORTHO05D008577 6.3e-54 213.8 103 100.0
Nitab4.5_0012391g0010 Nicotiana tabacum HOM05D000018 ORTHO05D008577 2.8e-09 65.5 40 70.0
Peaxi162Scf00888g00113 Petunia axillaris HOM05D000018 ORTHO05D008577 1.4e-08 63.2 33 75.8
CAN.G465.7 Capsicum annuum HOM05D000018 ORTHO05D008577 2.4e-08 62.4 33 78.8
Nitab4.5_0004778g0010 Nicotiana tabacum HOM05D000018 ORTHO05D008577 4.0e-08 61.6 33 78.8
Lj1C1149T12 Lonicera japonica HOM05D000018 ORTHO05D008577 6.9e-08 60.8 33 75.8
vmacro03178 Vaccinium macrocarpon HOM05D000018 ORTHO05D008577 6.9e-08 60.8 31 80.6
PGR031G0591 Punica granatum HOM05D000018 ORTHO05D008577 9.0e-08 60.5 31 77.4
Sopen10g001140 Solanum pennellii HOM05D000018 ORTHO05D008577 9.0e-08 60.5 33 75.8
PGSC0003DMG402011292 Solanum tuberosum HOM05D000018 ORTHO05D018885 1.2e-07 60.1 31 80.6
Eucgr.B01527 Eucalyptus grandis HOM05D000018 ORTHO05D008577 1.5e-07 59.7 31 77.4
FAN02G4377 Fragaria x ananassa HOM05D000018 ORTHO05D008577 1.5e-07 59.7 31 80.6
Cc09_g04410 Coffea canephora HOM05D000018 ORTHO05D008577 2.0e-07 59.3 33 75.8
Solyc10g005120.2 Solanum lycopersicum HOM05D000018 ORTHO05D008577 3.4e-07 58.5 33 72.7
HPP92_027381 Vanilla planifolia HOM05D000018 ORTHO05D008577 3.4e-07 58.5 31 77.4
Migut.K01063 Erythranthe guttata HOM05D000018 ORTHO05D008577 4.5e-07 58.2 32 78.1
FvH4_6g39151 Fragaria vesca HOM05D000018 ORTHO05D008577 4.5e-07 58.2 31 77.4
FAN05G1045 Fragaria x ananassa HOM05D000018 ORTHO05D008577 4.5e-07 58.2 31 77.4
RcHm_v2.0_Chr2g0152971 Rosa chinensis HOM05D000018 ORTHO05D008577 4.5e-07 58.2 31 77.4
Zm00001eb375840 Zea mays HOM05D000018 ORTHO05D008577 4.5e-07 58.2 32 78.1
CANSAT54G0470 Cannabis sativa HOM05D000018 ORTHO05D008577 5.8e-07 57.8 31 74.2
ECA246G2837 Erigeron canadensis HOM05D000018 ORTHO05D008577 5.8e-07 57.8 33 69.7
HanXRQChr17g0538911 Helianthus annuus HOM05D000018 ORTHO05D008577 5.8e-07 57.8 33 72.7
Oeu058896.1 Olea europaea HOM05D000018 ORTHO05D008577 5.8e-07 57.8 33 72.7
MSTRG.458 Avicennia marina HOM05D000018 ORTHO05D008577 7.6e-07 57.4 33 72.7
Potri.011G024100 Populus trichocarpa HOM05D000018 ORTHO05D008577 9.9e-07 57.0 31 77.4
Sabra11G0015100 Salix brachista HOM05D000018 ORTHO05D008577 9.9e-07 57.0 31 77.4
TWI32G0578 Tripterygium wilfordii HOM05D000018 ORTHO05D008577 9.9e-07 57.0 31 74.2
TAR624G0388 Trochodendron aralioides HOM05D000018 ORTHO05D008577 9.9e-07 57.0 31 74.2
TAR624G0490 Trochodendron aralioides HOM05D000018 ORTHO05D008577 9.9e-07 57.0 31 74.2
Aqoxy1G01349 Aquilegia oxysepala HOM05D000018 ORTHO05D008577 1.3e-06 56.6 31 74.2
Aqoxy1G01352 Aquilegia oxysepala HOM05D000018 ORTHO05D008577 1.3e-06 56.6 31 74.2
Medtr3g063180 Medicago truncatula HOM05D000018 ORTHO05D008577 1.7e-06 56.2 31 74.2
Os06g0162500 Oryza sativa ssp. japonica HOM05D000018 ORTHO05D008577 1.7e-06 56.2 31 77.4
Psat5g146680 Pisum sativum HOM05D000018 ORTHO05D008577 1.7e-06 56.2 31 74.2
TPR.G37381 Trifolium pratense HOM05D000018 ORTHO05D008577 1.7e-06 56.2 31 74.2
arahy.Tifrunner.gnm1.ann1.JK36JM Arachis hypogaea HOM05D000018 ORTHO05D008577 2.2e-06 55.8 31 74.2
Cc09_g04430 Coffea canephora HOM05D000018 ORTHO05D008577 2.2e-06 55.8 33 72.7
QL09p020541 Quercus lobata HOM05D000018 ORTHO05D008577 2.2e-06 55.8 30 73.3
Atru.chr8.1037 Acer truncatum HOM05D000018 ORTHO05D008577 2.9e-06 55.5 31 71.0
arahy.Tifrunner.gnm1.ann1.HP8L6T Arachis hypogaea HOM05D000018 ORTHO05D008577 2.9e-06 55.5 31 71.0
CiPaw.06G002600 Carya illinoinensis HOM05D000018 ORTHO05D008577 2.9e-06 55.5 30 73.3
FAN14G4789 Fragaria x ananassa HOM05D000018 ORTHO05D008577 2.9e-06 55.5 31 74.2
Lsat_1_v5_gn_5_139101 Lactuca sativa HOM05D000018 ORTHO05D008577 2.9e-06 55.5 31 71.0
Ca_15097_v3 Cicer arietinum L. HOM05D000018 ORTHO05D008577 3.8e-06 55.1 31 71.0
Ciclev10012063m.g Citrus clementina HOM05D000018 ORTHO05D008577 3.8e-06 55.1 29 75.9
Lj6g0027835 Lotus japonicus HOM05D000018 ORTHO05D008577 3.8e-06 55.1 31 71.0
MD09G1144700 Malus domestica HOM05D000018 ORTHO05D008577 3.8e-06 55.1 31 74.2
Duzib170G0451 Durio zibethinus HOM05D000018 ORTHO05D008577 4.9e-06 54.7 31 67.7
AL7G38720 Arabidopsis lyrata HOM05D000018 ORTHO05D008577 6.4e-06 54.3 31 67.7
AT4G16330 Arabidopsis thaliana HOM05D000018 ORTHO05D008577 6.4e-06 54.3 31 67.7
GSVIVG01015908001 Vitis vinifera HOM05D000018 ORTHO05D008577 6.4e-06 54.3 31 64.5
Thecc.07G099000 Theobroma cacao HOM05D000018 ORTHO05D008577 8.4e-06 53.9 31 67.7


User provided reference genes

Program Settings