Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 0.0e+00 1102.0 576 100.0
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 2.5e-192 676.0 594 65.8
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.0e-161 574.3 592 56.9
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 8.2e-159 564.7 585 58.5
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 1.8e-158 563.5 569 57.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 6.9e-158 561.6 529 60.5
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 2.6e-157 559.7 547 59.0
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 3.4e-157 559.3 553 60.0
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 6.5e-156 555.1 575 57.0
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.2e-155 552.4 597 55.3
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 5.5e-155 552.0 565 57.3
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 5.5e-155 552.0 565 57.3
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.1e-154 550.1 546 59.2
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 2.7e-154 549.7 611 55.0
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 6.1e-154 548.5 567 57.1
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 2.3e-153 546.6 527 59.2
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 6.7e-153 545.0 601 54.7
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 8.8e-153 544.7 533 59.3
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 8.8e-153 544.7 592 54.7
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.1e-152 544.3 595 56.0
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.5e-152 543.9 595 53.9
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 2.6e-152 543.1 595 53.8
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 3.3e-152 542.7 595 53.9
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 5.7e-152 542.0 516 60.5
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 7.4e-152 541.6 592 57.1
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 2.2e-151 540.0 567 55.9
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 2.8e-151 539.7 502 60.6
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 2.8e-151 539.7 595 54.3
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 1.1e-150 537.7 613 53.7
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 7.0e-150 535.0 528 58.5
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.5e-149 533.9 596 56.4
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 2.0e-149 533.5 515 59.0
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 3.5e-149 532.7 566 56.2
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 4.5e-149 532.3 531 58.2
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 1.7e-148 530.4 563 56.1
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 2.9e-148 529.6 485 62.5
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 8.5e-148 528.1 562 56.8
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 7.2e-147 525.0 591 54.0
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 1.2e-146 524.2 550 54.7
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 3.6e-146 522.7 559 54.9
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 3.6e-146 522.7 541 56.7
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.0e-145 521.2 587 55.4
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 2.3e-145 520.0 540 56.3
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 1.5e-144 517.3 586 53.6
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 5.7e-144 515.4 550 56.9
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 9.7e-144 514.6 533 54.8
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.3e-143 514.2 558 56.1
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.3e-143 514.2 566 54.9
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 1.7e-143 513.8 495 58.8
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 1.7e-143 513.8 533 55.0
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.7e-143 513.8 521 55.5
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 2.8e-143 513.1 541 53.2
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 3.7e-143 512.7 550 53.1
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 4.8e-143 512.3 559 54.2
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 6.3e-143 511.9 541 56.2
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 8.2e-143 511.5 579 53.0
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.1e-142 511.1 536 55.4
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.8e-142 510.4 521 54.5
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 3.1e-142 509.6 608 51.5
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 5.3e-142 508.8 503 58.1
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 7.0e-142 508.4 536 55.0
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 9.1e-142 508.1 508 59.1
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.6e-141 507.3 565 51.9
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 1.6e-141 507.3 596 52.3
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 5.9e-141 505.4 588 52.0
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 1.7e-140 503.8 522 55.2
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.2e-140 503.4 551 54.6
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 3.8e-140 502.7 568 52.5
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 5.5e-139 498.8 577 52.2
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 5.5e-139 498.8 589 50.8
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 9.4e-139 498.0 518 54.4
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 2.6e-136 490.0 500 56.0
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 3.4e-136 489.6 598 51.0
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 5.7e-136 488.8 515 54.8
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 9.1e-134 481.5 470 58.3
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 1.3e-132 477.6 565 51.0
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 6.5e-132 475.3 531 54.2
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 3.2e-131 473.0 541 53.2
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 4.2e-131 472.6 484 57.4
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.5e-128 464.2 460 58.9
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 6.6e-124 448.7 572 49.5
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 2.3e-121 440.3 494 54.5
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 1.2e-120 438.0 591 47.0
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 2.0e-120 437.2 559 48.5
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 3.7e-119 433.0 543 48.4
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 5.6e-115 419.1 481 52.2
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 1.2e-114 417.9 600 45.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 6.8e-105 385.6 542 45.6
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 7.5e-104 382.1 519 46.1
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 3.0e-100 370.2 553 43.6
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 2.8e-98 363.6 525 43.0
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 4.0e-89 333.2 375 50.7
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.5e-88 331.3 280 63.2
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 7.6e-88 328.9 280 63.9
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 1.3e-87 328.2 514 40.5
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 6.0e-69 266.2 242 61.2
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 3.9e-68 263.5 535 37.4
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 1.5e-56 224.9 272 47.1
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 1.1e-54 218.8 259 49.0
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 4.2e-54 216.9 208 61.1
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 1.1e-51 208.8 295 45.4
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.9e-51 208.0 200 62.0
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 7.9e-45 186.0 591 31.3
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.2e-42 177.9 243 46.5
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.6e-35 154.5 139 63.3
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 6.3e-34 149.8 169 47.3
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 4.1e-33 147.1 182 51.6
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 4.4e-19 100.5 110 52.7
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 9.4e-14 82.8 89 49.4
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 6.8e-12 76.6 54 75.9
Glyma.05G217051 Glycine max HOM05D007126 ORTHO05D008974 1.5e-11 75.5 88 44.3


User provided reference genes

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