Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 0.0e+00 1949.9 1278 100.0
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 0.0e+00 1288.9 1335 70.9
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 1.9e-264 916.8 1322 58.5
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 9.4e-256 887.9 1327 58.5
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.5e-253 880.6 1352 59.3
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.5e-253 880.6 1352 59.3
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 1.7e-196 691.0 1343 49.6
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 2.5e-168 597.4 1346 37.7
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.0e-164 585.5 1347 49.3
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 1.1e-160 572.0 1307 44.9
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 1.2e-157 562.0 1386 46.4
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 5.0e-156 556.6 863 45.4
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 1.6e-154 551.6 1259 48.8
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 2.7e-154 550.8 1348 35.7
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 7.4e-152 542.7 1378 48.2
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 3.5e-133 480.7 1358 37.6
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 1.6e-130 471.9 1421 44.3
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 4.4e-128 463.8 1173 50.0
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 2.8e-127 461.1 1423 44.8
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 1.6e-125 455.3 1347 44.0
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 3.5e-125 454.1 843 40.8
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 2.9e-124 451.1 1177 49.8
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 6.8e-121 439.9 830 40.4
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.4e-118 432.2 720 41.9
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 1.8e-118 431.8 1331 46.1
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.6e-117 428.7 850 39.9
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 2.7e-114 417.9 1265 45.5
Oeu058004.1 Olea europaea HOM05D003962 ORTHO05D004714 3.4e-112 411.0 978 49.6
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 7.5e-112 409.8 752 40.2
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 2.8e-111 407.9 1413 32.8
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 6.3e-111 406.8 1459 43.0
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 2.2e-103 381.7 620 42.1
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 3.4e-96 357.8 963 34.9
unitig_0.g2842 Utricularia gibba HOM05D003962 ORTHO05D004714 5.8e-96 357.1 960 47.6
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 9.2e-94 349.7 1381 44.0
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 3.3e-91 341.3 626 39.3
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 4.7e-90 337.4 1356 44.2
Nn3g19007 Nelumbo nucifera HOM05D003962 ORTHO05D004714 2.3e-89 335.1 1267 31.5
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 4.4e-88 330.9 1326 39.8
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 9.8e-88 329.7 654 37.6
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 1.3e-87 329.3 1225 32.1
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.6e-85 322.4 1396 30.5
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 4.7e-82 310.8 1176 31.3
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.4e-78 299.3 841 34.0
Thecc.03G196300 Theobroma cacao HOM05D003962 ORTHO05D004714 1.9e-78 298.9 813 32.6
PSO170G0250 Papaver somniferum HOM05D003962 ORTHO05D004714 3.9e-76 291.2 1160 30.6
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.6e-74 285.8 499 38.9
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 1.4e-73 282.7 815 32.0
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 3.1e-73 281.6 866 31.4
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 6.8e-73 280.4 814 33.9
Sabra15G0011900 Salix brachista HOM05D003962 ORTHO05D004714 1.5e-72 279.3 822 34.2
PSO063G5170 Papaver somniferum HOM05D003962 ORTHO05D004714 5.8e-72 277.3 1168 29.7
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 2.2e-71 275.4 1314 32.6
Manes.14G006600 Manihot esculenta HOM05D003962 ORTHO05D004714 3.8e-71 274.6 838 32.7
Potri.012G013800 Populus trichocarpa HOM05D003962 ORTHO05D004714 6.4e-71 273.9 814 32.1
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 2.4e-70 271.9 823 30.7
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.2e-70 271.6 839 31.7
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 1.6e-69 269.2 828 33.0
Sabra12G0018000 Salix brachista HOM05D003962 ORTHO05D004714 2.1e-69 268.9 725 32.7
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.5e-69 268.1 841 32.0
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 4.6e-69 267.7 792 32.7
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 1.9e-67 262.3 829 30.4
Gohir.A11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.3e-67 261.5 737 31.3
Duzib084G0525 Durio zibethinus HOM05D003962 ORTHO05D004714 9.6e-67 260.0 827 30.6
MD01G1219900 Malus domestica HOM05D003962 ORTHO05D004714 9.6e-67 260.0 604 33.8
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 2.8e-66 258.5 822 30.4
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 3.6e-66 258.1 755 33.4
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 4.8e-66 257.7 604 33.3
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 1.1e-65 256.5 745 31.0
unitig_88.g27642 Utricularia gibba HOM05D003962 ORTHO05D004714 1.1e-65 256.5 595 35.5
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 3.1e-65 255.0 842 30.9
Gohir.D11G014700 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.1e-65 255.0 734 30.4
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 4.0e-65 254.6 814 30.5
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 9.0e-65 253.4 747 30.8
MBI06_g08468_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 1.7e-63 249.2 812 31.3
Duzib068G0757 Durio zibethinus HOM05D003962 ORTHO05D004714 1.9e-62 245.7 819 31.1
Cpa.g.sc3.71 Carica papaya HOM05D003962 ORTHO05D004714 3.2e-62 245.0 843 30.1
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 3.2e-62 245.0 846 30.6
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 4.2e-62 244.6 782 32.4
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 4.2e-62 244.6 615 34.3
Ca_16697_v3 Cicer arietinum L. HOM05D003962 ORTHO05D004714 7.1e-62 243.8 834 30.7
PSO135G0074 Papaver somniferum HOM05D003962 ORTHO05D004714 7.1e-62 243.8 700 31.0
Glyma.04G236700 Glycine max HOM05D003962 ORTHO05D004714 1.6e-61 242.7 834 30.1
Phvul.009G053600 Phaseolus vulgaris HOM05D003962 ORTHO05D004714 1.6e-61 242.7 628 32.6
PSO384G0521 Papaver somniferum HOM05D003962 ORTHO05D004714 3.5e-61 241.5 699 30.6
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 6.0e-61 240.7 828 30.2
Duzib205G1416 Durio zibethinus HOM05D003962 ORTHO05D004714 2.3e-60 238.8 767 30.1
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 2.3e-60 238.8 819 30.2
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.9e-60 238.0 1384 28.0
FAN06G4429 Fragaria x ananassa HOM05D003962 ORTHO05D004714 5.1e-60 237.7 644 32.1
FAN06G4230 Fragaria x ananassa HOM05D003962 ORTHO05D004714 6.7e-60 237.3 644 32.1
Lalb_Chr08g0240331 Lupinus albus HOM05D003962 ORTHO05D004714 8.7e-60 236.9 826 30.0
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 1.9e-59 235.7 606 31.5
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 1.9e-59 235.7 607 31.8
FAN03G1461 Fragaria x ananassa HOM05D003962 ORTHO05D004714 5.6e-59 234.2 643 31.9
FvH4_7g31740 Fragaria vesca HOM05D003962 ORTHO05D004714 1.3e-58 233.0 768 29.9
FAN10G3613 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.3e-58 233.0 655 32.5
Glyma.06G127600 Glycine max HOM05D003962 ORTHO05D004714 3.6e-58 231.5 824 28.9
FAN10G2253 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.4e-57 228.8 843 29.1
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 3.4e-56 224.9 760 29.1
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 9.9e-56 223.4 688 30.7
FAN01G0781 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.2e-55 222.2 825 29.2
Medtr3g091280 Medicago truncatula HOM05D003962 ORTHO05D004714 2.4e-54 218.8 829 28.6
Gorai.007G015100 Gossypium raimondii HOM05D003962 ORTHO05D004714 6.0e-53 214.2 500 31.6
ATR0602G039 Amborella trichopoda HOM05D003962 ORTHO05D004714 1.8e-52 212.6 879 27.9
Psat5g078120 Pisum sativum HOM05D003962 ORTHO05D004714 2.3e-52 212.2 838 28.3
THA.LOC104800296 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 3.0e-52 211.8 627 30.6
MELO3C005882.2 Cucumis melo HOM05D003962 ORTHO05D004714 2.5e-51 208.8 599 31.6
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 3.3e-51 208.4 816 27.9
EL10Ac3g05299 Beta vulgaris HOM05D003962 ORTHO05D004714 3.3e-51 208.4 797 30.2
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 3.3e-51 208.4 816 28.4
Lalb_Chr11g0066791 Lupinus albus HOM05D003962 ORTHO05D004714 4.3e-51 208.0 831 28.3
Carub.0008s1360 Capsella rubella HOM05D003962 ORTHO05D004714 1.3e-50 206.5 825 27.3
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 3.7e-50 204.9 830 28.0
CiPaw.06G010000 Carya illinoinensis HOM05D003962 ORTHO05D004714 8.1e-50 203.8 837 29.6
Sp6g15570 Schrenkiella parvula HOM05D003962 ORTHO05D004714 1.4e-49 203.0 810 27.4
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 1.8e-49 202.6 816 28.1
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 2.4e-49 202.2 821 27.8
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 3.1e-49 201.8 815 26.9
Zm00001eb359440 Zea mays HOM05D003962 ORTHO05D004714 6.9e-49 200.7 814 26.7
DCAR_006489 Daucus carota HOM05D003962 ORTHO05D004714 3.4e-48 198.4 850 27.4
AT5G53440 Arabidopsis thaliana HOM05D003962 ORTHO05D004714 4.5e-48 198.0 601 29.6
Prupe.5G120600 Prunus persica HOM05D003962 ORTHO05D004714 5.8e-48 197.6 826 28.1
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 7.6e-48 197.2 825 28.2
AL8G28140 Arabidopsis lyrata HOM05D003962 ORTHO05D004714 1.0e-47 196.8 845 27.1
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.0e-47 196.8 809 27.4
Sc19g0000840 Simmondsia chinensis HOM05D003962 ORTHO05D004714 2.2e-47 195.7 638 31.8
Sed0017272 Sechium edule HOM05D003962 ORTHO05D004714 9.3e-46 190.3 804 28.5
Ah.07g205820 Amaranthus hybridus HOM05D003962 ORTHO05D004714 1.6e-45 189.5 614 30.3
Lsat_1_v5_gn_3_10880 Lactuca sativa HOM05D003962 ORTHO05D004714 2.7e-45 188.7 1284 32.5
Os01g0655400 Oryza sativa ssp. japonica HOM05D003962 ORTHO05D004714 3.5e-45 188.3 667 28.6
TPR.G17287 Trifolium pratense HOM05D003962 ORTHO05D004714 5.1e-44 184.5 861 26.1
AUR62019379 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.1e-43 183.3 722 27.7
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 1.5e-43 183.0 504 31.2
BolC3t14179H Brassica oleracea HOM05D003962 ORTHO05D004714 3.3e-43 181.8 748 27.9
HPP92_024026 Vanilla planifolia HOM05D003962 ORTHO05D004714 7.4e-43 180.6 719 27.4
CARHR266560 Cardamine hirsuta HOM05D003962 ORTHO05D004714 9.6e-43 180.3 598 28.3
BraA03t10810Z Brassica rapa HOM05D003962 ORTHO05D004714 1.3e-42 179.9 756 28.3
C03p17680 Brassica napus HOM05D003962 ORTHO05D004714 1.6e-42 179.5 708 28.1
BcaC01g06252 Brassica carinata HOM05D003962 ORTHO05D004714 2.1e-42 179.1 748 27.8
A03p15150 Brassica napus HOM05D003962 ORTHO05D004714 2.1e-42 179.1 783 27.5
Ah.13g070110 Amaranthus hybridus HOM05D003962 ORTHO05D004714 3.1e-41 175.3 787 27.6
Thhalv10012484m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 1.5e-40 172.9 700 26.7
Zm00001eb158050 Zea mays HOM05D003962 ORTHO05D004714 3.4e-40 171.8 597 27.3
THA.LOC104825141 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 4.2e-38 164.9 617 29.0
BcaNung06205 Brassica carinata HOM05D003962 ORTHO05D004714 5.5e-38 164.5 796 26.9
SHI02385 Sapria himalayana HOM05D003962 ORTHO05D004714 5.1e-36 157.9 499 30.3
CDE10G1062 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 7.7e-32 144.1 580 26.9
Sc25g0000880 Simmondsia chinensis HOM05D003962 ORTHO05D004714 1.1e-30 140.2 693 25.8
CDE02G1812 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 2.3e-28 132.5 826 26.5
ECA233G2741 Erigeron canadensis HOM05D003962 ORTHO05D004714 8.8e-28 130.6 692 26.3
Thhalv10026934m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 8.8e-28 130.6 376 31.6
CDE09G1087 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 2.0e-24 119.4 665 26.8
CDE10G0926 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 3.8e-23 115.2 811 23.4
SEGI_14221 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 3.1e-17 95.5 688 24.4
unitig_0.g2843 Utricularia gibba HOM05D047057 ORTHO05D004714 3.1e-17 95.5 251 35.1
vmacro11466 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.6e-16 93.2 323 34.1
unitig_88.g27643 Utricularia gibba HOM05D003962 ORTHO05D004714 1.7e-15 89.7 139 44.6
SEGI_41344 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 2.5e-14 85.9 417 23.3
TAR629G3239 Trochodendron aralioides HOM05D003962 ORTHO05D004714 4.7e-13 81.6 187 38.0
ATR1089G043 Amborella trichopoda HOM05D003962 ORTHO05D004714 6.7e-12 77.8 467 25.1
TAR375G1118 Trochodendron aralioides HOM05D003962 ORTHO05D004714 3.3e-11 75.5 311 28.0
SHI02387 Sapria himalayana HOM05D003962 ORTHO05D004714 2.2e-10 72.8 123 41.5
vmacro11360 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.2e-10 72.8 369 30.4
vmacro11359 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.4e-09 69.3 216 33.3
vmacro11465 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.4e-09 69.3 216 33.3
HanXRQChr07g0190851 Helianthus annuus HOM05D003962 ORTHO05D004714 3.1e-09 68.9 99 47.5


User provided reference genes

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