Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.7e-222 775.8 411 100.0
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 1.1e-85 321.2 337 55.8
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 2.0e-82 310.5 338 57.4
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 2.1e-71 273.9 339 53.4
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 6.9e-51 205.7 350 41.7
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.0e-50 204.1 228 53.9
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 2.0e-50 204.1 305 46.2
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.0e-49 201.8 240 51.2
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 1.7e-49 201.1 303 44.2
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 9.3e-48 195.3 224 50.0
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 6.0e-47 192.6 273 46.2
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 2.3e-46 190.7 382 40.3
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 8.7e-46 188.7 374 39.8
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.3e-44 184.9 227 49.3
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.6e-44 184.5 227 49.3
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 2.1e-44 184.1 314 41.7
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 8.2e-44 182.2 375 38.7
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.8e-43 181.0 288 45.5
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 3.1e-43 180.3 255 47.8
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 5.3e-43 179.5 340 42.1
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 1.5e-42 177.9 307 41.0
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 3.4e-42 176.8 335 38.5
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 3.4e-42 176.8 325 40.3
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 5.9e-42 176.0 322 40.4
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 5.0e-41 172.9 245 42.4
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 1.9e-40 171.0 270 42.6
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 1.2e-39 168.3 370 35.9
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 1.6e-39 167.9 314 38.9
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.5e-39 166.8 328 36.9
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 6.1e-39 166.0 315 40.6
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 2.3e-38 164.1 358 36.0
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 2.3e-38 164.1 224 46.0
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.0e-38 163.7 275 42.9
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 6.7e-38 162.5 224 46.0
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 6.7e-38 162.5 336 39.0
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.5e-37 161.4 227 46.7
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 4.3e-37 159.8 209 46.9
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 7.4e-37 159.1 301 40.9
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.8e-36 157.1 223 43.0
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.4e-35 154.8 223 41.7
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.8e-35 154.5 224 45.5
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 2.4e-35 154.1 224 46.0
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 6.9e-35 152.5 223 41.7
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 6.9e-35 152.5 307 39.1
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 1.5e-34 151.4 320 39.4
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 5.9e-34 149.4 224 42.9
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 1.0e-33 148.7 204 47.1
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 1.7e-33 147.9 349 37.5
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.7e-33 147.9 373 36.5
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 1.7e-33 147.9 248 39.9
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 5.0e-33 146.4 352 36.1
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 6.5e-33 146.0 291 38.1
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.5e-33 146.0 349 37.2
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.5e-33 146.0 349 37.2
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 1.9e-32 144.4 364 35.4
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 1.9e-32 144.4 335 40.3
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.5e-32 144.1 321 39.3
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 4.2e-32 143.3 293 39.6
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 7.2e-32 142.5 295 38.0
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 7.2e-32 142.5 323 39.0
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 7.9e-31 139.0 354 36.2
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.8e-30 137.9 229 42.4
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 1.5e-29 134.8 360 33.1
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.0e-29 134.4 318 35.8
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 2.0e-29 134.4 307 34.9
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 2.5e-29 134.0 316 36.4
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 5.7e-29 132.9 357 34.5
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 5.7e-29 132.9 352 34.7
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.2e-28 131.0 351 32.8
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 6.3e-28 129.4 314 37.6
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 8.2e-28 129.0 354 35.0
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 1.1e-27 128.6 326 34.0
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 2.4e-27 127.5 359 35.7
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 2.6e-26 124.0 294 39.1
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 7.7e-26 122.5 351 35.6
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 7.7e-26 122.5 351 35.6
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 2.2e-25 120.9 351 35.0
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 2.9e-25 120.6 245 39.2
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 1.4e-24 118.2 296 36.8
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 1.4e-24 118.2 220 40.0
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 5.5e-24 116.3 322 36.3
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 6.1e-23 112.8 306 34.3
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.0e-22 112.1 157 45.9
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 7.4e-21 105.9 339 32.2
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.0e-18 97.8 339 30.7
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 2.0e-18 97.8 186 37.6
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 4.5e-18 96.7 226 39.4
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 2.2e-17 94.4 161 39.1
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 2.4e-11 74.3 223 31.8
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 4.1e-11 73.6 91 52.7
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 5.3e-11 73.2 227 30.0
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 3.5e-10 70.5 346 28.9
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.7e-09 68.2 230 31.7
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.9e-08 64.7 220 30.9
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 2.5e-08 64.3 228 31.1
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.2e-07 62.0 226 30.5
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.2e-07 62.0 269 30.5
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 2.7e-07 60.8 226 29.6
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 3.6e-07 60.5 217 28.6
AagrBONN_evm.TU.Sc2ySwM_368.250 Anthoceros agrestis HOM05D029953 ORTHO05D009567 1.4e-06 58.5 225 25.3
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 3.0e-06 57.4 180 30.6
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.0e-06 57.0 261 29.5
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 6.8e-06 56.2 265 27.2


User provided reference genes

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