Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold304G47898 Striga asiatica HOM05D006764 ORTHO05D008516 2.3e-162 575.5 282 100.0
Oeu023412.2 Olea europaea HOM05D006764 ORTHO05D008516 4.2e-116 421.8 289 73.0
Cc02_g22970 Coffea canephora HOM05D006764 ORTHO05D008516 7.9e-115 417.5 279 72.8
Dinv01845 Davidia involucrata HOM05D006764 ORTHO05D008516 2.5e-113 412.5 279 72.0
Actinidia39013 Actinidia chinensis HOM05D006764 ORTHO05D008516 1.3e-112 410.2 279 71.7
GSVIVG01023281001 Vitis vinifera HOM05D006764 ORTHO05D008516 1.2e-110 403.7 277 71.8
CSS0013576 Camellia sinensis var. sinensis HOM05D006764 ORTHO05D008516 1.4e-108 396.7 273 71.1
Atru.chr6.751 Acer truncatum HOM05D006764 ORTHO05D008516 1.2e-107 393.7 272 71.0
TAR628G0031 Trochodendron aralioides HOM05D006764 ORTHO05D008516 1.2e-107 393.7 279 68.8
Prupe.1G576600 Prunus persica HOM05D006764 ORTHO05D008516 1.0e-106 390.6 288 67.0
Potri.004G222300 Populus trichocarpa HOM05D006764 ORTHO05D008516 2.3e-106 389.4 282 68.4
vmacro01728 Vaccinium macrocarpon HOM05D006764 ORTHO05D008516 2.3e-106 389.4 279 68.1
PGR042G2798 Punica granatum HOM05D006764 ORTHO05D008516 1.5e-105 386.7 275 68.7
Manes.07G022500 Manihot esculenta HOM05D006764 ORTHO05D008516 1.7e-104 383.3 277 69.3
HanXRQChr10g0294521 Helianthus annuus HOM05D006764 ORTHO05D008516 4.8e-104 381.7 283 67.8
MD08G1240100 Malus domestica HOM05D006764 ORTHO05D008516 1.1e-103 380.6 282 64.9
Rhsim11G0125600 Rhododendron simsii HOM05D006764 ORTHO05D008516 1.8e-103 379.8 279 67.0
Migut.B00802 Erythranthe guttata HOM05D006764 ORTHO05D008516 7.0e-103 377.9 282 69.9
MD15G1432200 Malus domestica HOM05D006764 ORTHO05D008516 7.0e-103 377.9 276 65.6
ECA234G3405 Erigeron canadensis HOM05D006764 ORTHO05D008516 5.9e-102 374.8 279 67.0
Sopen10g013910 Solanum pennellii HOM05D006764 ORTHO05D008516 5.9e-102 374.8 271 67.2
RcHm_v2.0_Chr7g0220831 Rosa chinensis HOM05D006764 ORTHO05D008516 3.8e-101 372.1 279 65.6
CiPaw.05G051400 Carya illinoinensis HOM05D006764 ORTHO05D008516 5.0e-101 371.7 273 66.7
QL02p099872 Quercus lobata HOM05D006764 ORTHO05D008516 5.0e-101 371.7 273 67.0
FvH4_5g28680 Fragaria vesca HOM05D006764 ORTHO05D008516 6.5e-101 371.3 273 66.7
Solyc10g044910.2 Solanum lycopersicum HOM05D006764 ORTHO05D008516 6.5e-101 371.3 271 66.8
Gohir.A04G130100 Gossypium hirsutum HOM05D006764 ORTHO05D008516 2.1e-99 366.3 283 63.6
ClCG11G013370 Citrullus lanatus HOM05D006764 ORTHO05D008516 2.3e-98 362.8 271 64.9
Gorai.012G166600 Gossypium raimondii HOM05D006764 ORTHO05D008516 3.0e-98 362.5 283 62.9
Thecc.02G025400 Theobroma cacao HOM05D006764 ORTHO05D008516 4.0e-98 362.1 275 65.8
Eucgr.G00355 Eucalyptus grandis HOM05D006764 ORTHO05D008516 5.2e-98 361.7 268 63.4
Gohir.D04G175300 Gossypium hirsutum HOM05D006764 ORTHO05D008516 8.8e-98 360.9 283 62.9
Medtr2g006100 Medicago truncatula HOM05D006764 ORTHO05D008516 4.4e-97 358.6 273 65.2
unitig_748.g8283 Utricularia gibba HOM05D006764 ORTHO05D008516 7.4e-97 357.8 281 64.4
Lj6g0021331 Lotus japonicus HOM05D006764 ORTHO05D008516 2.2e-96 356.3 275 65.8
Psat1g221840 Pisum sativum HOM05D006764 ORTHO05D008516 2.8e-96 355.9 273 64.1
Ciclev10001742m.g Citrus clementina HOM05D006764 ORTHO05D008516 3.7e-96 355.5 286 62.9
MELO3C011834.2 Cucumis melo HOM05D006764 ORTHO05D008516 8.2e-96 354.4 271 64.2
CsaV3_5G029880 Cucumis sativus L. HOM05D006764 ORTHO05D008516 2.4e-95 352.8 271 64.2
CANSAT54G1059 Cannabis sativa HOM05D006764 ORTHO05D008516 1.2e-94 350.5 272 62.1
Nitab4.5_0000667g0120 Nicotiana tabacum HOM05D006764 ORTHO05D008516 2.6e-94 349.4 290 61.7
THA.LOC104807147 Tarenaya hassleriana HOM05D006764 ORTHO05D008516 2.6e-94 349.4 271 63.8
Glyma.12G168200 Glycine max HOM05D006764 ORTHO05D008516 3.5e-94 349.0 276 62.3
Sabra01G0168400 Salix brachista HOM05D006764 ORTHO05D008516 7.7e-94 347.8 282 62.4
arahy.Tifrunner.gnm1.ann1.0E87YT Arachis hypogaea HOM05D006764 ORTHO05D008516 1.0e-93 347.4 278 60.8
CARHR260060 Cardamine hirsuta HOM05D006764 ORTHO05D008516 1.3e-93 347.1 273 64.1
arahy.Tifrunner.gnm1.ann1.FMX4TW Arachis hypogaea HOM05D006764 ORTHO05D008516 2.2e-93 346.3 278 60.8
Sc16g0001680 Simmondsia chinensis HOM05D006764 ORTHO05D008516 2.2e-93 346.3 279 60.9
AL6G41260 Arabidopsis lyrata HOM05D006764 ORTHO05D008516 2.9e-93 345.9 275 63.3
AT4G06676 Arabidopsis thaliana HOM05D006764 ORTHO05D008516 2.9e-93 345.9 275 63.6
VMungo0540G1274 Vigna mungo HOM05D006764 ORTHO05D008516 2.9e-93 345.9 274 63.1
EL10Ac6g14065 Beta vulgaris HOM05D006764 ORTHO05D008516 6.5e-93 344.7 271 62.7
TPR.G2075 Trifolium pratense HOM05D006764 ORTHO05D008516 8.5e-93 344.4 274 62.0
Glyma.16G004200 Glycine max HOM05D006764 ORTHO05D008516 1.1e-92 344.0 273 62.3
Phvul.006G217900 Phaseolus vulgaris HOM05D006764 ORTHO05D008516 1.1e-92 344.0 270 62.6
PSO170G2545 Papaver somniferum HOM05D006764 ORTHO05D008516 3.6e-91 339.0 269 59.9
Nn5g27693 Nelumbo nucifera HOM05D006764 ORTHO05D008516 1.2e-89 334.0 278 60.1
TWI59G0639 Tripterygium wilfordii HOM05D006764 ORTHO05D008516 4.4e-89 332.0 275 60.4
BcaB01g01263 Brassica carinata HOM05D006764 ORTHO05D008516 1.7e-88 330.1 273 62.3
BcaC04g20869 Brassica carinata HOM05D006764 ORTHO05D008516 2.0e-86 323.2 273 61.9
A09p30490 Brassica napus HOM05D006764 ORTHO05D008516 2.0e-86 323.2 274 61.3
BraA09t38619Z Brassica rapa HOM05D006764 ORTHO05D008516 2.0e-86 323.2 274 61.3
Carub.0006s2639 Capsella rubella HOM05D006764 ORTHO05D008516 1.0e-85 320.9 273 61.2
Aqoxy6G00131 Aquilegia oxysepala HOM05D006764 ORTHO05D008516 1.3e-85 320.5 278 55.8
FAN13G1303 Fragaria x ananassa HOM05D006764 ORTHO05D008516 3.8e-85 318.9 296 56.4
Lalb_Chr18g0061021 Lupinus albus HOM05D006764 ORTHO05D008516 1.5e-84 317.0 269 59.5
FAN18G3575 Fragaria x ananassa HOM05D006764 ORTHO05D008516 4.2e-84 315.5 273 59.0
HPP92_009268 Vanilla planifolia HOM05D006764 ORTHO05D008516 7.2e-84 314.7 271 56.5
FAN08G1175 Fragaria x ananassa HOM05D006764 ORTHO05D008516 1.2e-83 313.9 288 57.6
Peaxi162Scf00002g00261 Petunia axillaris HOM05D006764 ORTHO05D008516 6.1e-83 311.6 279 58.1
Aa31LG3G14080 Aethionema arabicum HOM05D006764 ORTHO05D008516 8.8e-82 307.8 279 58.4
BolC9t56687H Brassica oleracea HOM05D006764 ORTHO05D008516 3.4e-81 305.8 257 61.9
Thhalv10028801m.g Eutrema salsugineum HOM05D006764 ORTHO05D008516 1.7e-80 303.5 273 57.1
AUR62042713 Chenopodium quinoa HOM05D006764 ORTHO05D008516 5.4e-79 298.5 272 54.4
MBI17_g21477_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 5.4e-79 298.5 266 56.4
CAN.G1108.5 Capsicum annuum HOM05D006764 ORTHO05D008516 7.0e-79 298.1 216 65.7
C09p38380 Brassica napus HOM05D006764 ORTHO05D008516 2.3e-77 293.1 265 58.9
Nitab4.5_0008098g0020 Nicotiana tabacum HOM05D006764 ORTHO05D008516 1.5e-73 280.4 253 57.3
COL.COLO4_17757 Corchorus olitorius HOM05D006764 ORTHO05D008516 7.5e-73 278.1 280 57.9
ATR0709G017 Amborella trichopoda HOM05D006764 ORTHO05D008516 4.9e-72 275.4 275 51.3
Duzib132G0537 Durio zibethinus HOM05D006764 ORTHO05D008516 9.2e-71 271.2 275 54.2
SEGI_07291 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 1.2e-70 270.8 277 51.6
Ca_00050_v3 Cicer arietinum L. HOM05D006764 ORTHO05D008516 2.0e-70 270.0 248 55.6
Sp6g10710 Schrenkiella parvula HOM05D006764 ORTHO05D008516 1.5e-68 263.8 271 53.5
Zm00001eb082660 Zea mays HOM05D006764 ORTHO05D008516 1.2e-65 254.2 274 48.2
SalBow7G3863 Salvia bowleyana HOM05D006764 ORTHO05D008516 3.4e-65 252.7 154 83.1
SHI04828 Sapria himalayana HOM05D006764 ORTHO05D008516 3.2e-63 246.1 217 61.3
Pp3c15_15530 Physcomitrium patens HOM05D006764 ORTHO05D008516 7.0e-63 245.0 268 48.1
DCAR_029270 Daucus carota HOM05D006764 ORTHO05D008516 1.2e-62 244.2 201 61.2
Lsat_1_v5_gn_5_103781 Lactuca sativa HOM05D006764 ORTHO05D008516 3.0e-61 239.6 187 66.3
Haze_01822 Corylus avellana HOM05D006764 ORTHO05D008516 5.0e-61 238.8 309 44.0
AUR62014213 Chenopodium quinoa HOM05D006764 ORTHO05D008516 4.7e-59 232.3 272 48.2
Mapoly0025s0102 Marchantia polymorpha HOM05D006764 ORTHO05D008516 3.5e-54 216.1 284 39.8
SMO367G0572 Selaginella moellendorffii HOM05D006764 ORTHO05D008516 6.6e-53 211.8 263 44.9
PSO017G2259 Papaver somniferum HOM05D006764 ORTHO05D008516 1.5e-52 210.7 167 60.5
Sed0008550 Sechium edule HOM05D000755 ORTHO05D000642 1.8e-50 203.8 215 52.1
Cpa.g.sc30.47 Carica papaya HOM05D006764 ORTHO05D008516 6.4e-48 195.3 129 73.6
Lj5A261T39 Lonicera japonica HOM05D006764 ORTHO05D008516 1.6e-46 190.7 249 48.2
Cfa005482 Carpinus fangiana HOM05D006764 ORTHO05D008516 2.6e-41 173.3 122 68.9
AagrBONN_evm.TU.Sc2ySwM_228.3284 Anthoceros agrestis HOM05D006764 ORTHO05D008516 1.1e-39 167.9 226 42.9
Hund12938 Selenicereus undatus HOM05D006764 ORTHO05D008516 4.2e-39 166.0 132 62.9
FAN04G0462 Fragaria x ananassa HOM05D006764 ORTHO05D008516 7.3e-36 155.2 84 82.1
SEGI_28644 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 1.4e-34 151.0 115 61.7
CBR_g19125 Chara braunii HOM05D006764 ORTHO05D008516 9.0e-34 148.3 182 39.6
Os04g0433200 Oryza sativa ssp. japonica HOM05D006764 ORTHO05D008516 3.9e-29 132.9 132 51.5
Hund29476 Selenicereus undatus HOM05D006764 ORTHO05D008516 7.4e-28 128.6 125 54.4
Hund29477 Selenicereus undatus HOM05D006764 ORTHO05D008516 7.4e-28 128.6 125 54.4
Cre01.g032350 Chlamydomonas reinhardtii HOM05D006764 ORTHO05D008516 1.3e-27 127.9 277 32.5
MCO04G067 Micromonas commoda HOM05D006764 ORTHO05D008516 4.0e-18 96.3 278 29.1
Nn6g34108 Nelumbo nucifera HOM05D006764 ORTHO05D008516 2.5e-15 87.0 69 55.1
Nn3g16387 Nelumbo nucifera HOM05D006764 ORTHO05D008516 2.3e-13 80.5 63 55.6
Nn1g00311 Nelumbo nucifera HOM05D006764 ORTHO05D008516 6.3e-11 72.4 66 54.5
MBI17_g13541_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 2.4e-10 70.5 49 67.3
Nn1g06486 Nelumbo nucifera HOM05D027421 ORTHO05D008516 9.0e-10 68.6 69 43.5
Cc00_g10410 Coffea canephora HOM05D006764 ORTHO05D008516 6.5e-08 62.4 56 58.9


User provided reference genes

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