Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold302G47866 Striga asiatica HOM05D004054 ORTHO05D004945 0.0e+00 1647.5 836 100.0
Migut.L01344 Erythranthe guttata HOM05D004054 ORTHO05D004945 0.0e+00 1138.3 858 71.1
MSTRG.671 Avicennia marina HOM05D004054 ORTHO05D004945 3.3e-310 1068.1 863 67.3
SalBow2G0733 Salvia bowleyana HOM05D004054 ORTHO05D004945 3.5e-304 1048.1 941 62.3
SalBow2G2854 Salvia bowleyana HOM05D004054 ORTHO05D004945 6.3e-293 1010.7 1021 57.3
Oeu011693.1 Olea europaea HOM05D004054 ORTHO05D004945 3.0e-279 965.3 775 65.0
Sopen05g002990 Solanum pennellii HOM05D004054 ORTHO05D004945 6.5e-274 947.6 866 60.3
Peaxi162Scf00209g00326 Petunia axillaris HOM05D004054 ORTHO05D004945 1.4e-271 939.9 895 57.9
Actinidia05393 Actinidia chinensis HOM05D004054 ORTHO05D004945 3.7e-269 931.8 871 60.4
Nitab4.5_0009649g0020 Nicotiana tabacum HOM05D004054 ORTHO05D004945 1.1e-268 930.2 845 60.6
Rhsim01G0215700 Rhododendron simsii HOM05D004054 ORTHO05D004945 1.1e-265 920.2 865 58.4
TAR362G0462 Trochodendron aralioides HOM05D004054 ORTHO05D004945 3.6e-264 915.2 877 59.0
Oeu028539.1 Olea europaea HOM05D004054 ORTHO05D004945 6.1e-264 914.4 900 57.6
Cfa009037 Carpinus fangiana HOM05D004054 ORTHO05D004945 1.1e-260 903.7 874 58.4
Nitab4.5_0008717g0030 Nicotiana tabacum HOM05D004054 ORTHO05D004945 2.4e-260 902.5 846 59.7
Thecc.02G355300 Theobroma cacao HOM05D004054 ORTHO05D004945 1.5e-254 883.2 870 57.2
Cc11_g13490 Coffea canephora HOM05D004054 ORTHO05D004945 5.7e-254 881.3 868 56.9
QL03p065666 Quercus lobata HOM05D004054 ORTHO05D004945 5.4e-252 874.8 876 56.5
MBI11_g00106_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 1.1e-249 867.1 880 55.3
vmacro07429 Vaccinium macrocarpon HOM05D004054 ORTHO05D004945 2.5e-249 865.9 938 54.4
CSS0048330 Camellia sinensis var. sinensis HOM05D004054 ORTHO05D004945 1.0e-247 860.5 851 56.9
MD13G1079000 Malus domestica HOM05D004054 ORTHO05D004945 1.2e-246 857.1 855 57.8
Prupe.1G267800 Prunus persica HOM05D004054 ORTHO05D004945 2.6e-246 855.9 880 57.3
GSVIVG01036940001 Vitis vinifera HOM05D004054 ORTHO05D004945 2.6e-246 855.9 872 57.0
Lsat_1_v5_gn_8_54080 Lactuca sativa HOM05D004054 ORTHO05D004945 1.9e-244 849.7 881 56.5
Duzib268G1532 Durio zibethinus HOM05D004054 ORTHO05D004945 2.4e-244 849.4 874 55.3
MBI17_g39912_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 3.2e-244 849.0 855 55.9
Ciclev10030693m.g Citrus clementina HOM05D004054 ORTHO05D004945 2.0e-243 846.3 873 55.3
Haze_12066 Corylus avellana HOM05D004054 ORTHO05D004945 3.5e-243 845.5 981 52.1
DCAR_027382 Daucus carota HOM05D004054 ORTHO05D004945 8.6e-242 840.9 863 55.4
COL.COLO4_07923 Corchorus olitorius HOM05D004054 ORTHO05D004945 4.3e-241 838.6 867 55.6
ECA247G4086 Erigeron canadensis HOM05D004054 ORTHO05D004945 5.6e-241 838.2 865 55.8
Gohir.A13G052300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.2e-240 837.0 873 54.4
Gorai.013G077900 Gossypium raimondii HOM05D004054 ORTHO05D004945 4.7e-240 835.1 871 54.8
TWI36G0714 Tripterygium wilfordii HOM05D004054 ORTHO05D004945 3.1e-239 832.4 874 54.3
RcHm_v2.0_Chr4g0440641 Rosa chinensis HOM05D004054 ORTHO05D004945 3.4e-238 828.9 854 56.2
Aqoxy5G00175 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 7.5e-238 827.8 885 54.5
Gohir.D13G068400 Gossypium hirsutum HOM05D004054 ORTHO05D004945 7.5e-238 827.8 871 54.6
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla HOM05D004054 ORTHO05D004945 7.5e-238 827.8 753 61.0
ClCG05G024580 Citrullus lanatus HOM05D004054 ORTHO05D004945 9.8e-238 827.4 888 53.4
PGR102G2139 Punica granatum HOM05D004054 ORTHO05D004945 2.9e-237 825.9 867 54.1
CsaV3_5G032370 Cucumis sativus L. HOM05D004054 ORTHO05D004945 6.4e-237 824.7 869 54.4
RcHm_v2.0_Chr1g0353921 Rosa chinensis HOM05D004054 ORTHO05D004945 1.9e-236 823.2 865 55.3
PSO832G3945 Papaver somniferum HOM05D004054 ORTHO05D004945 3.2e-236 822.4 879 54.3
FAN12G3951 Fragaria x ananassa HOM05D004054 ORTHO05D004945 4.1e-236 822.0 869 54.9
FvH4_4g31960 Fragaria vesca HOM05D004054 ORTHO05D004945 7.1e-236 821.2 870 55.1
RcHm_v2.0_Chr1g0331881 Rosa chinensis HOM05D004054 ORTHO05D004945 7.1e-236 821.2 867 55.6
GSVIVG01020074001 Vitis vinifera HOM05D004054 ORTHO05D004945 2.1e-235 819.7 880 54.8
MD16G1078700 Malus domestica HOM05D004054 ORTHO05D004945 1.3e-234 817.0 771 60.1
Medtr8g469270 Medicago truncatula HOM05D004054 ORTHO05D004945 1.7e-234 816.6 792 57.1
Sc11g0001680 Simmondsia chinensis HOM05D004054 ORTHO05D004945 8.6e-234 814.3 852 54.5
FAN22G1878 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.2e-232 810.4 876 54.6
FAN17G1509 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.4e-231 807.0 869 54.4
TPR.G33257 Trifolium pratense HOM05D004054 ORTHO05D004945 2.3e-231 806.2 848 54.4
Glyma.08G296300 Glycine max HOM05D004054 ORTHO05D004945 6.8e-231 804.7 874 53.5
FAN07G1439 Fragaria x ananassa HOM05D004054 ORTHO05D004945 7.6e-230 801.2 850 55.5
PSO764G0096 Papaver somniferum HOM05D004054 ORTHO05D004945 1.3e-229 800.4 885 52.9
Ca_22853_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 4.9e-229 798.5 876 53.3
Duzib248G1634 Durio zibethinus HOM05D004054 ORTHO05D004945 6.4e-229 798.1 869 52.9
Eucgr.B03410 Eucalyptus grandis HOM05D004054 ORTHO05D004945 8.3e-229 797.7 876 52.1
Dinv24955 Davidia involucrata HOM05D004054 ORTHO05D004945 1.1e-228 797.3 720 61.9
Glyma.18G126000 Glycine max HOM05D004054 ORTHO05D004945 1.9e-228 796.6 877 53.1
Phvul.003G069800 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 7.1e-228 794.7 872 53.2
AT3G17900 Arabidopsis thaliana HOM05D004054 ORTHO05D004945 9.2e-228 794.3 870 53.3
HanXRQChr12g0369801 Helianthus annuus HOM05D004054 ORTHO05D004945 2.7e-227 792.7 863 54.5
Potri.010G033900 Populus trichocarpa HOM05D004054 ORTHO05D004945 6.0e-227 791.6 859 54.6
Psat4g132120 Pisum sativum HOM05D004054 ORTHO05D004945 1.3e-226 790.4 833 54.6
Sed0026408 Sechium edule HOM05D004054 ORTHO05D004945 6.6e-226 788.1 871 52.2
Carub.0003s1763 Capsella rubella HOM05D004054 ORTHO05D004945 8.6e-226 787.7 870 53.2
Gorai.008G182900 Gossypium raimondii HOM05D004054 ORTHO05D004945 1.1e-225 787.3 877 52.2
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea HOM05D004054 ORTHO05D004945 2.5e-225 786.2 868 52.8
MELO3C012068.2 Cucumis melo HOM05D004054 ORTHO05D004945 4.3e-225 785.4 855 53.1
Lj4g0012636 Lotus japonicus HOM05D004054 ORTHO05D004945 9.6e-225 784.3 863 52.8
CARHR093230 Cardamine hirsuta HOM05D004054 ORTHO05D004945 1.6e-224 783.5 870 53.1
VMungo0251G1664 Vigna mungo HOM05D004054 ORTHO05D004945 6.2e-224 781.6 837 53.2
AL3G31070 Arabidopsis lyrata HOM05D004054 ORTHO05D004945 8.1e-224 781.2 875 52.6
Thhalv10020058m.g Eutrema salsugineum HOM05D004054 ORTHO05D004945 2.4e-223 779.6 871 52.6
Sp3g16020 Schrenkiella parvula HOM05D004054 ORTHO05D004945 2.6e-222 776.2 872 52.3
Lalb_Chr16g0392581 Lupinus albus HOM05D004054 ORTHO05D004945 6.4e-221 771.5 884 50.3
Atru.chr11.1851 Acer truncatum HOM05D004054 ORTHO05D004945 2.4e-220 769.6 879 52.4
Gohir.D12G170300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.5e-217 760.4 854 51.8
Sabra10G0030700 Salix brachista HOM05D004054 ORTHO05D004945 2.1e-216 756.5 917 50.9
Hund25271 Selenicereus undatus HOM05D004054 ORTHO05D004945 4.8e-216 755.4 837 52.9
Solyc05g007030.4 Solanum lycopersicum HOM05D004054 ORTHO05D004945 1.2e-214 750.7 605 65.6
AUR62026447 Chenopodium quinoa HOM05D004054 ORTHO05D004945 1.3e-213 747.3 847 52.7
THA.LOC104820344 Tarenaya hassleriana HOM05D004054 ORTHO05D004945 1.7e-213 746.9 873 50.3
C03p49280 Brassica napus HOM05D004054 ORTHO05D004945 2.4e-212 743.0 871 51.9
BraA03t13202Z Brassica rapa HOM05D004054 ORTHO05D004945 2.4e-212 743.0 876 52.1
BcaB04g20809 Brassica carinata HOM05D004054 ORTHO05D004945 3.2e-212 742.7 879 50.9
BcaC09g48754 Brassica carinata HOM05D004054 ORTHO05D004945 4.2e-212 742.3 874 51.5
A01p36490 Brassica napus HOM05D004054 ORTHO05D004945 1.2e-211 740.7 873 51.1
C01p46250 Brassica napus HOM05D004054 ORTHO05D004945 1.0e-210 737.6 874 51.4
BolC1t04586H Brassica oleracea HOM05D004054 ORTHO05D004945 1.1e-209 734.2 874 51.1
BraA01t03713Z Brassica rapa HOM05D004054 ORTHO05D004945 1.9e-209 733.4 877 51.2
Psat2g124400 Pisum sativum HOM05D004054 ORTHO05D004945 3.3e-209 732.6 865 49.9
Aa31LG8G4770 Aethionema arabicum HOM05D004054 ORTHO05D004945 5.6e-209 731.9 924 48.3
BolC3t17216H Brassica oleracea HOM05D004054 ORTHO05D004945 5.6e-209 731.9 870 51.7
Glyma.02G021900 Glycine max HOM05D004054 ORTHO05D004945 7.3e-209 731.5 781 53.4
Lalb_Chr09g0335271 Lupinus albus HOM05D004054 ORTHO05D004945 1.1e-207 727.6 786 53.3
Manes.05G096500 Manihot esculenta HOM05D004054 ORTHO05D004945 3.1e-207 726.1 752 55.6
ATR0564G248 Amborella trichopoda HOM05D004054 ORTHO05D004945 2.6e-206 723.0 865 49.2
AUR62026254 Chenopodium quinoa HOM05D004054 ORTHO05D004945 2.2e-205 719.9 843 51.8
Ca_04741_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 2.8e-200 703.0 851 49.9
BcaB04g18970 Brassica carinata HOM05D004054 ORTHO05D004945 4.8e-200 702.2 874 50.5
HPP92_011033 Vanilla planifolia HOM05D004054 ORTHO05D004945 3.1e-199 699.5 875 49.0
Medtr5g038440 Medicago truncatula HOM05D004054 ORTHO05D004945 1.5e-198 697.2 862 49.8
Nn3g19739 Nelumbo nucifera HOM05D004054 ORTHO05D004945 6.0e-195 685.3 729 53.9
Hund05913 Selenicereus undatus HOM05D004054 ORTHO05D004945 6.0e-195 685.3 816 50.5
unitig_22.g6528 Utricularia gibba HOM05D004054 ORTHO05D004945 5.3e-191 672.2 875 49.5
BcaC01g03722 Brassica carinata HOM05D004054 ORTHO05D004945 2.6e-190 669.8 874 49.3
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 1.4e-188 664.1 748 53.2
TPR.G13762 Trifolium pratense HOM05D004054 ORTHO05D004945 3.7e-184 649.4 793 48.7
CDE09G0195 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 1.8e-183 647.1 887 45.2
Zm00001eb409770 Zea mays HOM05D004054 ORTHO05D004945 2.9e-181 639.8 869 46.1
Lalb_Chr17g0340361 Lupinus albus HOM05D004054 ORTHO05D004945 8.5e-181 638.3 806 47.6
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea HOM05D004054 ORTHO05D004945 2.5e-180 636.7 778 48.6
Lj2g0020807 Lotus japonicus HOM05D004054 ORTHO05D004945 2.5e-180 636.7 727 51.0
EL10Ac6g13147 Beta vulgaris HOM05D004054 ORTHO05D004945 1.6e-179 634.0 865 46.2
SEGI_39580 Sequoiadendron giganteum HOM05D004054 ORTHO05D004945 1.0e-173 614.8 911 41.7
Cpa.g.sc5.276 Carica papaya HOM05D004054 ORTHO05D004945 1.3e-168 597.8 557 58.5
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea HOM05D004054 ORTHO05D004945 1.1e-164 584.7 779 46.3
Lsat_1_v5_gn_4_9281 Lactuca sativa HOM05D004054 ORTHO05D004945 4.0e-162 576.2 778 45.1
ECA234G1496 Erigeron canadensis HOM05D004054 ORTHO05D004945 4.0e-154 549.7 836 43.1
HanXRQChr03g0092771 Helianthus annuus HOM05D004054 ORTHO05D004945 4.2e-148 529.6 751 44.6
Gohir.A12G166800 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.8e-146 524.2 555 53.9
Nn1g02896 Nelumbo nucifera HOM05D004054 ORTHO05D004945 6.3e-144 515.8 872 40.7
VMungo1215G1372 Vigna mungo HOM05D004054 ORTHO05D004945 3.1e-143 513.5 955 37.9
Ah.03g132020 Amaranthus hybridus HOM05D004054 ORTHO05D004945 2.9e-141 506.9 592 50.5
CDE02G2379 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 3.0e-138 496.9 673 43.5
CiPaw.06G080700 Carya illinoinensis HOM05D004054 ORTHO05D004945 3.7e-136 490.0 441 61.0
unitig_8.g3947 Utricularia gibba HOM05D004054 ORTHO05D004945 2.0e-129 467.6 527 50.7
Mapoly0224s0002 Marchantia polymorpha HOM05D004054 ORTHO05D004945 1.2e-126 458.4 871 36.4
Zm00001eb066230 Zea mays HOM05D004054 ORTHO05D004945 7.8e-126 455.7 606 47.9
Phvul.002G066700 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 1.9e-124 451.1 499 50.3
Pp3c16_680 Physcomitrium patens HOM05D004054 ORTHO05D004945 1.6e-107 394.8 798 33.5
SMO119G0368 Selaginella moellendorffii HOM05D004054 ORTHO05D004945 5.6e-92 343.2 655 36.6
AagrBONN_evm.TU.Sc2ySwM_228.4114 Anthoceros agrestis HOM05D004054 ORTHO05D004945 2.1e-86 324.7 725 33.4
CiPaw.06G080600 Carya illinoinensis HOM05D004054 ORTHO05D004945 3.4e-81 307.4 370 49.7
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 1.0e-80 305.8 436 44.3
Cpa.g.sc5.277 Carica papaya HOM05D004054 ORTHO05D004945 3.3e-68 264.2 325 47.4
Potri.008G194566 Populus trichocarpa HOM05D004054 ORTHO05D004945 1.7e-59 235.3 260 53.5
Phvul.002G066500 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 2.0e-57 228.4 277 49.8
Gohir.A12G166900 Gossypium hirsutum HOM05D004054 ORTHO05D004945 8.8e-53 213.0 252 49.6
MSTRG.2359 Avicennia marina HOM05D004054 ORTHO05D004945 8.0e-46 189.9 168 62.5
Potri.008G194632 Populus trichocarpa HOM05D004054 ORTHO05D004945 5.2e-37 160.6 195 53.8
C02p33030 Brassica napus HOM05D004054 ORTHO05D004945 1.2e-33 149.4 164 50.0
RcHm_v2.0_Chr1g0331861 Rosa chinensis HOM05D004054 ORTHO05D004945 7.7e-33 146.7 138 58.7
C03p36410 Brassica napus HOM05D004054 ORTHO05D004945 3.4e-28 131.3 193 41.5
BolC3t15954H Brassica oleracea HOM05D004054 ORTHO05D004945 3.4e-28 131.3 193 41.5
A05p04500 Brassica napus HOM05D004054 ORTHO05D004945 6.6e-24 117.1 190 40.0
C03p62480 Brassica napus HOM05D004054 ORTHO05D004945 6.6e-24 117.1 190 40.0
unitig_8.g3946 Utricularia gibba HOM05D004054 ORTHO05D004945 8.6e-24 116.7 191 40.3
CAN.G793.43 Capsicum annuum HOM05D004054 ORTHO05D004945 1.8e-18 99.0 179 41.9
A01p41860 Brassica napus HOM05D004054 ORTHO05D004945 4.1e-18 97.8 109 47.7
CBR_g39858 Chara braunii HOM05D004054 ORTHO05D009492 4.6e-17 94.4 389 25.2
Lalb_Chr17g0340371 Lupinus albus HOM05D004054 ORTHO05D004945 3.9e-16 91.3 60 73.3
C06p17170 Brassica napus HOM05D004054 ORTHO05D004945 9.5e-15 86.7 167 36.5
C08p43480 Brassica napus HOM05D004054 ORTHO05D004945 3.6e-14 84.7 139 43.2
BolC3t18505H Brassica oleracea HOM05D004054 ORTHO05D004945 1.4e-13 82.8 204 32.4
BcaC08g44394 Brassica carinata HOM05D004054 ORTHO05D004945 1.7e-11 75.9 166 33.7
Lsat_1_v5_gn_3_52120 Lactuca sativa HOM05D004054 ORTHO05D004945 1.7e-11 75.9 66 51.5
Oeu011694.1 Olea europaea HOM05D004054 ORTHO05D049449 2.4e-10 72.0 96 46.9
Lsat_1_v5_gn_7_73540 Lactuca sativa HOM05D004054 ORTHO05D004945 9.2e-10 70.1 66 51.5
MBI09_g47007_MAGBIO Magnolia biondii HOM05D003023 ORTHO05D018021 2.7e-09 68.6 96 42.7
Lsat_1_v5_gn_5_60100 Lactuca sativa HOM05D004054 ORTHO05D036438 3.5e-09 68.2 84 51.2
A06p30220 Brassica napus HOM05D003604 ORTHO05D004110 1.7e-08 65.9 73 56.2
C06p10280 Brassica napus HOM05D011797 ORTHO05D012335 3.0e-08 65.1 48 70.8
PGSC0003DMG402017622 Solanum tuberosum HOM05D004054 ORTHO05D004945 3.0e-08 65.1 101 44.6
CBR_g39853 Chara braunii HOM05D000019 ORTHO05D000002 9.5e-07 60.1 47 55.3
Dinv34201 Davidia involucrata HOM05D004054 ORTHO05D004945 1.2e-06 59.7 61 52.5
CBR_g39856 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-06 58.5 213 23.5


User provided reference genes

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