Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 1.2e-98 363.2 198 100.0
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 8.4e-71 270.8 202 75.7
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 6.0e-69 264.6 169 79.9
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 1.3e-68 263.5 182 73.6
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 2.3e-68 262.7 200 72.0
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 2.3e-68 262.7 193 71.0
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 3.0e-68 262.3 198 70.7
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 3.0e-68 262.3 198 70.7
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 3.0e-68 262.3 165 78.8
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 6.7e-68 261.2 176 76.7
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 8.7e-68 260.8 174 76.4
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 8.7e-68 260.8 174 76.4
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 1.9e-67 259.6 194 70.6
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 3.3e-67 258.8 197 69.5
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 7.4e-67 257.7 183 73.8
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 1.3e-66 256.9 200 69.0
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 1.6e-66 256.5 198 68.2
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 2.1e-66 256.1 197 71.1
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.7e-66 255.4 199 68.8
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 3.7e-66 255.4 201 69.7
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 6.2e-66 254.6 201 68.7
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 6.2e-66 254.6 179 72.6
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.4e-65 253.4 162 77.8
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 1.4e-65 253.4 197 75.6
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 1.4e-65 253.4 186 74.2
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.8e-65 253.1 162 77.8
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.8e-65 253.1 202 68.3
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 1.8e-65 253.1 167 80.8
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 2.4e-65 252.7 171 74.3
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 2.4e-65 252.7 202 68.3
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 4.0e-65 251.9 199 70.4
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 1.2e-64 250.4 204 70.1
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 1.2e-64 250.4 200 68.0
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 1.2e-64 250.4 202 70.3
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 3.4e-64 248.8 162 78.4
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.4e-64 248.8 160 79.4
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 3.4e-64 248.8 198 68.7
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 4.5e-64 248.4 174 71.3
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 4.5e-64 248.4 181 71.8
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 5.8e-64 248.1 204 69.1
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 7.6e-64 247.7 162 79.0
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.0e-63 247.3 197 66.5
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 1.3e-63 246.9 199 67.8
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 1.3e-63 246.9 199 65.8
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.3e-63 246.9 202 69.3
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.7e-63 246.5 203 66.5
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 2.9e-63 245.7 186 73.1
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 3.8e-63 245.4 198 69.7
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 3.8e-63 245.4 185 73.0
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 8.4e-63 244.2 183 69.9
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 8.4e-63 244.2 199 71.4
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 8.4e-63 244.2 199 67.3
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 1.1e-62 243.8 186 72.6
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 1.1e-62 243.8 167 76.0
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.4e-62 243.4 197 65.5
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 1.9e-62 243.0 200 71.0
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 2.5e-62 242.7 173 71.1
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 4.2e-62 241.9 173 73.4
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 5.5e-62 241.5 164 74.4
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 7.1e-62 241.1 202 67.3
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 9.3e-62 240.7 163 79.1
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.2e-61 240.4 183 68.9
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 1.6e-61 240.0 169 72.8
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 2.7e-61 239.2 198 66.7
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 4.6e-61 238.4 194 66.0
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 4.6e-61 238.4 202 65.8
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 7.9e-61 237.7 165 78.8
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 1.0e-60 237.3 170 72.4
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 1.3e-60 236.9 168 72.6
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.3e-60 236.9 173 72.8
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 3.0e-60 235.7 172 75.6
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 3.9e-60 235.3 179 70.9
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.9e-60 235.3 173 71.7
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 5.1e-60 235.0 125 89.6
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 5.1e-60 235.0 169 69.8
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 8.7e-60 234.2 129 86.0
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 8.7e-60 234.2 129 86.0
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 1.9e-59 233.0 163 73.0
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.9e-59 233.0 129 85.3
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 3.3e-59 232.3 129 84.5
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 3.3e-59 232.3 129 84.5
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 5.7e-59 231.5 198 64.6
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 5.7e-59 231.5 198 64.6
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.3e-58 230.3 201 66.7
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 3.7e-58 228.8 161 73.9
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 4.8e-58 228.4 187 63.1
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 4.8e-58 228.4 128 84.4
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 6.3e-58 228.0 199 65.8
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 3.1e-57 225.7 160 73.1
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 3.4e-56 222.2 168 67.9
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 3.8e-55 218.8 200 63.0
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 6.5e-55 218.0 121 86.0
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 8.4e-55 217.6 198 66.7
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 3.5e-53 212.2 116 84.5
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.5e-51 206.8 139 73.4
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 9.7e-51 204.1 176 58.0
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 6.9e-49 198.0 176 56.8
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.2e-48 197.2 129 76.0
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 2.9e-47 192.6 112 75.9
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 6.5e-47 191.4 113 78.8
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 3.2e-46 189.1 173 60.7
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 1.2e-45 187.2 113 74.3
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 6.1e-45 184.9 113 76.1
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.8e-44 183.3 113 77.0
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 1.3e-42 177.2 108 74.1
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 2.9e-39 166.0 173 55.5
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.2e-37 160.6 198 54.0
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 5.1e-36 155.2 110 62.7
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.9e-22 110.2 127 40.2
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 2.8e-18 96.3 109 40.4
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 1.6e-16 90.5 52 76.9
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 2.7e-16 89.7 106 44.3
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 2.3e-12 76.6 134 27.6


User provided reference genes

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