Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold302G47835 Striga asiatica HOM05D006518 ORTHO05D008270 2.2e-134 482.3 241 100.0
MSTRG.7814 Avicennia marina HOM05D006518 ORTHO05D008270 3.4e-90 335.5 235 73.6
Oeu028298.1 Olea europaea HOM05D006518 ORTHO05D008270 7.3e-85 317.8 231 70.6
SalBow2G0178 Salvia bowleyana HOM05D006518 ORTHO05D008270 1.8e-83 313.2 216 75.0
SalBow2G1811 Salvia bowleyana HOM05D006518 ORTHO05D008270 1.8e-83 313.2 216 75.0
Nitab4.5_0000141g0290 Nicotiana tabacum HOM05D006518 ORTHO05D008270 3.4e-82 308.9 235 69.4
CAN.G38.25 Capsicum annuum HOM05D006518 ORTHO05D008270 4.1e-80 302.0 235 68.1
CSS0005609 Camellia sinensis var. sinensis HOM05D006518 ORTHO05D008270 3.5e-79 298.9 230 67.8
CSS0004247 Camellia sinensis var. sinensis HOM05D006518 ORTHO05D008270 7.8e-79 297.7 230 67.4
Actinidia19864 Actinidia chinensis HOM05D006518 ORTHO05D008270 1.3e-78 297.0 210 71.4
Cc11_g13260 Coffea canephora HOM05D006518 ORTHO05D008270 1.3e-78 297.0 218 69.7
Dinv16627 Davidia involucrata HOM05D006518 ORTHO05D008270 1.3e-78 297.0 227 66.5
COL.COLO4_22979 Corchorus olitorius HOM05D006518 ORTHO05D008270 8.6e-78 294.3 227 68.3
PGR119G2153 Punica granatum HOM05D006518 ORTHO05D008270 2.5e-77 292.7 231 65.8
FAN22G1577 Fragaria x ananassa HOM05D006518 ORTHO05D008270 1.6e-76 290.0 237 67.1
arahy.Tifrunner.gnm1.ann1.251ATU Arachis hypogaea HOM05D006518 ORTHO05D008270 2.1e-76 289.7 207 71.5
Duzib251G0137 Durio zibethinus HOM05D006518 ORTHO05D008270 2.1e-76 289.7 211 69.7
FAN12G4204 Fragaria x ananassa HOM05D006518 ORTHO05D008270 3.6e-76 288.9 238 66.8
FAN17G1605 Fragaria x ananassa HOM05D006518 ORTHO05D008270 4.7e-76 288.5 237 66.2
Sopen01g006240 Solanum pennellii HOM05D006518 ORTHO05D008270 4.7e-76 288.5 235 66.4
Thhalv10008695m.g Eutrema salsugineum HOM05D006518 ORTHO05D008270 6.2e-76 288.1 210 70.5
Solyc01g010590.2 Solanum lycopersicum HOM05D006518 ORTHO05D008270 6.2e-76 288.1 235 66.4
arahy.Tifrunner.gnm1.ann1.YAGN0V Arachis hypogaea HOM05D006518 ORTHO05D008270 8.1e-76 287.7 205 71.7
MBI02_g34551_MAGBIO Magnolia biondii HOM05D006518 ORTHO05D008270 8.1e-76 287.7 205 70.7
Thecc.02G349100 Theobroma cacao HOM05D006518 ORTHO05D008270 8.1e-76 287.7 211 69.7
PGSC0003DMG400000875 Solanum tuberosum HOM05D006518 ORTHO05D008270 1.1e-75 287.3 235 66.8
CiPaw.06G082900 Carya illinoinensis HOM05D006518 ORTHO05D008270 1.4e-75 287.0 211 67.8
MELO3C008553.2 Cucumis melo HOM05D006518 ORTHO05D008270 1.4e-75 287.0 203 71.9
THA.LOC104822922 Tarenaya hassleriana HOM05D006518 ORTHO05D008270 1.4e-75 287.0 220 68.2
Manes.05G099400 Manihot esculenta HOM05D006518 ORTHO05D008270 1.8e-75 286.6 225 66.2
ECA246G2657 Erigeron canadensis HOM05D006518 ORTHO05D008270 3.1e-75 285.8 203 71.9
RcHm_v2.0_Chr4g0440101 Rosa chinensis HOM05D006518 ORTHO05D008270 3.1e-75 285.8 243 65.0
Nn4g23099 Nelumbo nucifera HOM05D006518 ORTHO05D008270 5.2e-75 285.0 205 70.7
Lalb_Chr17g0340541 Lupinus albus HOM05D006518 ORTHO05D008270 6.8e-75 284.6 208 69.2
Sp1g21840 Schrenkiella parvula HOM05D006518 ORTHO05D008270 6.8e-75 284.6 227 66.5
GSVIVG01020024001 Vitis vinifera HOM05D006518 ORTHO05D008270 6.8e-75 284.6 223 65.9
BolC5t31137H Brassica oleracea HOM05D006518 ORTHO05D008270 8.9e-75 284.3 227 66.5
FAN07G2562 Fragaria x ananassa HOM05D006518 ORTHO05D008270 8.9e-75 284.3 237 65.4
Lsat_1_v5_gn_3_52920 Lactuca sativa HOM05D006518 ORTHO05D008270 8.9e-75 284.3 203 70.9
Medtr5g039210 Medicago truncatula HOM05D006518 ORTHO05D008270 8.9e-75 284.3 205 70.7
TPR.G11706 Trifolium pratense HOM05D006518 ORTHO05D008270 8.9e-75 284.3 205 70.7
Atru.chr11.1828 Acer truncatum HOM05D006518 ORTHO05D008270 1.2e-74 283.9 205 71.7
Gohir.D02G124600 Gossypium hirsutum HOM05D006518 ORTHO05D008270 1.2e-74 283.9 211 68.7
BcaC05g26368 Brassica carinata HOM05D006518 ORTHO05D008270 1.5e-74 283.5 228 66.2
Carub.0001s2404 Capsella rubella HOM05D006518 ORTHO05D008270 1.5e-74 283.5 223 66.4
Ca_04765_v3 Cicer arietinum L. HOM05D006518 ORTHO05D008270 2.0e-74 283.1 229 65.9
Aa31LG7G8200 Aethionema arabicum HOM05D006518 ORTHO05D008270 2.6e-74 282.7 227 64.8
Gorai.005G140100 Gossypium raimondii HOM05D006518 ORTHO05D008270 3.4e-74 282.3 211 68.2
Sed0000225 Sechium edule HOM05D006518 ORTHO05D008270 4.4e-74 282.0 203 70.4
A09p40360 Brassica napus HOM05D006518 ORTHO05D008270 5.8e-74 281.6 227 66.1
BraA09t39533Z Brassica rapa HOM05D006518 ORTHO05D008270 5.8e-74 281.6 227 66.1
Potri.010G012900 Populus trichocarpa HOM05D006518 ORTHO05D008270 5.8e-74 281.6 224 66.1
QL03p064826 Quercus lobata HOM05D006518 ORTHO05D008270 5.8e-74 281.6 227 62.6
unitig_22.g6524 Utricularia gibba HOM05D006518 ORTHO05D008270 7.6e-74 281.2 199 70.4
Aqoxy3G03336 Aquilegia oxysepala HOM05D006518 ORTHO05D008270 9.9e-74 280.8 205 69.3
CANSAT64G2267 Cannabis sativa HOM05D006518 ORTHO05D008270 1.3e-73 280.4 211 69.2
CsaV3_2G010590 Cucumis sativus L. HOM05D006518 ORTHO05D008270 1.3e-73 280.4 203 70.4
Gohir.A03G099700 Gossypium hirsutum HOM05D006518 ORTHO05D008270 1.3e-73 280.4 211 68.2
AL1G38610 Arabidopsis lyrata HOM05D006518 ORTHO05D008270 1.7e-73 280.0 226 65.5
Glyma.02G105500 Glycine max HOM05D006518 ORTHO05D008270 1.7e-73 280.0 208 70.2
Nitab4.5_0003566g0030 Nicotiana tabacum HOM05D006518 ORTHO05D008270 1.7e-73 280.0 229 66.8
Eucgr.G02518 Eucalyptus grandis HOM05D006518 ORTHO05D008270 2.2e-73 279.6 205 68.8
Hma1.2p1_0598F.1_g186750 Hydrangea macrophylla HOM05D006518 ORTHO05D008270 2.2e-73 279.6 221 66.5
AT1G26940 Arabidopsis thaliana HOM05D006518 ORTHO05D008270 2.9e-73 279.3 223 65.9
ClCG11G007330 Citrullus lanatus HOM05D006518 ORTHO05D008270 3.8e-73 278.9 203 70.0
Sc04g0004950 Simmondsia chinensis HOM05D006518 ORTHO05D008270 4.9e-73 278.5 231 61.0
C08p22660 Brassica napus HOM05D006518 ORTHO05D008270 6.4e-73 278.1 227 65.6
BolC8t49904H Brassica oleracea HOM05D006518 ORTHO05D008270 6.4e-73 278.1 227 65.6
CARHR024970 Cardamine hirsuta HOM05D006518 ORTHO05D008270 6.4e-73 278.1 210 68.6
Psat2g127240 Pisum sativum HOM05D006518 ORTHO05D008270 1.1e-72 277.3 230 64.3
PSO063G1773 Papaver somniferum HOM05D006518 ORTHO05D008270 1.9e-72 276.6 215 67.4
VMungo1215G0700 Vigna mungo HOM05D006518 ORTHO05D008270 1.9e-72 276.6 218 66.5
EL10Ac6g13177 Beta vulgaris HOM05D006518 ORTHO05D008270 3.2e-72 275.8 203 67.0
Lj2g0006932 Lotus japonicus HOM05D006518 ORTHO05D008270 3.2e-72 275.8 204 70.6
A08p27650 Brassica napus HOM05D006518 ORTHO05D008270 9.3e-72 274.2 227 64.8
BraA08t34702Z Brassica rapa HOM05D006518 ORTHO05D008270 9.3e-72 274.2 227 64.8
Phvul.002G088300 Phaseolus vulgaris HOM05D006518 ORTHO05D008270 1.2e-71 273.9 218 65.6
MD16G1075600 Malus domestica HOM05D006518 ORTHO05D008270 1.6e-71 273.5 228 65.8
Psat2g127200 Pisum sativum HOM05D006518 ORTHO05D008270 1.6e-71 273.5 206 67.5
ATR0684G233 Amborella trichopoda HOM05D006518 ORTHO05D008270 2.1e-71 273.1 231 63.6
MD13G1074200 Malus domestica HOM05D006518 ORTHO05D008270 2.1e-71 273.1 241 63.1
HPP92_016855 Vanilla planifolia HOM05D006518 ORTHO05D008270 7.8e-71 271.2 205 65.9
vmacro01240 Vaccinium macrocarpon HOM05D006518 ORTHO05D008270 8.7e-70 267.7 194 68.6
Sabra10G0008100 Salix brachista HOM05D006518 ORTHO05D008270 1.5e-69 266.9 196 67.9
TWI18G0776 Tripterygium wilfordii HOM05D006518 ORTHO05D008270 1.9e-69 266.5 223 63.7
Os11g0602900 Oryza sativa ssp. japonica HOM05D006518 ORTHO05D008270 2.5e-69 266.2 213 64.8
Zm00001eb114970 Zea mays HOM05D006518 ORTHO05D008270 1.3e-68 263.8 222 64.0
Rhsim12G0061300 Rhododendron simsii HOM05D006518 ORTHO05D008270 2.8e-68 262.7 223 62.3
DCAR_031032 Daucus carota HOM05D006518 ORTHO05D008270 8.1e-68 261.2 195 68.7
Peaxi162Scf00026g00297 Petunia axillaris HOM05D006518 ORTHO05D008270 1.8e-67 260.0 270 56.7
Ciclev10032751m.g Citrus clementina HOM05D006518 ORTHO05D008270 1.3e-65 253.8 181 70.2
TAR374G0832 Trochodendron aralioides HOM05D006518 ORTHO05D008270 1.7e-65 253.4 199 66.3
FvH4_4g31590 Fragaria vesca HOM05D006518 ORTHO05D008270 2.2e-65 253.1 216 64.4
HanXRQChr17g0545181 Helianthus annuus HOM05D006518 ORTHO05D008270 2.4e-64 249.6 175 73.1
Migut.L01314 Erythranthe guttata HOM05D006518 ORTHO05D008270 3.2e-64 249.2 194 70.6
Pp3c22_14990 Physcomitrium patens HOM05D006518 ORTHO05D008270 2.3e-62 243.0 207 63.8
Mapoly0071s0062 Marchantia polymorpha HOM05D006518 ORTHO05D008270 1.2e-58 230.7 209 58.9
Haze_12032 Corylus avellana HOM05D006518 ORTHO05D008270 1.5e-58 230.3 275 50.9
AUR62005750 Chenopodium quinoa HOM05D006518 ORTHO05D008270 1.3e-57 227.3 164 69.5
SMO358G0251 Selaginella moellendorffii HOM05D006518 ORTHO05D008270 2.2e-57 226.5 196 62.8
AUR62028810 Chenopodium quinoa HOM05D006518 ORTHO05D008270 2.9e-57 226.1 164 69.5
Prupe.1G271800 Prunus persica HOM05D006518 ORTHO05D008270 7.1e-56 221.5 230 57.0
Hund25256 Selenicereus undatus HOM05D006518 ORTHO05D008270 1.6e-55 220.3 165 68.5
AagrBONN_evm.TU.Sc2ySwM_344.4129 Anthoceros agrestis HOM05D006518 ORTHO05D008270 1.0e-54 217.6 208 56.2
Haze_12039 Corylus avellana HOM05D006518 ORTHO05D008270 1.4e-51 207.2 158 66.5
Lj6A791G23 Lonicera japonica HOM05D006518 ORTHO05D008270 7.1e-48 194.9 235 49.8
Cpa.g.sc183.33 Carica papaya HOM05D006518 ORTHO05D008270 1.0e-46 191.0 100 88.0
Ah.03g135280 Amaranthus hybridus HOM05D006518 ORTHO05D008270 2.3e-46 189.9 106 83.0
Hma1.2p1_0598F.1_g186760 Hydrangea macrophylla HOM05D006518 ORTHO05D008270 2.3e-46 189.9 146 68.5
CDE09G0040 Ceratophyllum demersum HOM05D006518 ORTHO05D008270 7.4e-45 184.9 158 62.0
Glyma.01G044900 Glycine max HOM05D006518 ORTHO05D008270 9.6e-45 184.5 152 64.5
Cre06.g292500 Chlamydomonas reinhardtii HOM05D006518 ORTHO05D008270 2.9e-41 172.9 244 44.3
MCO05G545 Micromonas commoda HOM05D006518 ORTHO05D008270 1.4e-35 154.1 169 50.9
Sed0010295 Sechium edule HOM05D006518 ORTHO05D008270 8.5e-33 144.8 157 53.5
Zm00001eb044370 Zea mays HOM05D006518 ORTHO05D008270 2.3e-30 136.7 132 58.3
AL1G41130 Arabidopsis lyrata HOM05D006518 ORTHO05D008270 2.9e-25 119.8 98 67.3
PSO832G3732 Papaver somniferum HOM05D006518 ORTHO05D008270 7.2e-24 115.2 71 77.5
CARHR024980 Cardamine hirsuta HOM05D006518 ORTHO05D008270 1.2e-23 114.4 72 75.0
Zm00001eb428600 Zea mays HOM05D006518 ORTHO05D008270 2.7e-23 113.2 110 60.0
SalBow1G2824 Salvia bowleyana HOM05D006518 ORTHO05D008270 6.7e-22 108.6 159 44.7
Dinv24975 Davidia involucrata HOM05D006518 ORTHO05D008270 1.5e-16 90.9 55 76.4


User provided reference genes

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