Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01404 Striga asiatica HOM05D004153 ORTHO05D004678 1.7e-97 359.4 187 100.0
Oeu030970.1 Olea europaea HOM05D004153 ORTHO05D004678 8.8e-54 214.2 199 59.3
SalBow3G0249 Salvia bowleyana HOM05D004153 ORTHO05D004678 3.7e-52 208.8 153 68.6
Migut.D00197 Erythranthe guttata HOM05D004153 ORTHO05D004678 6.3e-52 208.0 193 59.6
Cc01_g20660 Coffea canephora HOM05D004153 ORTHO05D004678 2.0e-50 203.0 193 59.1
Peaxi162Scf00067g00254 Petunia axillaris HOM05D004153 ORTHO05D004678 4.2e-48 195.3 192 56.2
unitig_0.g1178 Utricularia gibba HOM05D004153 ORTHO05D004678 5.5e-48 194.9 195 56.9
Solyc09g074910.1 Solanum lycopersicum HOM05D004153 ORTHO05D004678 4.0e-46 188.7 200 54.0
Manes.05G063900 Manihot esculenta HOM05D004153 ORTHO05D004678 6.8e-46 188.0 195 49.7
CAN.G339.31 Capsicum annuum HOM05D004153 ORTHO05D004678 8.8e-46 187.6 192 53.1
Sopen09g029730 Solanum pennellii HOM05D004153 ORTHO05D004678 8.8e-46 187.6 200 54.0
Duzib138G0244 Durio zibethinus HOM05D004153 ORTHO05D004678 2.0e-45 186.4 197 51.3
Potri.002G206100 Populus trichocarpa HOM05D004153 ORTHO05D004678 1.7e-44 183.3 195 50.3
COL.COLO4_23373 Corchorus olitorius HOM05D004153 ORTHO05D004678 2.2e-44 183.0 190 50.0
Nitab4.5_0000619g0070 Nicotiana tabacum HOM05D004153 ORTHO05D004678 3.7e-44 182.2 198 52.5
PGSC0003DMG400035200 Solanum tuberosum HOM05D004153 ORTHO05D004678 4.9e-44 181.8 204 52.9
Gorai.008G011200 Gossypium raimondii HOM05D004153 ORTHO05D004678 2.4e-43 179.5 190 50.5
Nitab4.5_0003901g0020 Nicotiana tabacum HOM05D004153 ORTHO05D004678 2.4e-43 179.5 200 51.5
Sabra02G0153200 Salix brachista HOM05D004153 ORTHO05D004678 2.4e-43 179.5 195 50.3
Gohir.D12G011200 Gossypium hirsutum HOM05D004153 ORTHO05D004678 5.4e-43 178.3 189 49.2
Aqoxy2G02983 Aquilegia oxysepala HOM05D004153 ORTHO05D004678 7.0e-43 177.9 191 48.7
Manes.04G056100 Manihot esculenta HOM05D004153 ORTHO05D004678 7.0e-43 177.9 161 50.9
TWI23G0022 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 1.6e-42 176.8 195 49.2
Potri.014G131400 Populus trichocarpa HOM05D004153 ORTHO05D004678 3.5e-42 175.6 197 47.7
FAN15G0276 Fragaria x ananassa HOM05D004153 ORTHO05D004678 4.5e-42 175.3 193 48.2
FAN15G2246 Fragaria x ananassa HOM05D000802 ORTHO05D001074 3.8e-41 172.2 193 47.7
Atru.chr5.1180 Acer truncatum HOM05D004153 ORTHO05D004678 5.0e-41 171.8 197 46.2
Gohir.A12G010800 Gossypium hirsutum HOM05D004153 ORTHO05D004678 6.6e-41 171.4 190 50.0
FvH4_2g25400 Fragaria vesca HOM05D004153 ORTHO05D004678 8.6e-41 171.0 191 47.1
FAN24G2766 Fragaria x ananassa HOM05D004153 ORTHO05D004678 8.6e-41 171.0 191 47.1
Prupe.8G258500 Prunus persica HOM05D004153 ORTHO05D004678 1.5e-40 170.2 192 46.4
FAN27G1399 Fragaria x ananassa HOM05D004153 ORTHO05D004678 1.9e-40 169.9 191 47.1
TAR365G1014 Trochodendron aralioides HOM05D004153 ORTHO05D004678 1.9e-40 169.9 137 58.4
PGR119G1654 Punica granatum HOM05D004153 ORTHO05D004678 4.3e-40 168.7 188 50.5
PGR119G2063 Punica granatum HOM05D004153 ORTHO05D004678 4.3e-40 168.7 188 50.5
Nn4g25841 Nelumbo nucifera HOM05D004153 ORTHO05D004678 9.5e-40 167.5 192 51.0
Lj1g0005892 Lotus japonicus HOM05D004153 ORTHO05D004678 2.8e-39 166.0 178 48.9
MD03G1285300 Malus domestica HOM05D004153 ORTHO05D004678 3.6e-39 165.6 189 47.1
Hma1.2p1_0209F.1_g088580 Hydrangea macrophylla HOM05D004153 ORTHO05D004678 4.7e-39 165.2 154 51.9
QL12p027168 Quercus lobata HOM05D004153 ORTHO05D004678 8.0e-39 164.5 188 46.3
RcHm_v2.0_Chr6g0293581 Rosa chinensis HOM05D004153 ORTHO05D004678 2.3e-38 162.9 191 45.5
Phvul.001G205900 Phaseolus vulgaris HOM05D004153 ORTHO05D004678 8.9e-38 161.0 191 47.1
FAN20G2301 Fragaria x ananassa HOM05D004153 ORTHO05D004678 1.2e-37 160.6 191 45.5
Glyma.03G213300 Glycine max HOM05D004153 ORTHO05D004678 4.4e-37 158.7 190 48.9
Nn5g27910 Nelumbo nucifera HOM05D004153 ORTHO05D004678 5.7e-37 158.3 185 47.6
Lj1C0T8 Lonicera japonica HOM05D004153 ORTHO05D004678 7.5e-37 157.9 163 50.9
Cpa.g.sc9.210 Carica papaya HOM05D004153 ORTHO05D004678 3.7e-36 155.6 154 48.1
Lj3P816T18 Lonicera japonica HOM05D004153 ORTHO05D004678 3.7e-36 155.6 149 51.0
CiPaw.07G106600 Carya illinoinensis HOM05D004153 ORTHO05D004678 4.9e-36 155.2 190 44.2
DCAR_002817 Daucus carota HOM05D004153 ORTHO05D004678 8.3e-36 154.5 153 50.3
THA.LOC104802169 Tarenaya hassleriana HOM05D004153 ORTHO05D004678 3.2e-35 152.5 183 45.9
Lalb_Chr15g0078571 Lupinus albus HOM05D004153 ORTHO05D004678 4.1e-35 152.1 154 47.4
EL10Ac6g15659 Beta vulgaris HOM05D004153 ORTHO05D004678 5.4e-35 151.8 164 45.7
PSO017G2667 Papaver somniferum HOM05D004153 ORTHO05D004678 5.4e-35 151.8 190 42.1
Psat3g022920 Pisum sativum HOM05D004153 ORTHO05D004678 5.4e-35 151.8 166 47.6
AL4G47340 Arabidopsis lyrata HOM05D004153 ORTHO05D004678 7.0e-35 151.4 193 43.5
Lsat_1_v5_gn_5_190540 Lactuca sativa HOM05D004153 ORTHO05D004678 7.0e-35 151.4 146 48.6
PSO675G8366 Papaver somniferum HOM05D004153 ORTHO05D004678 7.0e-35 151.4 190 43.2
Ciclev10022120m.g Citrus clementina HOM05D004153 ORTHO05D004678 9.2e-35 151.0 195 44.6
VMungo1383G3271 Vigna mungo HOM05D004153 ORTHO05D004678 9.2e-35 151.0 190 44.7
MBI18_g21824_MAGBIO Magnolia biondii HOM05D004153 ORTHO05D004678 1.2e-34 150.6 187 45.5
AT2G47770 Arabidopsis thaliana HOM05D004153 ORTHO05D004678 3.5e-34 149.1 193 42.0
Thecc.01G297300 Theobroma cacao HOM05D004153 ORTHO05D004678 3.5e-34 149.1 194 42.3
Lalb_Chr18g0047121 Lupinus albus HOM05D004153 ORTHO05D004678 7.8e-34 147.9 203 43.8
Lsat_1_v5_gn_9_1141 Lactuca sativa HOM05D004153 ORTHO05D004678 1.3e-33 147.1 164 44.5
Carub.0004s3048 Capsella rubella HOM05D004153 ORTHO05D004678 1.7e-33 146.7 195 42.1
Cfa005949 Carpinus fangiana HOM05D004153 ORTHO05D004678 1.7e-33 146.7 116 56.9
arahy.Tifrunner.gnm1.ann1.3INE6D Arachis hypogaea HOM05D004153 ORTHO05D004678 2.3e-33 146.4 151 48.3
Lj3P819T20 Lonicera japonica HOM05D004153 ORTHO05D004678 2.3e-33 146.4 137 50.4
Haze_04898 Corylus avellana HOM05D004153 ORTHO05D004678 3.0e-33 146.0 189 45.5
CANSAT78G0904 Cannabis sativa HOM05D004153 ORTHO05D004678 5.0e-33 145.2 176 44.3
Ah.08g213200 Amaranthus hybridus HOM05D004153 ORTHO05D004678 6.6e-33 144.8 193 42.5
Ciclev10007035m.g Citrus clementina HOM05D004153 ORTHO05D004678 1.9e-32 143.3 189 41.3
CANSAT01G1893 Cannabis sativa HOM05D004153 ORTHO05D004678 5.6e-32 141.7 188 42.0
CARHR143140 Cardamine hirsuta HOM05D004153 ORTHO05D004678 7.3e-32 141.4 195 40.5
CSS0027100 Camellia sinensis var. sinensis HOM05D004153 ORTHO05D004678 1.6e-31 140.2 154 47.4
AUR62033157 Chenopodium quinoa HOM05D004153 ORTHO05D004678 2.1e-31 139.8 190 41.1
AUR62033169 Chenopodium quinoa HOM05D004153 ORTHO05D004678 2.1e-31 139.8 190 41.1
C04p00110 Brassica napus HOM05D004153 ORTHO05D004678 4.7e-31 138.7 185 41.1
BolC4t28778H Brassica oleracea HOM05D004153 ORTHO05D004678 4.7e-31 138.7 193 41.5
Sp4g29700 Schrenkiella parvula HOM05D004153 ORTHO05D004678 4.7e-31 138.7 195 41.5
Aa31LG1G29110 Aethionema arabicum HOM05D004153 ORTHO05D004678 6.2e-31 138.3 198 39.4
Prupe.1G136800 Prunus persica HOM05D004153 ORTHO05D004678 6.2e-31 138.3 144 45.1
Medtr7g108650 Medicago truncatula HOM05D004153 ORTHO05D004678 8.0e-31 137.9 193 42.5
BolC4t21658H Brassica oleracea HOM05D004153 ORTHO05D004678 1.4e-30 137.1 185 41.1
A04p35060 Brassica napus HOM05D004153 ORTHO05D004678 2.3e-30 136.3 195 40.5
BraA04t18942Z Brassica rapa HOM05D004153 ORTHO05D004678 3.1e-30 136.0 195 40.5
HPP92_016940 Vanilla planifolia HOM05D004153 ORTHO05D004678 3.1e-30 136.0 184 44.6
AUR62008617 Chenopodium quinoa HOM05D004153 ORTHO05D004678 4.0e-30 135.6 190 40.5
Haze_01203 Corylus avellana HOM05D004153 ORTHO05D004678 4.0e-30 135.6 151 45.7
Thhalv10001647m.g Eutrema salsugineum HOM05D004153 ORTHO05D004678 4.0e-30 135.6 194 40.2
BcaC02g06991 Brassica carinata HOM05D004153 ORTHO05D004678 5.2e-30 135.2 194 41.2
Atru.chr4.2837 Acer truncatum HOM05D004153 ORTHO05D004678 8.9e-30 134.4 172 41.3
RcHm_v2.0_Chr4g0422241 Rosa chinensis HOM05D004153 ORTHO05D004678 1.2e-29 134.0 193 41.5
Thecc.04G284700 Theobroma cacao HOM05D004153 ORTHO05D004678 1.2e-29 134.0 171 42.1
C04p72970 Brassica napus HOM05D004153 ORTHO05D004678 1.5e-29 133.7 194 40.7
HanXRQChr01g0001291 Helianthus annuus HOM05D004153 ORTHO05D004678 2.6e-29 132.9 168 45.8
HanXRQChr10g0284631 Helianthus annuus HOM05D004153 ORTHO05D004678 2.6e-29 132.9 162 39.5
ClCG09G006030 Citrullus lanatus HOM05D004153 ORTHO05D004678 4.4e-29 132.1 192 40.6
BcaB06g29496 Brassica carinata HOM05D004153 ORTHO05D004678 9.8e-29 131.0 148 44.6
BcaC02g12543 Brassica carinata HOM05D004153 ORTHO05D004678 9.8e-29 131.0 185 40.0
Duzib052G0234 Durio zibethinus HOM05D004153 ORTHO05D004678 1.3e-28 130.6 190 38.4
TWI53G1241 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 3.7e-28 129.0 167 40.7
FAN07G0961 Fragaria x ananassa HOM05D004153 ORTHO05D004678 4.9e-28 128.6 183 40.4
Sed0018454 Sechium edule HOM05D004153 ORTHO05D004678 4.9e-28 128.6 157 46.5
EL10Ac3g06596 Beta vulgaris HOM05D004153 ORTHO05D004678 3.2e-27 125.9 191 39.8
BcaB06g29494 Brassica carinata HOM05D004153 ORTHO05D004678 3.2e-27 125.9 195 37.9
BcaB06g29497 Brassica carinata HOM05D004153 ORTHO05D004678 3.2e-27 125.9 195 37.9
TWI73G1192 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 4.1e-27 125.6 161 42.2
Glyma.09G044900 Glycine max HOM05D004153 ORTHO05D004678 5.4e-27 125.2 150 41.3
MD11G1304700 Malus domestica HOM05D004153 ORTHO05D004678 5.4e-27 125.2 103 54.4
VMungo1309G0390 Vigna mungo HOM05D004153 ORTHO05D004678 5.4e-27 125.2 149 43.6
MELO3C006663.2 Cucumis melo HOM05D004153 ORTHO05D004678 2.0e-26 123.2 164 40.9
Gohir.A10G164100 Gossypium hirsutum HOM05D004153 ORTHO05D004678 2.0e-26 123.2 191 36.6
Lj6g0000547 Lotus japonicus HOM05D004153 ORTHO05D004678 2.0e-26 123.2 150 43.3
Eucgr.B01312 Eucalyptus grandis HOM05D004153 ORTHO05D004678 2.7e-26 122.9 165 35.8
Gohir.D10G170400 Gossypium hirsutum HOM05D004153 ORTHO05D004678 2.7e-26 122.9 191 36.6
Rhsim04G0221600 Rhododendron simsii HOM05D004153 ORTHO05D004678 6.0e-26 121.7 155 43.9
Glyma.15G147800 Glycine max HOM05D004153 ORTHO05D004678 7.8e-26 121.3 150 39.3
PGR031G1230 Punica granatum HOM05D004153 ORTHO05D004678 7.8e-26 121.3 167 38.3
CsaV3_3G014620 Cucumis sativus L. HOM05D004153 ORTHO05D004678 1.0e-25 120.9 167 39.5
Rhsim01G0283900 Rhododendron simsii HOM05D004153 ORTHO05D004678 1.0e-25 120.9 176 40.9
Psat1g153880 Pisum sativum HOM05D004153 ORTHO05D004678 1.7e-25 120.2 154 41.6
Sed0010104 Sechium edule HOM05D004153 ORTHO05D004678 1.7e-25 120.2 162 40.7
Phvul.009G248000 Phaseolus vulgaris HOM05D004153 ORTHO05D004678 2.3e-25 119.8 149 40.9
TPR.G13834 Trifolium pratense HOM05D004153 ORTHO05D004678 3.9e-25 119.0 149 39.6
Gorai.011G190200 Gossypium raimondii HOM05D004153 ORTHO05D004678 5.0e-25 118.6 191 36.1
Sed0026977 Sechium edule HOM05D004153 ORTHO05D004678 6.6e-25 118.2 189 38.6
BraA05t19015Z Brassica rapa HOM05D004153 ORTHO05D004678 8.6e-25 117.9 186 39.2
A05p00190 Brassica napus HOM05D004153 ORTHO05D004678 1.9e-24 116.7 186 39.2
ATR0796G004 Amborella trichopoda HOM05D004153 ORTHO05D004678 5.6e-24 115.2 163 39.3
Sc13g0003480 Simmondsia chinensis HOM05D004153 ORTHO05D004678 5.6e-24 115.2 154 40.3
Actinidia24837 Actinidia chinensis HOM05D004153 ORTHO05D004678 7.3e-24 114.8 111 47.7
Potri.010G025200 Populus trichocarpa HOM05D004153 ORTHO05D004678 2.1e-23 113.2 189 37.0
Lalb_Chr18g0051691 Lupinus albus HOM05D004153 ORTHO05D004678 2.8e-23 112.8 153 41.2
CsaV3_7G029110 Cucumis sativus L. HOM05D004153 ORTHO05D004678 1.1e-22 110.9 119 44.5
MELO3C016017.2 Cucumis melo HOM05D004153 ORTHO05D004678 2.3e-22 109.8 190 38.9
Medtr2g436790 Medicago truncatula HOM05D004153 ORTHO05D004678 2.9e-20 102.8 150 36.7
Manes.03G195100 Manihot esculenta HOM05D004153 ORTHO05D004678 4.9e-20 102.1 177 36.2
BcaB02g08747 Brassica carinata HOM05D004153 ORTHO05D004678 1.4e-19 100.5 185 35.1
CDE02G0764 Ceratophyllum demersum HOM05D004153 ORTHO05D004678 4.1e-19 99.0 143 40.6
Sabra10G0013900 Salix brachista HOM05D004153 ORTHO05D004678 6.0e-18 95.1 160 40.0
Zm00001eb354150 Zea mays HOM05D004153 ORTHO05D004678 1.7e-17 93.6 102 44.1
Ca_01937_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 1.1e-16 90.9 103 42.7
Os05g0151200 Oryza sativa ssp. japonica HOM05D004153 ORTHO05D004678 1.9e-16 90.1 101 41.6
Lj1C32T8 Lonicera japonica HOM05D004153 ORTHO05D004678 2.3e-14 83.2 187 35.3
CBR_g30074 Chara braunii HOM05D004153 ORTHO05D004678 6.8e-14 81.6 143 35.0
SEGI_18828 Sequoiadendron giganteum HOM05D004153 ORTHO05D004678 2.6e-13 79.7 174 32.8
AagrBONN_evm.TU.Sc2ySwM_362.296 Anthoceros agrestis HOM05D004153 ORTHO05D004678 7.6e-13 78.2 163 31.9
Actinidia21057 Actinidia chinensis HOM05D004153 ORTHO05D004678 1.4e-11 73.9 118 37.3
Pp3c24_14170 Physcomitrium patens HOM05D004153 ORTHO05D004678 5.4e-11 72.0 154 35.1
Dinv19716 Davidia involucrata HOM05D004153 ORTHO05D004678 2.1e-10 70.1 182 33.0
SMO115G0169 Selaginella moellendorffii HOM05D004153 ORTHO05D004678 2.7e-10 69.7 127 34.6
Mapoly0050s0023 Marchantia polymorpha HOM05D004153 ORTHO05D004678 6.0e-10 68.6 191 33.0
SMO144G0096 Selaginella moellendorffii HOM05D004153 ORTHO05D004678 6.6e-09 65.1 117 31.6
Pp3c26_2060 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.5e-08 63.9 117 35.0
Pp3c2_17540 Physcomitrium patens HOM05D004153 ORTHO05D004678 7.3e-08 61.6 196 32.7
Pp3c4_22190 Physcomitrium patens HOM05D004153 ORTHO05D004678 7.3e-08 61.6 117 33.3
Rhsim09G0027200 Rhododendron simsii HOM05D041434 ORTHO05D004678 9.6e-08 61.2 153 34.6
AagrBONN_evm.TU.Sc2ySwM_117.3397 Anthoceros agrestis HOM05D004153 ORTHO05D004678 2.1e-07 60.1 135 31.1
Mapoly0003s0268 Marchantia polymorpha HOM05D004153 ORTHO05D004678 2.8e-07 59.7 149 27.5
ECA248G0131 Erigeron canadensis HOM05D004153 ORTHO05D004678 4.7e-07 58.9 99 38.4
Pp3c10_6760 Physcomitrium patens HOM05D004153 ORTHO05D004678 3.1e-06 56.2 195 29.7


User provided reference genes

Program Settings