Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 6.9e-226 786.9 393 100.0
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 2.0e-169 599.4 390 78.5
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.0e-168 597.0 393 77.9
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 6.8e-165 584.3 385 75.3
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.3e-163 580.1 384 71.9
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 3.9e-160 568.5 371 77.6
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 6.2e-158 561.2 394 68.5
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 4.0e-157 558.5 386 68.4
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.2e-157 558.1 386 69.7
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 1.5e-156 556.6 386 68.4
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 1.5e-156 556.6 394 70.6
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.0e-156 556.2 392 66.8
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.6e-156 555.8 386 69.4
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 4.4e-156 555.1 390 70.3
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 6.4e-155 551.2 387 68.7
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.9e-154 549.7 392 66.6
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.4e-154 549.3 384 68.0
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 3.2e-154 548.9 389 68.4
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.6e-153 546.6 388 68.3
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 2.7e-153 545.8 389 66.3
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 4.6e-153 545.0 390 68.2
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 4.6e-153 545.0 389 67.1
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 6.0e-153 544.7 389 66.3
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.0e-152 543.9 393 66.4
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.0e-152 543.9 392 67.6
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.7e-152 543.1 390 67.9
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.7e-152 543.1 389 67.1
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 2.3e-152 542.7 394 66.0
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 8.6e-152 540.8 391 65.5
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.5e-151 540.0 391 66.2
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.5e-151 540.0 390 67.9
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.5e-151 539.3 386 70.5
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 2.5e-151 539.3 379 66.5
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 2.5e-151 539.3 397 65.2
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 3.3e-151 538.9 391 70.8
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 5.6e-151 538.1 391 69.8
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 1.2e-150 537.0 389 65.3
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 2.1e-150 536.2 418 63.9
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 8.1e-150 534.3 396 64.4
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 8.1e-150 534.3 384 65.1
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 8.1e-150 534.3 384 65.1
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 1.1e-149 533.9 443 60.7
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.5e-148 530.0 387 69.5
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 3.8e-147 525.4 387 65.9
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 4.9e-147 525.0 376 66.2
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 2.4e-146 522.7 395 64.8
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 6.0e-145 518.1 378 68.0
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 7.8e-145 517.7 376 68.1
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.0e-144 517.3 442 59.0
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 3.9e-144 515.4 395 63.8
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 6.6e-144 514.6 392 67.6
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 6.6e-144 514.6 423 65.7
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.5e-143 512.7 392 64.5
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 3.3e-143 512.3 395 66.3
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 5.6e-143 511.5 388 63.9
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 3.6e-142 508.8 388 62.1
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 4.8e-142 508.4 372 64.2
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 6.2e-142 508.1 388 63.1
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 6.2e-142 508.1 389 64.3
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.8e-141 506.5 392 67.9
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 6.9e-141 504.6 390 62.8
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.5e-140 503.4 392 62.2
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 3.4e-140 502.3 388 61.6
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 8.4e-139 497.7 341 68.0
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 2.4e-138 496.1 393 66.4
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 9.3e-138 494.2 389 66.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 9.3e-138 494.2 397 62.2
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 3.5e-137 492.3 391 61.6
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 6.0e-137 491.5 395 62.3
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 2.3e-136 489.6 396 64.6
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.3e-136 489.6 396 61.9
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 3.0e-136 489.2 338 69.8
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.1e-135 487.3 427 60.7
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.1e-135 487.3 364 63.7
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.1e-135 487.3 416 60.6
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 2.8e-134 482.6 392 61.5
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.8e-133 479.9 387 61.2
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 2.4e-133 479.6 317 72.9
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 3.1e-133 479.2 389 61.7
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.1e-133 479.2 388 59.5
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 9.0e-133 477.6 392 63.8
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.2e-131 473.0 399 62.9
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 3.8e-131 472.2 391 60.4
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 6.4e-131 471.5 389 59.4
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 2.1e-129 466.5 389 63.2
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.3e-128 463.8 388 62.6
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 3.0e-128 462.6 384 58.9
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 7.4e-127 458.0 409 59.9
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.1e-126 456.4 368 60.9
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 3.7e-126 455.7 340 67.6
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 6.2e-126 454.9 388 61.1
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.1e-125 454.1 388 58.0
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.1e-125 452.6 384 58.6
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 3.1e-125 452.6 393 60.1
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.2e-124 450.7 384 58.3
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 4.5e-124 448.7 388 61.3
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 5.8e-124 448.4 389 62.5
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 1.0e-123 447.6 388 61.3
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 3.8e-123 445.7 389 58.4
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 6.5e-123 444.9 390 62.1
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 3.2e-122 442.6 388 61.3
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 9.6e-119 431.0 384 57.3
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 2.1e-113 413.3 400 55.8
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.4e-109 400.6 382 52.1
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 4.1e-109 399.1 387 54.3
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 2.2e-107 393.3 266 76.7
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.9e-107 392.9 302 61.9
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 3.1e-101 372.9 277 70.4
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 3.1e-93 346.3 232 70.3
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.8e-85 320.5 384 47.7
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.5e-82 310.8 385 46.5
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.5e-82 310.8 348 51.1
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 3.6e-81 306.2 389 42.9
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 2.4e-77 293.5 286 53.1
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.2e-76 291.2 222 65.8
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 6.5e-75 285.4 200 66.0
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.0e-67 259.2 317 46.4
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.2e-63 248.1 298 44.3
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 8.6e-59 231.9 172 68.6
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 4.7e-57 226.1 194 56.2
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 6.0e-52 209.1 152 61.2
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.7e-51 207.6 255 44.3
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 2.5e-50 203.8 188 59.6
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 6.0e-44 182.6 386 33.2
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.5e-39 167.9 136 64.0
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 1.7e-35 154.5 122 63.9
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.1e-33 147.5 380 31.8
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 3.0e-27 127.1 331 30.5
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 7.3e-26 122.5 175 45.1
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 4.2e-21 106.7 66 77.3
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 3.5e-20 103.6 155 39.4
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 6.0e-12 76.3 222 28.8
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 7.9e-12 75.9 69 47.8
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 1.2e-07 62.0 81 48.1
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 4.5e-07 60.1 43 65.1


User provided reference genes

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