Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 9.7e-50 199.9 105 100.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.7e-41 172.6 105 84.8
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.7e-41 171.4 103 85.4
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 6.3e-41 170.6 105 83.8
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.3e-40 167.5 104 83.7
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.0e-38 163.3 104 79.8
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.4e-37 159.5 101 83.2
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 4.2e-37 157.9 101 81.2
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 1.6e-36 156.0 103 78.6
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.1e-36 155.6 104 74.0
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 7.9e-36 153.7 101 76.2
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.0e-35 153.3 105 78.1
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.0e-35 153.3 101 75.2
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 1.0e-35 153.3 102 76.5
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 1.8e-35 152.5 102 77.5
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 2.3e-35 152.1 105 74.3
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.0e-35 151.8 102 75.5
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.0e-35 151.8 105 76.2
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 3.9e-35 151.4 102 75.5
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 6.7e-35 150.6 99 75.8
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 6.7e-35 150.6 104 72.1
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 8.8e-35 150.2 100 77.0
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 8.8e-35 150.2 102 76.5
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.1e-34 149.8 102 74.5
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.0e-34 149.1 105 74.3
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 2.6e-34 148.7 100 74.0
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 4.4e-34 147.9 105 73.3
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 4.4e-34 147.9 104 70.2
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 5.7e-34 147.5 101 76.2
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 7.4e-34 147.1 102 76.5
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 9.7e-34 146.7 100 76.0
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 9.7e-34 146.7 100 76.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.3e-33 146.4 101 73.3
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.3e-33 146.4 101 73.3
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.3e-33 146.4 101 73.3
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.3e-33 146.4 101 73.3
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.3e-33 146.4 105 71.4
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.3e-33 146.4 103 72.8
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.7e-33 146.0 103 69.9
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.7e-33 146.0 99 74.7
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.7e-33 146.0 102 72.5
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.7e-33 146.0 103 70.9
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 2.2e-33 145.6 99 74.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 2.2e-33 145.6 103 69.9
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.2e-33 145.6 102 72.5
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.2e-33 145.6 101 76.2
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 2.8e-33 145.2 103 71.8
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.8e-33 145.2 105 70.5
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.8e-33 145.2 100 75.0
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.8e-33 145.2 100 75.0
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 3.7e-33 144.8 101 72.3
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 4.8e-33 144.4 96 78.1
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 6.3e-33 144.1 101 74.3
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.1e-32 143.3 101 71.3
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.4e-32 142.9 100 74.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.4e-32 142.9 102 73.5
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.4e-32 142.9 102 72.5
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.8e-32 142.5 103 69.9
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.4e-32 142.1 98 73.5
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.4e-32 142.1 118 68.6
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 2.4e-32 142.1 101 73.3
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 2.4e-32 142.1 101 71.3
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 7.0e-32 140.6 101 71.3
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 7.0e-32 140.6 101 71.3
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 7.0e-32 140.6 98 72.4
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 7.0e-32 140.6 98 72.4
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 71.6
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 9.1e-32 140.2 98 73.5
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 71.6
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 71.6
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.2e-31 139.8 101 70.3
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 71.6
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.6e-31 139.4 102 70.6
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.6e-31 139.4 100 72.0
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 2.6e-31 138.7 98 74.5
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 2.6e-31 138.7 101 69.3
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 3.5e-31 138.3 102 70.6
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 4.5e-31 137.9 103 69.9
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.0e-30 136.7 102 66.7
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 1.7e-30 136.0 101 68.3
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 5.0e-30 134.4 98 72.4
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 5.0e-30 134.4 103 68.0
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 5.0e-30 134.4 103 68.9
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 6.5e-30 134.0 103 68.0
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 8.5e-30 133.7 101 69.3
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.1e-29 133.3 106 66.0
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.2e-29 131.7 103 68.0
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.2e-29 131.3 84 82.1
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 5.5e-29 131.0 103 66.0
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 7.2e-29 130.6 101 67.3
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 7.2e-29 130.6 101 67.3
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 7.2e-29 130.6 82 85.4
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.2e-28 129.8 103 66.0
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 1.2e-28 129.8 103 65.0
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.6e-28 129.4 103 69.9
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 2.1e-28 129.0 103 66.0
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 3.6e-28 128.3 103 66.0
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 1.8e-27 125.9 155 52.9
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 2.3e-27 125.6 105 60.0
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 9.7e-26 120.2 103 61.2
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 2.2e-25 119.0 96 62.5
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.1e-24 116.7 103 60.2
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.1e-24 115.2 76 77.6
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.6e-23 112.8 78 73.1
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.6e-23 112.8 101 59.4
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 2.7e-23 112.1 79 73.4
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.0e-22 110.2 101 58.4
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 2.9e-22 108.6 105 52.4
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.9e-21 105.9 74 74.3
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.9e-21 105.9 76 72.4
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.9e-21 105.9 85 64.7
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.2e-21 105.1 81 64.2
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 4.2e-21 104.8 77 68.8
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.6e-20 102.8 179 38.0
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.7e-20 102.1 79 68.4
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 2.7e-20 102.1 78 69.2
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 4.4e-18 94.7 102 52.0
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.3e-17 93.2 79 60.8
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 1.7e-17 92.8 75 62.7
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 5.4e-16 87.8 100 48.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 2.2e-14 82.4 90 47.8
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 1.5e-13 79.7 72 59.7
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 1.5e-13 79.7 72 59.7
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.5e-10 69.7 54 72.2
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.3e-09 66.6 97 41.2
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 2.4e-08 62.4 50 60.0
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 1.0e-06 57.0 89 37.1
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 6.6e-06 54.3 89 37.1


User provided reference genes

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