Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 1.6e-307 1058.5 516 100.0
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 9.3e-255 883.2 522 83.9
SGA_v2.0_scaffold85G26692 Striga asiatica HOM05D003877 ORTHO05D004647 4.5e-249 864.4 502 85.3
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 8.2e-219 763.8 478 77.2
MSTRG.8927 Avicennia marina HOM05D003877 ORTHO05D004647 5.3e-218 761.1 482 76.6
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 2.0e-204 716.1 479 72.0
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 4.4e-204 714.9 485 70.3
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 4.1e-202 708.4 470 70.9
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 1.2e-201 706.8 470 71.9
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.7e-201 705.7 485 70.7
SalBow3G1521 Salvia bowleyana HOM05D003877 ORTHO05D004647 3.5e-201 705.3 617 59.3
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 1.1e-199 700.3 483 68.9
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 1.0e-197 693.7 491 68.8
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 1.4e-197 693.3 484 68.0
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 4.0e-197 691.8 467 70.4
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 8.9e-197 690.6 476 68.5
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 1.5e-196 689.9 470 70.6
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 3.4e-196 688.7 481 69.2
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 4.4e-196 688.3 483 68.7
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 1.3e-195 686.8 509 66.2
Glyma.18G024700 Glycine max HOM05D003877 ORTHO05D004647 2.9e-195 685.6 473 68.5
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 2.9e-195 685.6 476 68.1
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 2.9e-195 685.6 471 68.6
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 3.7e-195 685.3 476 69.7
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 3.7e-195 685.3 472 69.1
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 4.9e-195 684.9 462 69.5
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 1.4e-194 683.3 479 67.2
PGSC0003DMG400030038 Solanum tuberosum HOM05D003877 ORTHO05D004647 2.4e-194 682.6 479 68.3
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 4.1e-194 681.8 464 70.7
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 7.0e-194 681.0 461 69.4
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 1.6e-193 679.9 475 66.9
Sopen06g016790 Solanum pennellii HOM05D003877 ORTHO05D004647 2.0e-193 679.5 465 69.5
Solyc06g050990.3 Solanum lycopersicum HOM05D003877 ORTHO05D004647 4.6e-193 678.3 465 69.2
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 1.3e-192 676.8 471 67.9
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 2.3e-192 676.0 467 67.5
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 3.9e-192 675.2 462 68.2
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 3.9e-192 675.2 471 67.5
ECA233G0637 Erigeron canadensis HOM05D003877 ORTHO05D004647 5.0e-192 674.9 461 69.4
Cpa.g.sc19.135 Carica papaya HOM05D003877 ORTHO05D004647 1.5e-191 673.3 455 68.6
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 2.5e-191 672.5 455 69.7
Lalb_Chr08g0231521 Lupinus albus HOM05D003877 ORTHO05D004647 2.1e-190 669.5 450 70.2
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 2.8e-190 669.1 509 65.0
Phvul.006G048800 Phaseolus vulgaris HOM05D003877 ORTHO05D004647 2.8e-190 669.1 466 68.5
Potri.008G072600 Populus trichocarpa HOM05D003877 ORTHO05D004647 2.8e-190 669.1 472 68.4
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 2.8e-190 669.1 470 67.0
Duzib106G1591 Durio zibethinus HOM05D003877 ORTHO05D004647 6.2e-190 667.9 476 66.2
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.8e-189 666.4 502 65.1
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 1.2e-188 663.7 463 66.7
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 1.5e-188 663.3 446 69.5
QL08p063706 Quercus lobata HOM05D003877 ORTHO05D004647 3.4e-188 662.1 464 67.5
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 4.4e-188 661.8 482 66.6
CiPaw.02G195400 Carya illinoinensis HOM05D003877 ORTHO05D004647 5.8e-188 661.4 479 66.0
Lalb_Chr23g0277091 Lupinus albus HOM05D003877 ORTHO05D004647 5.8e-188 661.4 486 65.4
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 5.8e-188 661.4 469 66.3
arahy.Tifrunner.gnm1.ann1.EHZF9M Arachis hypogaea HOM05D003877 ORTHO05D004647 2.2e-187 659.4 462 66.5
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 2.2e-187 659.4 476 66.6
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 2.9e-187 659.1 470 67.0
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 2.9e-187 659.1 470 67.0
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 2.9e-187 659.1 461 65.5
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 2.9e-187 659.1 477 66.2
Manes.07G134500 Manihot esculenta HOM05D003877 ORTHO05D004647 3.7e-187 658.7 469 67.2
Prupe.2G255400 Prunus persica HOM05D003877 ORTHO05D004647 3.7e-187 658.7 469 67.8
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 4.9e-187 658.3 477 63.9
CANSAT56G2949 Cannabis sativa HOM05D003877 ORTHO05D004647 8.3e-187 657.5 469 66.3
Dinv21772 Davidia involucrata HOM05D003877 ORTHO05D004647 1.1e-186 657.1 421 75.1
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 1.1e-186 657.1 459 67.8
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.9e-186 656.4 476 65.8
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 4.1e-186 655.2 475 65.7
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 5.4e-186 654.8 477 63.7
Potri.010G184600 Populus trichocarpa HOM05D003877 ORTHO05D004647 5.4e-186 654.8 475 65.5
arahy.Tifrunner.gnm1.ann1.ZCM4RK Arachis hypogaea HOM05D003877 ORTHO05D004647 1.6e-185 653.3 467 65.7
Haze_17269 Corylus avellana HOM05D003877 ORTHO05D004647 2.7e-185 652.5 444 67.8
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 3.5e-185 652.1 565 58.1
arahy.Tifrunner.gnm1.ann1.EJG72V Arachis hypogaea HOM05D003877 ORTHO05D004647 1.3e-184 650.2 467 65.3
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.3e-184 650.2 471 65.4
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 3.9e-184 648.7 472 65.5
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.1e-183 647.1 480 63.5
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.9e-183 646.4 482 62.9
Gohir.D04G070400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 3.6e-182 642.1 459 65.8
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 6.2e-182 641.3 486 65.2
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 8.1e-182 641.0 468 63.9
THA.LOC104824338 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 6.8e-181 637.9 458 64.0
Sc11g0005270 Simmondsia chinensis HOM05D003877 ORTHO05D004647 1.2e-180 637.1 459 65.4
CSS0004354 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.5e-180 636.7 415 72.5
Carub.0001s0925 Capsella rubella HOM05D003877 ORTHO05D004647 7.5e-180 634.4 472 64.0
CARHR009900 Cardamine hirsuta HOM05D003877 ORTHO05D004647 2.9e-179 632.5 473 63.4
Hund13891 Selenicereus undatus HOM05D003877 ORTHO05D004647 6.4e-179 631.3 454 65.2
Thhalv10007485m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 1.1e-178 630.6 477 61.6
AL1G20470 Arabidopsis lyrata HOM05D003877 ORTHO05D004647 1.9e-178 629.8 472 63.6
AT1G09870 Arabidopsis thaliana HOM05D003877 ORTHO05D004647 1.9e-178 629.8 472 63.3
Hund15887 Selenicereus undatus HOM05D003877 ORTHO05D004647 1.9e-178 629.8 455 64.2
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 2.4e-178 629.4 489 62.2
Sabra10G0141800 Salix brachista HOM05D003877 ORTHO05D004647 2.4e-178 629.4 508 60.0
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 7.1e-178 627.9 453 64.9
Sp1g08500 Schrenkiella parvula HOM05D003877 ORTHO05D004647 9.2e-178 627.5 469 63.3
AUR62022935 Chenopodium quinoa HOM05D003877 ORTHO05D004647 2.7e-177 625.9 454 64.5
Sed0008918 Sechium edule HOM05D003877 ORTHO05D004647 1.7e-176 623.2 482 62.7
CSS0043221 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 3.9e-176 622.1 399 73.7
AUR62012296 Chenopodium quinoa HOM05D003877 ORTHO05D004647 5.1e-176 621.7 454 64.3
CSS0044757 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.5e-175 620.2 385 75.8
Sabra08G0053900 Salix brachista HOM05D003877 ORTHO05D004647 2.5e-175 619.4 516 60.5
PGSC0003DMG400027120 Solanum tuberosum HOM05D003877 ORTHO05D004647 3.3e-175 619.0 420 71.7
BraA09t41875Z Brassica rapa HOM05D003877 ORTHO05D004647 4.3e-175 618.6 460 63.7
A09p65300 Brassica napus HOM05D003877 ORTHO05D004647 7.3e-175 617.8 460 63.7
BraA06t23872Z Brassica rapa HOM05D003877 ORTHO05D004647 9.5e-175 617.5 475 62.1
BcaC07g41857 Brassica carinata HOM05D003877 ORTHO05D004647 1.2e-174 617.1 464 63.8
C08p49240 Brassica napus HOM05D003877 ORTHO05D004647 1.2e-174 617.1 464 63.8
BolC8t52459H Brassica oleracea HOM05D003877 ORTHO05D004647 1.2e-174 617.1 464 63.8
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 1.1e-173 614.0 485 60.6
CsaV3_5G010390 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.2e-172 610.5 443 65.9
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.5e-172 610.1 459 63.4
A06p06580 Brassica napus HOM05D003877 ORTHO05D004647 2.0e-172 609.8 475 61.5
BolC5t29551H Brassica oleracea HOM05D003877 ORTHO05D004647 4.4e-172 608.6 485 60.4
Aa31LG1G5020 Aethionema arabicum HOM05D003877 ORTHO05D004647 2.2e-171 606.3 471 61.1
C05p07990 Brassica napus HOM05D003877 ORTHO05D004647 2.9e-171 605.9 485 60.2
PSO349G0168 Papaver somniferum HOM05D003877 ORTHO05D004647 1.9e-170 603.2 463 61.6
MELO3C018375.2 Cucumis melo HOM05D003877 ORTHO05D004647 5.4e-170 601.7 459 63.2
BcaC05g24837 Brassica carinata HOM05D003877 ORTHO05D004647 9.2e-170 600.9 469 61.4
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 1.0e-168 597.4 475 62.1
Os03g0818100 Oryza sativa ssp. japonica HOM05D003877 ORTHO05D004647 5.1e-168 595.1 500 59.4
CDE04G1002 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 1.1e-167 594.0 473 60.9
PSO339G0345 Papaver somniferum HOM05D003877 ORTHO05D004647 5.6e-167 591.7 450 62.0
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 1.1e-165 587.4 487 59.5
Lsat_1_v5_gn_9_60880 Lactuca sativa HOM05D003877 ORTHO05D004647 1.8e-165 586.6 425 66.4
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 5.2e-165 585.1 576 51.2
Zm00001eb062330 Zea mays HOM05D003877 ORTHO05D004647 1.2e-164 583.9 491 59.5
Prupe.6G130900 Prunus persica HOM05D003877 ORTHO05D004647 2.6e-164 582.8 481 60.7
ClCG07G004500 Citrullus lanatus HOM05D003877 ORTHO05D004647 2.2e-163 579.7 432 63.2
Sed0009338 Sechium edule HOM05D003877 ORTHO05D004647 1.4e-162 577.0 440 63.0
MELO3C034227.2 Cucumis melo HOM05D003877 ORTHO05D004647 4.3e-159 565.5 473 58.8
ATR0681G014 Amborella trichopoda HOM05D003877 ORTHO05D004647 1.3e-158 563.9 433 63.3
Thhalv10002208m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 6.9e-157 558.1 417 62.8
CsaV3_5G010430 Cucumis sativus L. HOM05D003877 ORTHO05D004647 3.2e-154 549.3 476 57.8
Atru.chr12.96 Acer truncatum HOM05D003877 ORTHO05D004647 4.6e-153 545.4 418 62.9
CsaV3_5G010400 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.4e-138 497.3 465 55.3
CSS0003433 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.0e-136 491.1 363 66.9
Solyc05g052480.4 Solanum lycopersicum HOM05D003877 ORTHO05D004647 1.1e-135 487.6 331 71.9
Pp3c24_6790 Physcomitrium patens HOM05D003877 ORTHO05D004647 9.7e-135 484.6 471 49.0
Mapoly0029s0098 Marchantia polymorpha HOM05D003877 ORTHO05D004647 2.2e-134 483.4 469 50.3
SMO271G0017 Selaginella moellendorffii HOM05D003877 ORTHO05D004647 2.7e-129 466.5 475 49.3
CDE06G2086 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 2.5e-127 459.9 440 53.6
Pp3c8_15050 Physcomitrium patens HOM05D003877 ORTHO05D004647 3.3e-127 459.5 402 52.7
SalBow3G0419 Salvia bowleyana HOM05D003877 ORTHO05D004647 2.6e-124 449.9 270 80.0
AagrBONN_evm.TU.Sc2ySwM_344.2788 Anthoceros agrestis HOM05D003877 ORTHO05D004647 8.5e-115 418.3 532 43.0
HPP92_019712 Vanilla planifolia HOM05D003877 ORTHO05D004647 2.9e-107 393.3 304 61.8
unitig_8.g4098 Utricularia gibba HOM05D003877 ORTHO05D004647 3.1e-93 346.7 296 58.4
SalBow3G3178 Salvia bowleyana HOM05D003877 ORTHO05D004647 2.4e-85 320.5 192 77.1
SGA_v2.0_scaffold85G26702 Striga asiatica HOM05D003877 ORTHO05D004647 4.1e-85 319.7 217 76.0
CsaV3_2G012250 Cucumis sativus L. HOM05D003877 ORTHO05D004647 8.9e-64 248.8 207 58.0
SEGI_29662 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 1.6e-49 201.4 149 63.1
CBR_g38028 Chara braunii HOM05D003877 ORTHO05D004647 5.4e-45 186.4 317 36.6
Manes.09G077219 Manihot esculenta HOM05D003877 ORTHO05D004647 2.4e-40 171.0 101 78.2
Cre13.g568600 Chlamydomonas reinhardtii HOM05D003877 ORTHO05D004647 3.2e-37 160.6 446 29.4
TPR.G10202 Trifolium pratense HOM05D003877 ORTHO05D004647 7.9e-36 156.0 106 68.9
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 2.8e-33 147.5 149 53.7
unitig_8.g4097 Utricularia gibba HOM05D003877 ORTHO05D004647 2.8e-33 147.5 97 70.1
Lsat_1_v5_gn_5_175980 Lactuca sativa HOM05D003877 ORTHO05D004647 5.3e-32 143.3 110 61.8
Manes.18G042850 Manihot esculenta HOM05D003877 ORTHO05D004647 2.0e-31 141.4 112 64.3
Manes.06G044901 Manihot esculenta HOM05D003877 ORTHO05D004647 2.6e-31 141.0 112 64.3
CsaV3_2G012240 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.8e-27 128.3 86 67.4
SEGI_27537 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 2.6e-23 114.4 78 66.7
Nn5g28638 Nelumbo nucifera HOM05D003877 ORTHO05D004647 2.1e-20 104.8 70 70.0
TPR.G5082 Trifolium pratense HOM05D003877 ORTHO05D004647 7.9e-20 102.8 79 58.2
CSS0015783 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.3e-19 102.1 117 51.3
Carub.0003s0920 Capsella rubella HOM05D000468 ORTHO05D114682 6.3e-17 93.2 70 62.9
Nn7g36267 Nelumbo nucifera HOM05D003877 ORTHO05D004647 1.1e-16 92.4 60 71.7
Manes.15G188901 Manihot esculenta HOM05D003877 ORTHO05D004647 9.4e-13 79.3 48 75.0
TPR.G30156 Trifolium pratense HOM05D003877 ORTHO05D004647 5.7e-10 70.1 79 44.3
TPR.G5048 Trifolium pratense HOM05D003877 ORTHO05D004647 9.7e-10 69.3 72 45.8
CSS0003201 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 3.7e-09 67.4 64 51.6
SEGI_18884 Sequoiadendron giganteum HOM05D003877 ORTHO05D038325 3.1e-08 64.3 54 46.3
MELO3C033083.2 Cucumis melo HOM05D003877 ORTHO05D034944 9.1e-08 62.8 44 63.6
Lsat_1_v5_gn_6_23680 Lactuca sativa HOM05D001176 ORTHO05D014361 2.6e-07 61.2 59 54.2
MELO3C018376.2 Cucumis melo HOM05D003877 ORTHO05D004647 5.9e-07 60.1 45 57.8


User provided reference genes

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