Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 2.2e-100 369.0 195 100.0
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 1.2e-53 213.8 199 57.3
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 3.5e-53 212.2 193 57.0
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 4.6e-53 211.8 201 56.7
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 1.7e-47 193.4 160 62.5
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 1.7e-44 183.3 194 53.1
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 1.1e-43 180.6 200 52.0
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 1.9e-43 179.9 159 57.9
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 4.3e-43 178.7 120 70.0
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 9.5e-43 177.6 189 50.3
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 1.2e-42 177.2 195 50.8
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 2.1e-42 176.4 125 66.4
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 3.6e-42 175.6 159 56.6
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 3.6e-42 175.6 165 55.8
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 4.7e-42 175.3 190 49.5
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 6.2e-42 174.9 105 77.1
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 8.1e-42 174.5 106 74.5
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 1.1e-41 174.1 191 51.8
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.4e-41 173.7 192 51.0
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 1.8e-41 173.3 139 61.9
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.4e-41 172.9 156 57.7
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 2.4e-41 172.9 125 63.2
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 3.1e-41 172.6 163 55.8
SGA_v2.0_scaffold134G34742 Striga asiatica HOM05D005893 ORTHO05D007295 3.1e-41 172.6 134 73.1
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 3.1e-41 172.6 193 51.8
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 3.1e-41 172.6 197 52.3
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 4.0e-41 172.2 149 58.4
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 5.2e-41 171.8 193 49.2
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 6.8e-41 171.4 194 51.5
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 8.9e-41 171.0 163 54.6
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 1.2e-40 170.6 124 67.7
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 1.2e-40 170.6 199 47.7
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 1.2e-40 170.6 144 60.4
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 1.5e-40 170.2 169 54.4
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 1.5e-40 170.2 150 54.0
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 1.5e-40 170.2 159 54.7
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 2.0e-40 169.9 123 67.5
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 2.0e-40 169.9 196 49.5
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 2.6e-40 169.5 116 69.8
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 2.6e-40 169.5 112 68.8
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 2.6e-40 169.5 112 68.8
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 2.6e-40 169.5 112 68.8
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 3.4e-40 169.1 111 71.2
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 3.4e-40 169.1 163 54.6
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 4.4e-40 168.7 150 54.7
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 4.4e-40 168.7 137 59.9
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 5.8e-40 168.3 124 65.3
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 9.9e-40 167.5 158 56.3
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 1.7e-39 166.8 193 51.3
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 2.2e-39 166.4 157 58.0
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 2.2e-39 166.4 158 57.0
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 2.9e-39 166.0 196 49.0
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 2.9e-39 166.0 136 59.6
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 2.9e-39 166.0 124 62.9
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 2.9e-39 166.0 193 48.7
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 3.8e-39 165.6 103 72.8
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 4.9e-39 165.2 143 58.7
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 6.4e-39 164.9 110 70.9
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 6.4e-39 164.9 108 69.4
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 1.1e-38 164.1 196 50.0
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 1.1e-38 164.1 98 76.5
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 1.4e-38 163.7 171 53.2
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 1.9e-38 163.3 192 50.5
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 1.9e-38 163.3 164 54.9
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 2.4e-38 162.9 129 61.2
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 3.2e-38 162.5 137 56.9
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 4.1e-38 162.2 135 60.7
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.1e-37 159.8 100 73.0
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.0e-37 158.3 109 65.1
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 7.8e-37 157.9 138 58.0
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 1.0e-36 157.5 96 74.0
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 1.3e-36 157.1 161 51.6
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 1.7e-36 156.8 154 52.6
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 3.0e-36 156.0 100 70.0
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 3.9e-36 155.6 110 65.5
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 3.9e-36 155.6 96 72.9
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 3.9e-36 155.6 206 42.7
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 3.9e-36 155.6 191 46.6
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.1e-36 155.2 100 71.0
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 5.1e-36 155.2 154 51.9
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 5.1e-36 155.2 154 52.6
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 6.6e-36 154.8 159 52.8
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 6.6e-36 154.8 94 73.4
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 6.6e-36 154.8 118 61.9
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 3.3e-35 152.5 94 71.3
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 3.3e-35 152.5 94 71.3
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 3.3e-35 152.5 94 71.3
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 3.3e-35 152.5 217 47.0
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 4.3e-35 152.1 96 72.9
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 5.6e-35 151.8 94 71.3
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 5.6e-35 151.8 94 71.3
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 5.6e-35 151.8 94 71.3
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 5.6e-35 151.8 94 71.3
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 7.3e-35 151.4 193 44.0
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 7.3e-35 151.4 156 48.7
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 9.6e-35 151.0 94 70.2
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 1.2e-34 150.6 82 81.7
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 2.1e-34 149.8 94 69.1
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 2.8e-34 149.4 94 69.1
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 2.8e-34 149.4 198 46.0
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 2.8e-34 149.4 102 66.7
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 3.6e-34 149.1 195 45.6
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 4.7e-34 148.7 162 50.6
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 1.1e-33 147.5 193 43.0
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 1.4e-33 147.1 183 48.1
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 1.8e-33 146.7 150 52.7
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 2.4e-33 146.4 159 53.5
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 1.5e-32 143.7 141 55.3
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 2.0e-32 143.3 107 59.8
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.0e-32 143.3 107 59.8
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.0e-32 143.3 107 59.8
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 4.4e-32 142.1 107 59.8
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.8e-32 141.7 107 59.8
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 7.6e-32 141.4 138 56.5
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.3e-31 140.6 107 59.8
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 1.9e-30 136.7 138 52.2
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 3.9e-28 129.0 98 63.3
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 2.5e-27 126.3 77 70.1
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 4.3e-27 125.6 91 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 1.3e-26 124.0 130 47.7
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 4.8e-26 122.1 89 62.9
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 4.5e-24 115.5 112 48.2
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.3e-20 104.0 97 52.6
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 3.3e-19 99.4 72 61.1
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.3e-19 99.0 107 48.6
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 4.8e-18 95.5 139 40.3
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 1.2e-13 80.9 49 67.3
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.1e-13 80.1 107 43.9
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 5.1e-12 75.5 62 56.5
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.3e-11 72.8 89 44.9
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 1.6e-10 70.5 50 56.0
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 8.2e-10 68.2 69 58.0
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.4e-09 67.4 92 37.0
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.0e-09 65.9 62 51.6
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 1.2e-08 64.3 65 46.2
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 7.6e-08 61.6 42 66.7


User provided reference genes

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