Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 2.6e-175 618.6 308 100.0
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.8e-150 535.4 302 86.4
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 6.8e-144 514.2 308 80.2
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 4.9e-142 508.1 319 78.7
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 1.8e-136 489.6 308 75.6
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 4.4e-135 485.0 308 75.3
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.5e-135 484.2 302 78.1
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.5e-135 484.2 302 78.1
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 4.9e-134 481.5 302 77.2
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 1.4e-133 479.9 302 76.8
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.2e-132 476.9 302 77.5
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 3.5e-132 475.3 300 75.7
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 4.6e-132 474.9 303 74.3
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 6.0e-132 474.6 302 75.2
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 7.8e-132 474.2 302 75.2
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 3.0e-131 472.2 305 75.4
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 3.9e-131 471.9 302 72.8
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 6.6e-131 471.1 302 74.8
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 8.6e-131 470.7 299 76.6
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 4.3e-130 468.4 303 75.9
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 7.3e-130 467.6 311 73.6
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 9.5e-130 467.2 299 75.3
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 1.6e-129 466.5 302 73.5
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 3.6e-129 465.3 302 73.2
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 1.1e-128 463.8 300 75.7
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.8e-128 463.0 299 74.2
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.8e-128 463.0 299 73.6
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 1.8e-128 463.0 308 73.4
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 2.3e-128 462.6 299 74.6
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 4.0e-128 461.8 300 75.0
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 5.2e-128 461.5 306 72.2
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 1.2e-127 460.3 304 75.3
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.5e-127 459.9 302 72.8
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 2.6e-127 459.1 300 73.7
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 4.4e-127 458.4 309 72.5
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 4.4e-127 458.4 308 74.0
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 7.5e-127 457.6 300 74.3
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 1.7e-126 456.4 308 71.8
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 2.2e-126 456.1 307 72.6
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 2.9e-126 455.7 309 72.2
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 2.9e-126 455.7 300 73.7
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 3.7e-126 455.3 299 72.9
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 3.7e-126 455.3 300 74.0
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 4.9e-126 454.9 309 72.5
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 8.3e-126 454.1 300 72.3
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 8.3e-126 454.1 300 72.7
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 1.1e-125 453.8 309 72.2
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.4e-125 453.4 311 71.7
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 1.9e-125 453.0 299 71.2
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 3.2e-125 452.2 309 72.2
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 4.1e-125 451.8 300 73.7
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 5.4e-125 451.4 307 72.3
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 5.4e-125 451.4 299 72.2
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 9.2e-125 450.7 307 71.7
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 9.2e-125 450.7 307 72.3
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 1.2e-124 450.3 299 71.9
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 2.7e-124 449.1 308 71.1
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 4.6e-124 448.4 302 70.9
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 4.6e-124 448.4 302 70.9
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 7.8e-124 447.6 302 71.9
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 1.3e-123 446.8 303 71.6
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 5.1e-123 444.9 307 71.3
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.1e-122 443.7 307 71.0
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.1e-122 443.7 307 71.0
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 1.5e-122 443.4 299 71.9
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 1.5e-122 443.4 299 70.9
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 4.3e-122 441.8 301 71.1
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 4.3e-122 441.8 301 71.1
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 7.3e-122 441.0 301 70.4
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 1.6e-121 439.9 300 72.0
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 2.1e-121 439.5 299 69.6
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 2.1e-121 439.5 301 71.1
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 2.8e-121 439.1 302 70.5
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 3.6e-121 438.7 299 71.6
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 4.7e-121 438.3 299 70.2
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 1.8e-120 436.4 299 69.6
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 3.1e-120 435.6 299 71.9
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 4.0e-120 435.3 302 70.9
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 5.2e-120 434.9 302 67.5
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 6.8e-120 434.5 344 65.4
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 8.9e-120 434.1 307 70.7
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 1.2e-119 433.7 302 68.5
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 2.0e-119 433.0 303 70.3
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 2.6e-119 432.6 352 61.9
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 2.6e-119 432.6 317 67.5
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 7.6e-119 431.0 302 66.2
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 4.9e-118 428.3 315 68.3
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 7.1e-117 424.5 303 70.6
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 2.1e-116 422.9 379 58.6
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.1e-116 422.9 310 67.7
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 7.8e-116 421.0 281 72.2
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 4.3e-114 415.2 321 60.4
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 7.3e-114 414.5 274 73.4
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 7.3e-114 414.5 303 65.7
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 5.2e-112 408.3 240 81.2
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 2.6e-111 406.0 309 66.7
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 3.2e-109 399.1 296 66.6
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 8.7e-107 391.0 285 67.0
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 6.2e-105 384.8 302 64.6
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 1.4e-104 383.6 245 75.5
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 1.9e-101 373.2 258 70.5
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 9.3e-101 370.9 305 63.3
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 1.5e-98 363.6 308 60.1
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 3.3e-98 362.5 241 72.6
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.2e-93 345.5 241 65.6
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 9.6e-90 334.3 211 75.4
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 6.2e-89 331.6 303 54.8
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 7.6e-87 324.7 302 55.3
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 8.4e-86 321.2 298 54.0
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 1.4e-85 320.5 217 68.7
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 4.8e-81 305.4 298 52.3
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 3.7e-73 279.3 291 48.8
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.1e-60 236.9 148 77.7
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 2.6e-58 229.9 319 42.0
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.4e-58 228.4 146 77.4
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 4.8e-57 225.7 290 41.7
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.8e-56 223.8 180 58.9
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 4.4e-50 202.6 156 61.5
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 3.6e-44 183.0 186 56.5
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 9.8e-42 174.9 149 60.4
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 3.3e-37 159.8 149 55.7
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 4.7e-28 129.4 100 62.0
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 5.8e-26 122.5 100 60.0
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 8.3e-25 118.6 90 65.6
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 8.6e-22 108.6 67 76.1
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 4.3e-21 106.3 67 71.6
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.1e-20 104.0 62 74.2
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.3e-17 94.7 59 69.5
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 3.7e-17 93.2 86 53.5


User provided reference genes

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