Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01281 Striga asiatica HOM05D017085 ORTHO05D026193 1.5e-80 302.8 149 100.0
SGA_v2.0_scaffold4165G54433 Striga asiatica HOM05D017085 ORTHO05D026193 3.3e-27 125.6 118 61.0
SGA_v2.0_scaffold8G04316 Striga asiatica HOM05D017085 ORTHO05D026193 9.6e-27 124.0 115 60.9
SGA_v2.0_scaffold166G38396 Striga asiatica HOM05D017085 ORTHO05D026193 4.9e-15 85.1 94 57.4
SGA_v2.0_scaffold79G25509 Striga asiatica HOM05D017085 ORTHO05D026193 6.4e-15 84.7 94 55.3
vmacro07188 Vaccinium macrocarpon HOM05D001605 ORTHO05D007904 1.1e-11 73.9 107 35.5
COL.COLO4_19731 Corchorus olitorius HOM05D000030 ORTHO05D000009 6.2e-10 68.2 105 35.2
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.8e-09 66.6 71 40.8
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 6.9e-09 64.7 115 34.8
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.9e-09 64.7 115 34.8
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 1.5e-08 63.5 100 36.0
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.6e-08 62.8 115 35.7
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 2.6e-08 62.8 115 35.7
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 3.4e-08 62.4 116 34.5
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.4e-08 62.4 109 37.6
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 7.6e-08 61.2 71 39.4
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 9.9e-08 60.8 115 34.8
Dinv22059 Davidia involucrata HOM05D022575 ORTHO05D020547 9.9e-08 60.8 69 39.1
Dinv22429 Davidia involucrata HOM05D022575 ORTHO05D020547 9.9e-08 60.8 107 31.8
SGA_v2.0_scaffold56G19922 Striga asiatica HOM05D027498 ORTHO05D007344 9.9e-08 60.8 132 31.1
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-07 59.7 120 33.3
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.8e-07 58.9 71 39.4
Dinv32675 Davidia involucrata HOM05D022575 ORTHO05D020547 3.8e-07 58.9 69 39.1
COL.COLO4_03620 Corchorus olitorius HOM05D019187 ORTHO05D007344 6.4e-07 58.2 98 35.7
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 6.4e-07 58.2 119 36.1
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.4e-07 57.8 97 42.3
CSS0044901 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.4e-07 57.8 85 40.0
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.4e-07 57.8 115 33.9
Dinv16326 Davidia involucrata HOM05D022692 ORTHO05D020547 8.4e-07 57.8 98 31.6
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.4e-07 57.8 103 33.0
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-06 57.4 84 35.7
Rhsim01G0169500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.9e-06 56.6 91 36.3
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 3.2e-06 55.8 95 33.7
Dinv30132 Davidia involucrata HOM05D022692 ORTHO05D020547 4.2e-06 55.5 98 30.6
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 5.5e-06 55.1 95 33.7
SGA_v2.0_scaffold87G27159 Striga asiatica HOM05D024920 ORTHO05D023790 5.5e-06 55.1 130 30.0
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-06 54.7 109 38.5
Rhsim09G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.3e-06 54.3 117 31.6


User provided reference genes

Program Settings