Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01204 Striga asiatica HOM05D001099 ORTHO05D000958 3.2e-80 301.6 144 100.0
SGA_v2.0_scaffold238G43953 Striga asiatica HOM05D001099 ORTHO05D405309 6.7e-78 293.9 153 94.1
SGA_v2.0_scaffold2G01178 Striga asiatica HOM05D001099 ORTHO05D000958 2.7e-18 95.9 127 40.9
SGA_v2.0_scaffold2G01177 Striga asiatica HOM05D001099 ORTHO05D008869 6.2e-15 84.7 100 43.0
SGA_v2.0_scaffold136G34998 Striga asiatica HOM05D001099 ORTHO05D000958 2.6e-13 79.3 113 46.0
Oeu035950.1 Olea europaea HOM05D001099 ORTHO05D000958 5.8e-13 78.2 150 36.0
Migut.F01183 Erythranthe guttata HOM05D001099 ORTHO05D000958 9.9e-13 77.4 153 37.9
SalBow2G2546 Salvia bowleyana HOM05D001099 ORTHO05D000958 9.9e-13 77.4 112 41.1
Aqoxy5G03898 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 2.2e-12 76.3 119 38.7
MSTRG.129 Avicennia marina HOM05D001099 ORTHO05D000958 2.9e-12 75.9 111 41.4
MSTRG.27200 Avicennia marina HOM05D001099 ORTHO05D000958 4.9e-12 75.1 112 42.0
unitig_736.g22948 Utricularia gibba HOM05D001099 ORTHO05D000958 6.4e-12 74.7 111 40.5
Migut.C00065 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.4e-11 73.6 154 35.1
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 2.4e-11 72.8 114 37.7
MSTRG.8412 Avicennia marina HOM05D001099 ORTHO05D000958 4.2e-11 72.0 111 39.6
Lj8P261T47 Lonicera japonica HOM05D001099 ORTHO05D000958 4.2e-11 72.0 120 36.7
Migut.F00477 Erythranthe guttata HOM05D001099 ORTHO05D000958 5.4e-11 71.6 153 34.0
Migut.F00478 Erythranthe guttata HOM05D001099 ORTHO05D000958 7.1e-11 71.2 112 41.1
Dinv28574 Davidia involucrata HOM05D001099 ORTHO05D000958 9.3e-11 70.9 103 40.8
Gohir.A08G170900 Gossypium hirsutum HOM05D001099 ORTHO05D000958 9.3e-11 70.9 134 34.3
FvH4_7g27540 Fragaria vesca HOM05D001099 ORTHO05D000958 1.2e-10 70.5 111 41.4
FAN06G1895 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-10 70.5 111 41.4
FAN06G3855 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-10 70.5 111 41.4
FAN10G0801 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-10 70.5 111 41.4
Os02g0758000 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 1.2e-10 70.5 116 39.7
Prupe.5G071200 Prunus persica HOM05D001099 ORTHO05D000958 1.2e-10 70.5 119 38.7
RcHm_v2.0_Chr1g0374411 Rosa chinensis HOM05D001099 ORTHO05D000958 1.2e-10 70.5 111 37.8
Cc02_g04250 Coffea canephora HOM05D001099 ORTHO05D000958 1.6e-10 70.1 139 36.0
CAN.G1367.2 Capsicum annuum HOM05D001099 ORTHO05D000958 2.1e-10 69.7 128 35.9
Cc08_g12550 Coffea canephora HOM05D001099 ORTHO05D000958 2.7e-10 69.3 110 36.4
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.7e-10 69.3 119 35.3
Zm00001eb193940 Zea mays HOM05D001099 ORTHO05D000958 2.7e-10 69.3 106 40.6
Cfa012707 Carpinus fangiana HOM05D001099 ORTHO05D000958 3.5e-10 68.9 119 37.8
Migut.C00062 Erythranthe guttata HOM05D001099 ORTHO05D000958 3.5e-10 68.9 109 39.4
FAN13G2298 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.5e-10 68.9 103 36.9
Peaxi162Scf00002g00191 Petunia axillaris HOM05D001099 ORTHO05D000958 3.5e-10 68.9 120 35.0
Atru.chr1.726 Acer truncatum HOM05D001099 ORTHO05D000958 4.6e-10 68.6 120 35.8
Nitab4.5_0000312g0130 Nicotiana tabacum HOM05D001099 ORTHO05D000958 4.6e-10 68.6 103 38.8
PSO063G5704 Papaver somniferum HOM05D001099 ORTHO05D000958 4.6e-10 68.6 146 34.2
PSO782G1367 Papaver somniferum HOM05D001099 ORTHO05D000958 4.6e-10 68.6 146 34.2
BcaNung06351 Brassica carinata HOM05D001099 ORTHO05D000958 6.0e-10 68.2 125 36.8
CDE05G1533 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 6.0e-10 68.2 104 40.4
FAN08G3558 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.0e-10 68.2 119 34.5
Lj8P261T44 Lonicera japonica HOM05D001099 ORTHO05D000958 6.0e-10 68.2 117 38.5
SGA_v2.0_scaffold2G01176 Striga asiatica HOM05D006974 ORTHO05D008869 6.0e-10 68.2 125 36.8
Actinidia14437 Actinidia chinensis HOM05D001099 ORTHO05D000958 7.9e-10 67.8 120 33.3
Ca_19626_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 7.9e-10 67.8 121 38.0
FvH4_5g18720 Fragaria vesca HOM05D001099 ORTHO05D000958 7.9e-10 67.8 119 34.5
FAN18G3089 Fragaria x ananassa HOM05D001099 ORTHO05D000958 7.9e-10 67.8 119 34.5
vmacro06798 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 7.9e-10 67.8 104 38.5
CAN.G164.15 Capsicum annuum HOM05D001099 ORTHO05D000958 1.0e-09 67.4 128 35.9
Migut.C00064 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.0e-09 67.4 112 41.1
Oeu022488.1 Olea europaea HOM05D001099 ORTHO05D000958 1.0e-09 67.4 118 37.3
Atru.chr1.727 Acer truncatum HOM05D001099 ORTHO05D000958 1.3e-09 67.0 119 37.0
Lj2P216T41 Lonicera japonica HOM05D001099 ORTHO05D000958 1.3e-09 67.0 120 39.2
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 1.3e-09 67.0 119 34.5
CAN.G1367.3 Capsicum annuum HOM05D001099 ORTHO05D000958 1.8e-09 66.6 103 36.9
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 1.8e-09 66.6 118 33.9
Migut.C00061 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.8e-09 66.6 125 36.0
Glyma.12G013100 Glycine max HOM05D001099 ORTHO05D000958 1.8e-09 66.6 121 37.2
Sp6g13600 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.8e-09 66.6 123 35.0
TPR.G20264 Trifolium pratense HOM05D001099 ORTHO05D000958 1.8e-09 66.6 113 36.3
GSVIVG01018654001 Vitis vinifera HOM05D001099 ORTHO05D000958 1.8e-09 66.6 104 40.4
BcaC09g50798 Brassica carinata HOM05D001099 ORTHO05D000958 2.3e-09 66.2 125 36.0
C01p20640 Brassica napus HOM05D001099 ORTHO05D000958 2.3e-09 66.2 125 36.0
BolC1t01993H Brassica oleracea HOM05D001099 ORTHO05D000958 2.3e-09 66.2 125 36.0
BraA03t10910Z Brassica rapa HOM05D001099 ORTHO05D000958 2.3e-09 66.2 102 34.3
Cpa.g.sc3.323 Carica papaya HOM05D001099 ORTHO05D000958 2.3e-09 66.2 119 36.1
HanXRQChr03g0088611 Helianthus annuus HOM05D001099 ORTHO05D000958 2.3e-09 66.2 122 36.9
Nitab4.5_0007598g0030 Nicotiana tabacum HOM05D001099 ORTHO05D000958 2.3e-09 66.2 99 38.4
COL.COLO4_37189 Corchorus olitorius HOM05D001099 ORTHO05D000958 3.0e-09 65.9 112 36.6
Os06g0219500 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 3.0e-09 65.9 96 40.6
Potri.003G109200 Populus trichocarpa HOM05D001099 ORTHO05D000958 3.0e-09 65.9 112 37.5
Haze_07927 Corylus avellana HOM05D001099 ORTHO05D000958 3.9e-09 65.5 119 36.1
FAN01G1499 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.9e-09 65.5 111 38.7
Hund14531 Selenicereus undatus HOM05D001099 ORTHO05D000958 3.9e-09 65.5 119 37.8
Thecc.03G155700 Theobroma cacao HOM05D001099 ORTHO05D000958 3.9e-09 65.5 119 35.3
TWI23G0452 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 3.9e-09 65.5 119 37.0
A01p16470 Brassica napus HOM05D001099 ORTHO05D000958 5.1e-09 65.1 125 35.2
BraA01t01601Z Brassica rapa HOM05D001099 ORTHO05D000958 5.1e-09 65.1 125 35.2
DCAR_027781 Daucus carota HOM05D001099 ORTHO05D000958 5.1e-09 65.1 107 36.4
MD06G1060300 Malus domestica HOM05D001099 ORTHO05D000958 5.1e-09 65.1 117 34.2
Nn6g33979 Nelumbo nucifera HOM05D001099 ORTHO05D000958 5.1e-09 65.1 119 33.6
CiPaw.12G109200 Carya illinoinensis HOM05D001099 ORTHO05D000958 6.7e-09 64.7 118 34.7
ClCG10G002740 Citrullus lanatus HOM05D001099 ORTHO05D000958 6.7e-09 64.7 118 36.4
MELO3C013945.2 Cucumis melo HOM05D001099 ORTHO05D000958 6.7e-09 64.7 103 37.9
Gorai.008G216100 Gossypium raimondii HOM05D001099 ORTHO05D000958 6.7e-09 64.7 102 35.3
Lalb_Chr01g0000691 Lupinus albus HOM05D001099 ORTHO05D000958 6.7e-09 64.7 104 39.4
Manes.06G134700 Manihot esculenta HOM05D001099 ORTHO05D000958 6.7e-09 64.7 104 38.5
PSO782G2285 Papaver somniferum HOM05D001099 ORTHO05D000958 6.7e-09 64.7 103 37.9
PGR031G0040 Punica granatum HOM05D001099 ORTHO05D000958 6.7e-09 64.7 117 33.3
Sabra03G0075700 Salix brachista HOM05D001099 ORTHO05D000958 6.7e-09 64.7 112 36.6
VMungo1127G1536 Vigna mungo HOM05D001099 ORTHO05D000958 6.7e-09 64.7 104 40.4
CSS0016514 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 8.7e-09 64.3 118 34.7
CANSAT56G2602 Cannabis sativa HOM05D001099 ORTHO05D000958 8.7e-09 64.3 119 37.0
AL8G25730 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 1.1e-08 63.9 108 38.9
CANSAT56G3256 Cannabis sativa HOM05D001099 ORTHO05D000958 1.1e-08 63.9 119 37.0
Phvul.011G016100 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 1.1e-08 63.9 104 40.4
Hund11593 Selenicereus undatus HOM05D001099 ORTHO05D000958 1.1e-08 63.9 118 37.3
arahy.Tifrunner.gnm1.ann1.PCT7KU Arachis hypogaea HOM05D001099 ORTHO05D000958 1.5e-08 63.5 118 36.4
arahy.Tifrunner.gnm1.ann1.TQI4QJ Arachis hypogaea HOM05D001099 ORTHO05D000958 1.5e-08 63.5 118 36.4
A03p16190 Brassica napus HOM05D001099 ORTHO05D000958 1.5e-08 63.5 112 34.8
AUR62007509 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.5e-08 63.5 118 38.1
CsaV3_3G002770 Cucumis sativus L. HOM05D001099 ORTHO05D000958 1.5e-08 63.5 118 35.6
Gohir.A12G198400 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.5e-08 63.5 102 35.3
Medtr0004s0510 Medicago truncatula HOM05D001099 ORTHO05D000958 1.5e-08 63.5 120 35.0
Peaxi162Scf00023g01123 Petunia axillaris HOM05D001099 ORTHO05D000958 1.5e-08 63.5 103 39.8
MSTRG.27202 Avicennia marina HOM05D001099 ORTHO05D000958 1.9e-08 63.2 110 35.5
AUR62039962 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.9e-08 63.2 118 38.1
ClCG04G005380 Citrullus lanatus HOM05D001099 ORTHO05D000958 1.9e-08 63.2 118 35.6
Ciclev10006241m.g Citrus clementina HOM05D001099 ORTHO05D000958 1.9e-08 63.2 103 35.9
CsaV3_3G002780 Cucumis sativus L. HOM05D001099 ORTHO05D000958 1.9e-08 63.2 118 34.7
Eucgr.E00433 Eucalyptus grandis HOM05D001099 ORTHO05D000958 1.9e-08 63.2 119 34.5
Sp7g23220 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.9e-08 63.2 124 36.3
CARHR232600 Cardamine hirsuta HOM05D001099 ORTHO05D000958 2.5e-08 62.8 124 34.7
Thhalv10026232m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 2.5e-08 62.8 124 35.5
Rhsim07G0020900 Rhododendron simsii HOM05D001099 ORTHO05D000958 2.5e-08 62.8 119 31.9
Solyc08g078700.2 Solanum lycopersicum HOM05D001099 ORTHO05D000958 2.5e-08 62.8 103 35.0
Sopen08g027180 Solanum pennellii HOM05D001099 ORTHO05D000958 2.5e-08 62.8 103 35.0
MELO3C013946.2 Cucumis melo HOM05D001099 ORTHO05D000958 3.3e-08 62.4 118 34.7
SGA_v2.0_scaffold4G02380 Striga asiatica HOM05D001099 ORTHO05D000958 3.3e-08 62.4 109 37.6
TAR082G0002 Trochodendron aralioides HOM05D001099 ORTHO05D000958 3.3e-08 62.4 119 33.6
Manes.14G036000 Manihot esculenta HOM05D001099 ORTHO05D000958 4.3e-08 62.0 119 36.1
Psat4g136720 Pisum sativum HOM05D001099 ORTHO05D000958 4.3e-08 62.0 105 35.2
PGSC0003DMG400004808 Solanum tuberosum HOM05D001099 ORTHO05D000958 4.3e-08 62.0 103 35.0
Aa31LG7G10380 Aethionema arabicum HOM05D001099 ORTHO05D000958 5.6e-08 61.6 112 33.9
AL7G27950 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 5.6e-08 61.6 125 33.6
COL.COLO4_14123 Corchorus olitorius HOM05D001099 ORTHO05D000958 5.6e-08 61.6 105 38.1
Gohir.D08G189200 Gossypium hirsutum HOM05D001099 ORTHO05D000958 5.6e-08 61.6 117 34.2
Gohir.D12G201000 Gossypium hirsutum HOM05D001099 ORTHO05D000958 5.6e-08 61.6 102 33.3
Lj3g0025824 Lotus japonicus HOM05D001099 ORTHO05D000958 5.6e-08 61.6 104 36.5
Sed0013728 Sechium edule HOM05D001099 ORTHO05D000958 5.6e-08 61.6 119 34.5
Thecc.03G252700 Theobroma cacao HOM05D001099 ORTHO05D000958 5.6e-08 61.6 112 35.7
EL10Ac5g13076 Beta vulgaris HOM05D001099 ORTHO05D000958 7.4e-08 61.2 121 35.5
Duzib205G0330 Durio zibethinus HOM05D001099 ORTHO05D000958 7.4e-08 61.2 104 32.7
Eucgr.D02073 Eucalyptus grandis HOM05D001099 ORTHO05D000958 7.4e-08 61.2 121 32.2
MBI05_g10091_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 7.4e-08 61.2 112 35.7
Nn1g01033 Nelumbo nucifera HOM05D001099 ORTHO05D000958 7.4e-08 61.2 108 34.3
AT4G25200 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 9.6e-08 60.8 124 33.9
AT5G51440 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 9.6e-08 60.8 105 35.2
Hma1.2p1_0432F.1_g151730 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 9.6e-08 60.8 111 39.6
Hma1.2p1_1640F.1_g295060 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 9.6e-08 60.8 104 33.7
SalBow8G3662 Salvia bowleyana HOM05D008298 ORTHO05D000958 9.6e-08 60.8 110 37.3
CDE03G0474 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 1.3e-07 60.5 121 33.9
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 1.3e-07 60.5 119 31.1
Thhalv10014661m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 1.6e-07 60.1 109 34.9
HanXRQChr13g0418041 Helianthus annuus HOM05D001099 ORTHO05D000958 1.6e-07 60.1 107 34.6
TWI39G1145 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 1.6e-07 60.1 117 33.3
Carub.0008s1146 Capsella rubella HOM05D001099 ORTHO05D000958 2.1e-07 59.7 107 35.5
TWI81G0609 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 2.1e-07 59.7 103 34.0
Gorai.004G199300 Gossypium raimondii HOM05D001099 ORTHO05D000958 2.8e-07 59.3 117 34.2
MD07G1253800 Malus domestica HOM05D001099 ORTHO05D000958 2.8e-07 59.3 106 34.0
Actinidia02125 Actinidia chinensis HOM05D001099 ORTHO05D000958 3.7e-07 58.9 104 27.9
ECA240G1483 Erigeron canadensis HOM05D001099 ORTHO05D000958 3.7e-07 58.9 115 30.4
PGR042G1017 Punica granatum HOM05D001099 ORTHO05D000958 3.7e-07 58.9 123 35.8
Carub.0007s1583 Capsella rubella HOM05D001099 ORTHO05D000958 4.8e-07 58.5 125 32.8
CARHR264170 Cardamine hirsuta HOM05D001099 ORTHO05D000958 4.8e-07 58.5 108 37.0
Ciclev10005925m.g Citrus clementina HOM05D001099 ORTHO05D000958 6.2e-07 58.2 101 35.6
Hma1.2p1_1132F.1_g260320 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 6.2e-07 58.2 129 33.3
Hma1.2p1_1640F.1_g295063 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 6.2e-07 58.2 129 33.3
Ah.12g056780 Amaranthus hybridus HOM05D001099 ORTHO05D000958 1.1e-06 57.4 104 37.5
Oeu038321.1 Olea europaea HOM05D001099 ORTHO05D000958 1.1e-06 57.4 103 33.0
Sc01g0008520 Simmondsia chinensis HOM05D001099 ORTHO05D000958 1.1e-06 57.4 104 36.5
Dinv21631 Davidia involucrata HOM05D001099 ORTHO05D010560 1.4e-06 57.0 90 27.8
Rhsim03G0167300 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.4e-06 57.0 100 35.0
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 1.4e-06 57.0 86 37.2
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 1.8e-06 56.6 101 31.7
Lj5C71T5 Lonicera japonica HOM05D000136 ORTHO05D007933 3.1e-06 55.8 99 33.3
QL12p012417 Quercus lobata HOM05D001099 ORTHO05D000958 3.1e-06 55.8 119 32.8
Potri.003G076000 Populus trichocarpa HOM05D001099 ORTHO05D000958 4.0e-06 55.5 116 31.0
GSVIVG01001315001 Vitis vinifera HOM05D001099 ORTHO05D000958 4.0e-06 55.5 118 31.4
EL10Ac8g20401 Beta vulgaris HOM05D001099 ORTHO05D000958 5.3e-06 55.1 148 28.4
Lsat_1_v5_gn_3_481 Lactuca sativa HOM05D001099 ORTHO05D000958 5.3e-06 55.1 112 34.8
Potri.003G075900 Populus trichocarpa HOM05D001099 ORTHO05D000958 5.3e-06 55.1 86 36.0
A10p09350 Brassica napus HOM05D001099 ORTHO05D000958 6.9e-06 54.7 87 35.6
Hma1.2p1_1786F.1_g302340 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 6.9e-06 54.7 86 39.5
Potri.006G034600 Populus trichocarpa HOM05D001099 ORTHO05D000958 6.9e-06 54.7 135 26.7
BraA10t43011Z Brassica rapa HOM05D001099 ORTHO05D000958 9.0e-06 54.3 87 35.6
GSVIVG01001316001 Vitis vinifera HOM05D001099 ORTHO05D000958 9.0e-06 54.3 89 32.6


User provided reference genes

Program Settings