Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 2.1e-303 1045.0 583 100.0
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 3.2e-275 951.4 584 91.6
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.7e-228 796.2 515 81.2
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 1.2e-226 790.0 547 82.4
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 6.7e-225 784.3 435 89.0
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 3.0e-217 758.8 535 80.0
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 2.1e-215 752.7 546 78.8
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 6.2e-215 751.1 531 76.5
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 8.2e-215 750.7 475 81.5
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.1e-214 750.4 535 78.7
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 2.4e-214 749.2 546 77.1
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 2.0e-213 746.1 441 85.0
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 2.6e-213 745.7 548 76.6
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 2.6e-213 745.7 537 79.3
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 3.4e-213 745.3 529 75.4
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 5.0e-212 741.5 562 77.0
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 5.0e-212 741.5 553 77.2
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 6.5e-212 741.1 559 76.2
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 5.5e-211 738.0 461 82.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.2e-210 736.9 495 78.6
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 1.6e-210 736.5 565 75.2
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 4.6e-210 734.9 486 78.8
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 1.0e-209 733.8 563 74.8
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.0e-209 733.8 530 78.5
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 8.7e-209 730.7 489 77.9
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 8.7e-209 730.7 438 84.2
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 8.7e-209 730.7 515 75.5
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 1.1e-208 730.3 532 77.3
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 1.5e-208 729.9 534 77.9
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 1.9e-208 729.6 504 78.2
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 1.9e-208 729.6 504 76.2
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 1.9e-208 729.6 530 73.4
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.9e-208 729.6 523 74.8
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 2.5e-208 729.2 527 77.8
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 3.3e-208 728.8 532 78.6
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 5.7e-208 728.0 461 80.7
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 2.2e-207 726.1 492 79.1
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 8.2e-207 724.2 528 74.1
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.4e-206 723.4 519 75.9
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 2.4e-206 722.6 532 77.3
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 2.0e-205 719.5 517 72.3
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 1.0e-204 717.2 488 78.3
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 1.3e-204 716.8 565 75.9
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.1e-203 713.8 489 74.0
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 1.4e-203 713.4 527 72.5
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 1.4e-203 713.4 532 73.9
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 5.5e-203 711.4 532 71.8
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 7.2e-203 711.1 554 74.7
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 1.2e-202 710.3 453 79.7
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 4.6e-202 708.4 492 76.8
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 1.4e-201 706.8 485 76.1
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 2.3e-201 706.1 486 75.1
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 3.0e-201 705.7 436 82.1
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 3.9e-201 705.3 534 74.7
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.5e-200 702.6 428 82.0
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 7.4e-200 701.0 525 76.8
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.3e-199 700.3 457 79.9
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 3.7e-199 698.7 506 71.3
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 4.8e-199 698.4 503 72.4
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.8e-198 696.4 492 75.0
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 5.3e-198 694.9 492 74.8
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 5.3e-198 694.9 454 77.5
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 5.3e-198 694.9 491 75.8
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 6.9e-198 694.5 495 74.5
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 1.2e-197 693.7 498 76.5
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 1.5e-197 693.3 499 73.1
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 4.5e-197 691.8 519 70.5
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 1.0e-196 690.6 524 74.8
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 2.2e-196 689.5 494 74.1
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 1.1e-195 687.2 543 68.7
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 1.2e-194 683.7 575 66.3
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 3.0e-193 679.1 477 75.7
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.5e-192 676.8 497 72.0
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 2.6e-192 676.0 448 77.9
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 7.4e-192 674.5 436 78.0
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 4.8e-191 671.8 424 79.2
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 1.4e-190 670.2 491 71.1
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 7.0e-190 667.9 432 78.0
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 1.2e-189 667.2 550 69.5
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 1.5e-189 666.8 433 78.1
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.6e-189 666.0 424 79.2
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 5.9e-189 664.8 424 79.2
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.0e-188 664.1 431 77.5
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 1.7e-188 663.3 438 76.7
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 1.7e-188 663.3 438 76.7
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 2.9e-188 662.5 516 68.6
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 3.8e-188 662.1 438 76.7
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 1.5e-187 660.2 428 78.0
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.9e-187 659.8 475 73.1
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 2.5e-187 659.4 424 77.6
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 2.7e-186 656.0 492 71.1
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 1.8e-185 653.3 438 76.3
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 2.3e-185 652.9 465 73.8
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 7.5e-184 647.9 432 76.6
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 2.8e-183 646.0 543 70.7
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.4e-177 627.1 493 69.4
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.7e-175 620.2 430 74.4
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.8e-175 618.6 494 69.2
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 4.8e-175 618.6 497 68.2
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 5.4e-174 615.1 342 88.6
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.2e-172 609.8 426 74.4
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 2.5e-171 606.3 418 71.5
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 4.0e-169 599.0 397 77.3
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 1.5e-168 597.0 521 61.4
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 2.8e-167 592.8 512 62.9
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 4.9e-167 592.0 506 63.4
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 3.1e-166 589.3 506 63.8
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 4.1e-166 589.0 527 63.6
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 7.0e-166 588.2 492 63.6
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 5.9e-165 585.1 517 61.9
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 2.9e-164 582.8 352 82.4
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 6.6e-164 581.6 486 63.0
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 2.5e-163 579.7 463 65.7
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 9.8e-160 567.8 417 72.4
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 3.7e-159 565.8 402 74.6
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 3.5e-157 559.3 447 69.1
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 2.6e-152 543.1 498 59.0
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 3.9e-148 529.3 478 60.5
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.3e-147 525.8 478 59.6
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 1.6e-146 523.9 438 62.1
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 6.6e-140 501.9 417 65.5
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.5e-136 490.7 493 56.2
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.3e-135 487.6 393 65.9
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 5.1e-132 475.7 489 57.9
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 2.1e-130 470.3 412 59.7
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 1.1e-129 468.0 527 51.6
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 1.5e-128 464.2 491 55.8
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 8.4e-127 458.4 422 60.0
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 1.1e-126 458.0 446 54.0
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 5.4e-126 455.7 471 53.3
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 2.1e-125 453.8 452 54.6
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 7.8e-125 451.8 433 59.4
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 1.4e-118 431.0 499 52.7
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 1.4e-118 431.0 474 53.8
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 2.3e-116 423.7 497 52.3
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 1.6e-114 417.5 415 53.0
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 1.2e-112 411.4 688 41.0
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 9.6e-107 391.7 346 59.0
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 4.2e-102 376.3 343 61.2
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 1.1e-99 368.2 452 48.9
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 1.5e-99 367.9 284 67.6
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 1.3e-98 364.8 464 48.7
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 3.7e-98 363.2 255 74.1
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 5.9e-96 355.9 298 62.1
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 2.6e-88 330.5 426 46.9
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 3.4e-88 330.1 524 42.6
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 1.1e-81 308.5 411 41.8
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 3.6e-77 293.5 255 61.6
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 8.8e-76 288.9 342 46.8
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 2.0e-75 287.7 265 69.4
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 5.9e-72 276.2 166 82.5
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 2.5e-70 270.8 359 47.6
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 6.3e-50 203.0 294 46.3
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 1.3e-39 168.7 98 78.6
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 1.3e-31 142.1 100 68.0
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 2.3e-28 131.3 212 41.5
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 2.6e-27 127.9 130 56.2
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 9.8e-27 125.9 106 63.2
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.7e-26 125.2 93 74.2
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 5.6e-22 110.2 130 50.8
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.1e-20 105.9 70 74.3
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 1.8e-20 105.1 209 40.2
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 8.9e-20 102.8 123 48.8
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 8.9e-20 102.8 151 42.4
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 1.3e-18 99.0 130 47.7
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 1.9e-17 95.1 83 57.8
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 2.4e-17 94.7 157 40.8
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 4.1e-17 94.0 45 91.1
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 4.6e-16 90.5 229 31.4
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 1.7e-15 88.6 75 53.3
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 1.6e-13 82.0 46 84.8
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 3.1e-12 77.8 143 37.1
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 1.2e-11 75.9 128 41.4
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 1.9e-09 68.6 51 62.7
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 3.2e-09 67.8 96 44.8
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 7.1e-09 66.6 77 51.9
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 2.1e-08 65.1 199 25.6
CiPaw.05G188800 Carya illinoinensis HOM05D003858 ORTHO05D127864 7.8e-08 63.2 39 82.1
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 1.5e-06 58.9 202 23.3


User provided reference genes

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