Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 5.9e-90 334.3 189 100.0
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 5.2e-62 241.5 191 70.2
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 2.7e-58 229.2 193 73.6
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.7e-52 209.9 192 70.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 2.4e-43 179.5 184 57.6
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.2e-42 177.2 195 58.5
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 6.0e-42 174.9 206 52.4
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.3e-41 172.9 199 61.8
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 6.6e-41 171.4 190 61.1
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 8.7e-41 171.0 108 76.9
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.1e-40 170.6 220 49.5
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 3.3e-40 169.1 189 54.0
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 3.3e-40 169.1 109 75.2
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 9.6e-40 167.5 109 75.2
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.6e-39 166.8 175 55.4
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 4.7e-39 165.2 194 56.7
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 6.2e-39 164.9 196 57.7
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 6.2e-39 164.9 109 74.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 8.1e-39 164.5 192 52.1
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.1e-38 164.1 183 53.0
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 1.8e-38 163.3 189 52.9
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 4.0e-38 162.2 158 55.7
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 6.9e-38 161.4 211 49.3
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 6.9e-38 161.4 106 74.5
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 9.0e-38 161.0 196 50.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.2e-37 160.6 106 74.5
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.2e-37 160.6 106 74.5
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.2e-37 160.6 110 73.6
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 1.5e-37 160.2 169 58.6
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 5.8e-37 158.3 203 55.7
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 7.6e-37 157.9 200 50.0
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 9.9e-37 157.5 148 64.2
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.7e-36 156.8 202 49.5
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.7e-36 156.8 195 56.9
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.7e-36 156.8 195 57.4
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.2e-36 156.4 204 50.0
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 6.4e-36 154.8 102 73.5
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 6.4e-36 154.8 194 49.5
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 6.4e-36 154.8 133 62.4
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 8.4e-36 154.5 198 49.5
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 8.4e-36 154.5 201 56.7
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.4e-35 153.7 192 51.0
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 2.4e-35 152.9 164 59.1
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 2.4e-35 152.9 187 52.4
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 3.2e-35 152.5 192 50.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 5.4e-35 151.8 190 51.1
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 5.4e-35 151.8 190 51.1
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 5.4e-35 151.8 190 51.1
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 5.4e-35 151.8 203 54.2
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.1e-35 151.4 175 57.1
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 7.1e-35 151.4 190 59.5
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.6e-34 150.2 101 75.2
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 2.1e-34 149.8 190 54.2
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-34 149.4 175 51.4
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-34 149.4 173 56.6
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 4.6e-34 148.7 171 51.5
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 6.0e-34 148.3 170 51.2
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 6.0e-34 148.3 210 47.6
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 7.8e-34 147.9 156 53.2
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.0e-33 147.5 175 50.9
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.0e-33 147.5 175 50.9
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.7e-33 146.7 192 47.9
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 2.3e-33 146.4 202 50.0
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.9e-33 145.6 170 52.9
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.6e-33 144.8 170 54.7
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 6.6e-33 144.8 101 70.3
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 8.7e-33 144.4 163 51.5
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.1e-32 144.1 151 57.6
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.9e-32 143.3 143 62.9
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 2.5e-32 142.9 208 46.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 4.3e-32 142.1 104 67.3
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 9.6e-32 141.0 196 54.1
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.6e-31 140.2 203 51.2
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 2.1e-31 139.8 104 68.3
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 3.6e-31 139.0 189 54.5
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.8e-31 138.7 163 52.8
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.3e-28 130.6 103 65.0
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.2e-28 129.8 132 53.0
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.9e-28 129.4 168 46.4
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 8.4e-28 127.9 135 59.3
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.9e-27 126.7 101 59.4
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.4e-27 126.3 156 48.7
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 2.4e-27 126.3 177 44.6
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 7.1e-27 124.8 168 46.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 6.0e-26 121.7 107 54.2
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 2.3e-25 119.8 84 67.9
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 2.3e-25 119.8 107 52.3
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.5e-24 117.1 165 45.5
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 5.6e-24 115.2 102 55.9
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.5e-21 107.1 101 58.4
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 7.6e-21 104.8 71 69.0
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.3e-20 104.0 193 48.7
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.2e-18 97.4 169 40.8
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.3e-14 82.0 45 80.0
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.5e-13 80.5 53 69.8
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 1.5e-13 80.5 97 46.4
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 2.0e-13 80.1 97 44.3
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.6e-13 79.7 76 50.0
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 3.4e-13 79.3 144 38.2
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 3.4e-13 79.3 144 38.2
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 3.4e-13 79.3 159 41.5
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.4e-11 73.9 148 39.2
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 1.6e-10 70.5 135 39.3
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 2.1e-10 70.1 167 34.7
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.3e-09 67.4 60 60.0
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 3.0e-09 66.2 120 43.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.5e-08 63.9 62 56.5


User provided reference genes

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