Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 6.7e-140 500.7 267 100.0
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 9.9e-67 257.7 271 61.3
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 1.9e-49 200.3 319 47.0
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.3e-47 194.1 308 46.1
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 1.3e-42 177.6 293 46.8
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 3.6e-40 169.5 305 43.3
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 4.6e-40 169.1 305 43.0
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 4.1e-36 156.0 267 45.7
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 4.1e-28 129.4 301 38.9
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 5.3e-28 129.0 308 38.6
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 1.6e-27 127.5 305 38.7
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 1.3e-26 124.4 283 39.2
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 5.5e-25 119.0 276 38.0
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 7.2e-25 118.6 283 41.0
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 9.4e-25 118.2 305 38.0
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 9.4e-25 118.2 307 38.4
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 1.2e-24 117.9 316 36.7
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 1.6e-24 117.5 306 37.6
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 3.6e-24 116.3 260 40.0
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 3.6e-24 116.3 294 37.4
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 6.1e-24 115.5 282 38.3
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 1.4e-23 114.4 290 37.2
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.0e-23 113.2 289 37.7
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 5.2e-23 112.5 316 37.3
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 1.1e-22 111.3 249 41.0
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 3.3e-22 109.8 281 36.3
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 5.7e-22 109.0 306 36.9
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 5.7e-22 109.0 306 36.9
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 5.7e-22 109.0 306 36.9
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 5.7e-22 109.0 300 37.3
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 7.5e-22 108.6 269 37.9
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.3e-21 107.8 305 36.4
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 1.7e-21 107.5 283 39.2
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.7e-21 107.5 264 34.1
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 4.8e-21 105.9 303 38.0
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 8.2e-21 105.1 291 36.1
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 8.2e-21 105.1 300 33.3
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 4.1e-20 102.8 275 37.8
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 4.1e-20 102.8 310 34.8
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.6e-19 100.9 255 37.3
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 7.7e-19 98.6 296 33.4
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 7.7e-19 98.6 307 34.9
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 6.5e-18 95.5 307 35.8
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 1.5e-17 94.4 288 32.6
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 7.2e-17 92.0 268 36.6
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 7.2e-17 92.0 267 37.1
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.2e-16 91.3 265 31.7
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.6e-16 90.9 276 35.1
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 6.1e-16 89.0 246 39.0
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.0e-15 88.2 277 35.4
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 1.8e-15 87.4 299 35.1
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 3.0e-15 86.7 263 34.2
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 3.0e-15 86.7 326 33.1
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 1.2e-14 84.7 269 33.1
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 1.5e-14 84.3 274 35.0
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 2.0e-14 84.0 257 36.6
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 5.7e-14 82.4 293 35.8
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 5.7e-14 82.4 284 30.3
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 2.2e-13 80.5 309 34.3
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 8.3e-13 78.6 273 33.7
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 2.4e-12 77.0 244 36.1
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 7.0e-12 75.5 303 32.3
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 1.6e-11 74.3 219 35.6
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 2.7e-11 73.6 311 33.8
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 1.0e-10 71.6 144 36.8
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 2.9e-10 70.1 199 36.7
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 2.9e-10 70.1 272 32.0
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 2.9e-10 70.1 273 31.9
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 6.5e-10 68.9 267 33.7
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 4.2e-09 66.2 273 33.0
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 9.4e-09 65.1 261 34.1
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 1.6e-08 64.3 326 29.4
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 5.2e-07 59.3 253 32.4
HPP92_019364 Vanilla planifolia HOM05D007548 ORTHO05D009527 8.8e-07 58.5 218 32.6
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 1.2e-06 58.2 352 27.6
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 2.6e-06 57.0 338 30.2
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 7.5e-06 55.5 338 29.0


User provided reference genes

Program Settings