Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 3.0e-121 438.3 198 100.0
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 5.3e-81 304.7 196 73.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 5.8e-80 301.2 197 72.6
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.3e-79 300.1 190 73.7
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 4.9e-79 298.1 192 70.8
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 8.4e-79 297.4 186 74.7
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 2.4e-78 295.8 198 70.7
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 2.1e-77 292.7 192 71.9
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.7e-77 292.4 196 68.9
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 6.0e-77 291.2 196 69.4
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.0e-76 290.4 197 69.0
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.3e-76 289.3 196 69.4
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 2.3e-76 289.3 191 72.3
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.3e-76 289.3 196 69.4
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.0e-76 288.9 193 69.9
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.9e-76 288.5 192 69.3
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 6.6e-76 287.7 193 71.0
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.9e-75 286.2 193 70.5
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.3e-75 285.4 197 67.5
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.3e-75 285.4 197 67.5
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.3e-75 285.4 196 67.9
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 5.6e-75 284.6 197 67.5
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 5.6e-75 284.6 189 69.8
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 7.3e-75 284.3 197 67.0
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 7.3e-75 284.3 194 66.5
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.3e-74 283.5 192 67.7
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.3e-74 283.5 196 68.4
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.3e-74 283.5 189 71.4
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.6e-74 283.1 192 68.8
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-74 283.1 197 68.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-74 283.1 198 67.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 2.1e-74 282.7 192 68.8
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 2.1e-74 282.7 190 67.9
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.1e-74 282.7 197 67.5
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 2.1e-74 282.7 194 68.0
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 2.8e-74 282.3 192 68.2
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 3.6e-74 282.0 194 68.0
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 3.6e-74 282.0 193 69.4
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 3.6e-74 282.0 191 66.5
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 4.8e-74 281.6 196 69.4
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 4.8e-74 281.6 189 70.4
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 6.2e-74 281.2 192 67.7
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 6.2e-74 281.2 198 68.7
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 6.2e-74 281.2 192 66.7
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 8.1e-74 280.8 193 68.4
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 8.1e-74 280.8 192 68.2
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 8.1e-74 280.8 197 67.0
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.1e-73 280.4 201 66.7
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.1e-73 280.4 192 67.2
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.1e-73 280.4 190 66.8
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.4e-73 280.0 189 67.2
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 1.4e-73 280.0 190 66.8
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.4e-73 279.3 202 66.3
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.4e-73 279.3 191 67.0
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.1e-73 278.9 199 68.8
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 4.0e-73 278.5 204 64.7
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 6.9e-73 277.7 187 65.8
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.2e-72 276.9 190 67.9
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.0e-72 276.2 196 66.8
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 2.0e-72 276.2 187 67.9
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 2.0e-72 276.2 194 66.0
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.6e-72 275.8 194 70.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 2.6e-72 275.8 193 66.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.5e-72 275.0 191 68.1
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 5.8e-72 274.6 195 67.7
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 5.8e-72 274.6 197 66.0
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.6e-72 274.2 198 66.2
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 9.9e-72 273.9 191 67.0
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.7e-71 273.1 199 65.8
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 2.9e-71 272.3 193 65.3
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 8.4e-71 270.8 186 66.7
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.4e-70 270.0 193 64.2
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-70 270.0 192 65.6
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-70 270.0 192 65.6
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.9e-70 269.6 190 66.3
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.2e-70 268.9 182 68.7
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 3.2e-70 268.9 198 63.6
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 4.2e-70 268.5 192 67.2
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 9.3e-70 267.3 192 65.1
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.2e-69 266.9 187 66.3
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.6e-69 266.5 195 65.1
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 3.5e-69 265.4 189 65.1
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 7.9e-69 264.2 187 66.3
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.3e-68 263.5 184 67.9
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 1.3e-68 263.5 185 67.0
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.3e-68 263.5 192 65.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.9e-68 261.9 191 65.4
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 3.9e-68 261.9 191 61.8
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 5.1e-68 261.5 192 64.1
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 6.7e-68 261.2 183 64.5
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.5e-67 260.0 195 61.5
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.5e-67 260.0 194 61.3
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.9e-67 259.6 186 66.7
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 5.6e-67 258.1 187 62.6
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 8.1e-66 254.2 182 64.8
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.4e-65 253.4 195 66.7
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.4e-65 253.4 195 66.7
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.8e-65 253.1 159 71.7
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.8e-65 253.1 159 71.7
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.8e-65 253.1 189 62.4
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.2e-64 250.4 186 63.4
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.5e-64 248.4 189 59.8
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 7.6e-64 247.7 205 55.6
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 6.7e-60 234.6 188 61.2
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.5e-59 233.4 194 57.7
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 8.2e-58 227.6 161 66.5
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.4e-57 226.1 185 54.6
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 4.1e-57 225.3 192 54.2
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 3.4e-56 222.2 182 60.4
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 8.7e-52 207.6 167 60.5
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 1.9e-51 206.5 139 66.2
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 9.7e-51 204.1 147 63.3
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 3.7e-50 202.2 133 68.4
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 5.0e-47 191.8 191 46.6
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 4.7e-37 158.7 90 76.7
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 2.2e-34 149.8 81 71.6
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.0e-12 75.9 159 34.0
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 3.1e-09 66.2 61 42.6


User provided reference genes

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