Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01091 Striga asiatica HOM05D004879 ORTHO05D008271 1.8e-176 622.5 312 100.0
Dinv15026 Davidia involucrata HOM05D004879 ORTHO05D008271 3.5e-95 352.4 237 70.9
CiPaw.13G145200 Carya illinoinensis HOM05D004879 ORTHO05D008271 2.9e-94 349.4 240 69.6
CAN.G1097.5 Capsicum annuum HOM05D004879 ORTHO05D008271 3.2e-93 345.9 245 67.8
Haze_14485 Corylus avellana HOM05D004879 ORTHO05D008271 4.2e-93 345.5 240 70.8
Peaxi162Scf00192g00042 Petunia axillaris HOM05D004879 ORTHO05D008271 4.2e-93 345.5 227 70.9
Rhsim13G0203600 Rhododendron simsii HOM05D004879 ORTHO05D008271 5.5e-93 345.1 245 65.3
Solyc03g031430.1 Solanum lycopersicum HOM05D004879 ORTHO05D008271 7.2e-93 344.7 245 66.9
Sopen03g005320 Solanum pennellii HOM05D004879 ORTHO05D008271 7.2e-93 344.7 245 66.9
Cfa007603 Carpinus fangiana HOM05D004879 ORTHO05D008271 1.2e-92 344.0 240 71.2
Migut.F00393 Erythranthe guttata HOM05D004879 ORTHO05D008271 2.1e-92 343.2 243 70.4
Nitab4.5_0005379g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 2.7e-92 342.8 226 70.4
PGSC0003DMG400024255 Solanum tuberosum HOM05D004879 ORTHO05D008271 4.7e-92 342.0 228 69.3
Cc00_g20630 Coffea canephora HOM05D004879 ORTHO05D008271 6.1e-92 341.7 238 68.9
Potri.001G224400 Populus trichocarpa HOM05D004879 ORTHO05D008271 6.1e-92 341.7 245 67.8
Gorai.013G107000 Gossypium raimondii HOM05D004879 ORTHO05D008271 1.0e-91 340.9 244 67.2
QL01p020549 Quercus lobata HOM05D004879 ORTHO05D008271 1.0e-91 340.9 235 68.5
Sed0013542 Sechium edule HOM05D004879 ORTHO05D008271 1.0e-91 340.9 227 70.9
Lalb_Chr04g0249461 Lupinus albus HOM05D004879 ORTHO05D008271 1.4e-91 340.5 227 70.9
Psat0s2829g0160 Pisum sativum HOM05D004879 ORTHO05D008271 1.4e-91 340.5 238 69.7
PSO339G6668 Papaver somniferum HOM05D004879 ORTHO05D008271 1.8e-91 340.1 237 70.0
VMungo0647G0171 Vigna mungo HOM05D004879 ORTHO05D008271 1.8e-91 340.1 229 71.2
Gohir.D03G062100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 2.3e-91 339.7 244 66.8
Nitab4.5_0000832g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 2.3e-91 339.7 226 69.9
PSO384G4586 Papaver somniferum HOM05D004879 ORTHO05D008271 2.3e-91 339.7 237 69.6
Psat0s4349g0080 Pisum sativum HOM05D004879 ORTHO05D008271 2.3e-91 339.7 238 69.7
MELO3C004190.2 Cucumis melo HOM05D004879 ORTHO05D008271 3.0e-91 339.3 227 71.4
Glyma.02G276400 Glycine max HOM05D004879 ORTHO05D008271 4.0e-91 339.0 230 70.0
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.2e-90 337.4 259 63.7
Phvul.008G205100 Phaseolus vulgaris HOM05D004879 ORTHO05D008271 1.2e-90 337.4 227 71.4
Actinidia07011 Actinidia chinensis HOM05D004879 ORTHO05D008271 2.0e-90 336.7 240 69.6
Ca_06172_v3 Cicer arietinum L. HOM05D004879 ORTHO05D008271 2.0e-90 336.7 227 70.9
Ciclev10002295m.g Citrus clementina HOM05D004879 ORTHO05D008271 3.4e-90 335.9 222 71.2
CsaV3_2G007030 Cucumis sativus L. HOM05D004879 ORTHO05D008271 3.4e-90 335.9 222 71.6
Eucgr.B03769 Eucalyptus grandis HOM05D004879 ORTHO05D008271 3.4e-90 335.9 243 68.3
Duzib041G0713 Durio zibethinus HOM05D004879 ORTHO05D008271 9.8e-90 334.3 227 70.0
Gohir.A02G109100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 9.8e-90 334.3 223 70.9
Nn7g37079 Nelumbo nucifera HOM05D004879 ORTHO05D008271 9.8e-90 334.3 223 70.9
Manes.01G175400 Manihot esculenta HOM05D004879 ORTHO05D008271 1.3e-89 334.0 236 66.9
Sc06g0004840 Simmondsia chinensis HOM05D004879 ORTHO05D008271 2.2e-89 333.2 252 62.7
Lj1P989T20 Lonicera japonica HOM05D004879 ORTHO05D008271 2.8e-89 332.8 227 68.7
TPR.G14628 Trifolium pratense HOM05D004879 ORTHO05D008271 4.8e-89 332.0 240 67.5
unitig_37.g12512 Utricularia gibba HOM05D004879 ORTHO05D008271 4.8e-89 332.0 246 65.9
AL1G35040 Arabidopsis lyrata HOM05D004879 ORTHO05D008271 1.1e-88 330.9 226 69.9
FvH4_2g00490 Fragaria vesca HOM05D004879 ORTHO05D008271 1.1e-88 330.9 236 66.9
LjContig00564g0012926 Lotus japonicus HOM05D004879 ORTHO05D008271 1.1e-88 330.9 227 70.0
Sabra16G0133100 Salix brachista HOM05D004879 ORTHO05D008271 1.1e-88 330.9 245 66.1
Aqoxy1G01328 Aquilegia oxysepala HOM05D004879 ORTHO05D008271 1.4e-88 330.5 241 66.0
RcHm_v2.0_Chr6g0250481 Rosa chinensis HOM05D004879 ORTHO05D008271 1.8e-88 330.1 236 66.1
Thhalv10009605m.g Eutrema salsugineum HOM05D004879 ORTHO05D008271 2.4e-88 329.7 226 70.4
Carub.0001s2129 Capsella rubella HOM05D004879 ORTHO05D008271 3.1e-88 329.3 226 69.5
RcHm_v2.0_Chr6g0250811 Rosa chinensis HOM05D004879 ORTHO05D008271 3.1e-88 329.3 236 66.5
TWI31G0278 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 4.1e-88 328.9 223 70.0
CSS0042269 Camellia sinensis var. sinensis HOM05D004879 ORTHO05D008271 5.4e-88 328.6 226 69.9
Cpa.g.sc36.59 Carica papaya HOM05D004879 ORTHO05D008271 7.0e-88 328.2 222 69.8
ClCG02G014970 Citrullus lanatus HOM05D004879 ORTHO05D008271 7.0e-88 328.2 222 71.2
DCAR_018145 Daucus carota HOM05D004879 ORTHO05D008271 9.1e-88 327.8 241 65.6
Glyma.14G039400 Glycine max HOM05D004879 ORTHO05D008271 1.2e-87 327.4 230 68.3
Sp1g19390 Schrenkiella parvula HOM05D004879 ORTHO05D008271 1.2e-87 327.4 236 66.1
EL10Ac4g10052 Beta vulgaris HOM05D004879 ORTHO05D008271 2.7e-87 326.2 269 56.5
PGR102G1558 Punica granatum HOM05D004879 ORTHO05D008271 2.7e-87 326.2 242 66.1
CARHR022120 Cardamine hirsuta HOM05D004879 ORTHO05D008271 3.5e-87 325.9 224 69.6
CDE10G1192 Ceratophyllum demersum HOM05D004879 ORTHO05D008271 5.9e-87 325.1 240 65.8
MBI13_g10954_MAGBIO Magnolia biondii HOM05D004879 ORTHO05D008271 5.9e-87 325.1 225 68.9
Os02g0168000 Oryza sativa ssp. japonica HOM05D004879 ORTHO05D008271 1.3e-86 323.9 253 64.0
AT1G21840 Arabidopsis thaliana HOM05D004879 ORTHO05D008271 2.2e-86 323.2 226 68.6
AUR62000245 Chenopodium quinoa HOM05D004879 ORTHO05D008271 2.9e-86 322.8 242 61.2
COL.COLO4_35490 Corchorus olitorius HOM05D004879 ORTHO05D008271 5.0e-86 322.0 253 62.1
BraA07t29233Z Brassica rapa HOM05D004879 ORTHO05D008271 1.1e-85 320.9 227 68.7
TWI79G1014 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 1.5e-85 320.5 223 66.4
BcaB08g37376 Brassica carinata HOM05D004879 ORTHO05D008271 2.5e-85 319.7 226 68.6
BcaB08g37377 Brassica carinata HOM05D004879 ORTHO05D008271 2.5e-85 319.7 226 68.6
BcaC06g34908 Brassica carinata HOM05D004879 ORTHO05D008271 1.2e-84 317.4 227 68.3
A07p14910 Brassica napus HOM05D004879 ORTHO05D008271 1.2e-84 317.4 227 68.3
C07p21890 Brassica napus HOM05D004879 ORTHO05D008271 1.2e-84 317.4 227 68.3
C07p21910 Brassica napus HOM05D004879 ORTHO05D008271 1.2e-84 317.4 227 68.3
BolC7t42723H Brassica oleracea HOM05D004879 ORTHO05D008271 1.2e-84 317.4 227 68.3
ATR0782G197 Amborella trichopoda HOM05D004879 ORTHO05D008271 2.8e-84 316.2 235 64.7
FAN24G3181 Fragaria x ananassa HOM05D004879 ORTHO05D008271 2.8e-84 316.2 230 65.7
CANSAT54G0046 Cannabis sativa HOM05D004879 ORTHO05D008271 8.0e-84 314.7 228 67.1
ECA240G2819 Erigeron canadensis HOM05D004879 ORTHO05D008271 3.0e-83 312.8 219 68.0
Aa31LG7G5930 Aethionema arabicum HOM05D004879 ORTHO05D008271 1.2e-82 310.8 227 66.5
HPP92_011765 Vanilla planifolia HOM05D004879 ORTHO05D008271 2.2e-81 306.6 239 63.6
MD10G1003100 Malus domestica HOM05D004879 ORTHO05D008271 4.9e-81 305.4 277 58.1
Zm00001eb232950 Zea mays HOM05D004879 ORTHO05D008271 8.3e-81 304.7 225 66.7
BcaC06g34909 Brassica carinata HOM05D004879 ORTHO05D008271 3.1e-80 302.8 227 66.1
FAN27G1110 Fragaria x ananassa HOM05D004879 ORTHO05D008271 9.2e-80 301.2 224 64.7
Prupe.8G030900 Prunus persica HOM05D004879 ORTHO05D008271 2.7e-79 299.7 273 57.9
SalBow4G0907 Salvia bowleyana HOM05D004879 ORTHO05D008271 4.5e-79 298.9 246 63.8
MSTRG.8775 Avicennia marina HOM05D004879 ORTHO05D008271 5.6e-77 292.0 245 63.7
SEGI_07822 Sequoiadendron giganteum HOM05D004879 ORTHO05D008271 4.1e-72 275.8 223 59.6
Atru.chr3.2942 Acer truncatum HOM05D004879 ORTHO05D008271 1.0e-70 271.2 191 63.9
FAN06G1945 Fragaria x ananassa HOM05D004879 ORTHO05D008271 6.6e-70 268.5 195 65.6
MD12G1125200 Malus domestica HOM05D000005 ORTHO05D000012 1.9e-69 266.9 224 60.3
Hma1.2p1_1843F.1_g305050 Hydrangea macrophylla HOM05D004879 ORTHO05D008271 2.6e-66 256.5 173 73.4
SMO137G0182 Selaginella moellendorffii HOM05D004879 ORTHO05D008271 3.2e-64 249.6 222 58.1
Mapoly0075s0047 Marchantia polymorpha HOM05D004879 ORTHO05D008271 2.8e-60 236.5 222 51.4
MD12G1125400 Malus domestica HOM05D004879 ORTHO05D008271 1.8e-59 233.8 188 61.7
arahy.Tifrunner.gnm1.ann1.V07RCD Arachis hypogaea HOM05D004879 ORTHO05D008271 4.1e-56 222.6 227 52.4
arahy.Tifrunner.gnm1.ann1.WGUK12 Arachis hypogaea HOM05D004879 ORTHO05D008271 2.7e-55 219.9 227 51.1
Thecc.08G138700 Theobroma cacao HOM05D004879 ORTHO05D008271 1.9e-53 213.8 151 66.9
Pp3c21_1390 Physcomitrium patens HOM05D004879 ORTHO05D008271 3.3e-53 213.0 226 52.2
HPP92_011772 Vanilla planifolia HOM05D004879 ORTHO05D008271 2.2e-49 200.3 155 63.2
CBR_g70735 Chara braunii HOM05D004879 ORTHO05D008271 6.4e-49 198.7 281 41.3
Oeu030259.1 Olea europaea HOM05D004879 ORTHO05D008271 1.7e-46 190.7 242 45.0
RcHm_v2.0_Chr1g0323071 Rosa chinensis HOM05D004879 ORTHO05D008271 6.9e-43 178.7 139 62.6
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 8.9e-43 178.3 199 48.7
GSVIVG01037361001 Vitis vinifera HOM05D004879 ORTHO05D008271 2.0e-42 177.2 227 44.5
RcHm_v2.0_Chr1g0322261 Rosa chinensis HOM05D004879 ORTHO05D008271 2.1e-39 167.2 128 64.1
Actinidia37185 Actinidia chinensis HOM05D004879 ORTHO05D008271 1.7e-38 164.1 197 48.7
SHI10553 Sapria himalayana HOM05D004879 ORTHO05D008271 4.8e-36 156.0 222 40.5
MCO04G443 Micromonas commoda HOM05D004879 ORTHO05D008271 2.4e-32 143.7 265 35.8
CBR_g27954 Chara braunii HOM05D004879 ORTHO05D008271 1.9e-29 134.0 177 44.1
FAN24G2371 Fragaria x ananassa HOM05D004879 ORTHO05D000038 7.1e-24 115.5 106 53.8
RcHm_v2.0_Chr1g0322441 Rosa chinensis HOM05D004879 ORTHO05D008271 6.7e-22 109.0 79 64.6
RcHm_v2.0_Chr1g0322591 Rosa chinensis HOM05D004879 ORTHO05D008271 1.8e-19 100.9 69 66.7
RcHm_v2.0_Chr1g0322271 Rosa chinensis HOM05D004879 ORTHO05D008271 3.8e-17 93.2 60 70.0
RcHm_v2.0_Chr1g0322581 Rosa chinensis HOM05D004879 ORTHO05D008271 1.5e-13 81.3 64 57.8
RcHm_v2.0_Chr1g0322461 Rosa chinensis HOM05D004879 ORTHO05D008271 2.8e-12 77.0 47 72.3
arahy.Tifrunner.gnm1.ann1.0GE5DD Arachis hypogaea HOM05D004879 ORTHO05D008271 4.8e-12 76.3 51 66.7
arahy.Tifrunner.gnm1.ann1.4Q1DLP Arachis hypogaea HOM05D004879 ORTHO05D008271 3.2e-08 63.5 47 55.3
RcHm_v2.0_Chr1g0322541 Rosa chinensis HOM05D004879 ORTHO05D008271 1.2e-07 61.6 50 62.0
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 7.9e-07 58.9 139 28.8
Lj1P989T44 Lonicera japonica HOM05D001123 ORTHO05D000966 1.8e-06 57.8 134 34.3
unitig_21.g20527 Utricularia gibba HOM05D001123 ORTHO05D000966 3.9e-06 56.6 105 34.3
SGA_v2.0_scaffold221G42738 Striga asiatica HOM05D001123 ORTHO05D000966 6.7e-06 55.8 136 35.3


User provided reference genes

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